Wall clock time and date at job start Tue Mar 9 2021 13:37:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86298 * 109.47082 * 2 1 4 4 C 1.50698 * 109.47160 * 239.99761 * 2 1 3 5 5 C 1.38261 * 119.94859 * 300.00014 * 4 2 1 6 6 C 1.38149 * 120.05842 * 179.97438 * 5 4 2 7 7 C 1.38733 * 119.94171 * 0.02562 * 6 5 4 8 8 O 1.35896 * 120.05097 * 179.97438 * 7 6 5 9 9 C 1.42900 * 116.99812 * 180.02562 * 8 7 6 10 10 C 1.53003 * 109.47277 * 180.02562 * 9 8 7 11 11 C 1.50705 * 109.47127 * 179.97438 * 10 9 8 12 12 O 1.21275 * 119.99947 * 0.02562 * 11 10 9 13 13 N 1.34776 * 119.99715 * 180.02562 * 11 10 9 14 14 C 1.46505 * 119.99597 * 180.02562 * 13 11 10 15 15 H 1.09000 * 112.85296 * 23.80222 * 14 13 11 16 16 C 1.53781 * 113.61334 * 154.99978 * 14 13 11 17 17 C 1.53786 * 87.17350 * 89.07333 * 16 14 13 18 18 O 1.42907 * 113.61055 * 270.92744 * 17 16 14 19 19 C 1.52990 * 113.61464 * 140.02626 * 17 16 14 20 20 F 1.39897 * 109.47425 * 59.99764 * 19 17 16 21 21 F 1.39900 * 109.47354 * 179.97438 * 19 17 16 22 22 F 1.39899 * 109.47234 * 299.99577 * 19 17 16 23 23 C 1.53781 * 113.61146 * 252.49455 * 14 13 11 24 24 C 1.38728 * 119.88758 * 0.27578 * 7 6 5 25 25 C 1.38141 * 119.94401 * 359.42150 * 24 7 6 26 26 H 0.96697 * 113.99809 * 60.00053 * 1 2 3 27 27 H 1.09002 * 109.47218 * 119.99960 * 2 1 3 28 28 H 1.48501 * 109.99955 * 60.00245 * 3 2 1 29 29 H 1.48500 * 109.99942 * 181.31913 * 3 2 1 30 30 H 1.07998 * 119.97402 * 359.97438 * 5 4 2 31 31 H 1.08001 * 120.02582 * 180.02562 * 6 5 4 32 32 H 1.09002 * 109.47278 * 59.99972 * 9 8 7 33 33 H 1.09004 * 109.47430 * 300.00214 * 9 8 7 34 34 H 1.09000 * 109.47069 * 60.00494 * 10 9 8 35 35 H 1.08993 * 109.47053 * 299.99877 * 10 9 8 36 36 H 0.96995 * 120.00232 * 359.97438 * 13 11 10 37 37 H 1.09002 * 113.61445 * 203.66333 * 16 14 13 38 38 H 1.09002 * 113.61408 * 334.48063 * 16 14 13 39 39 H 0.96698 * 113.99817 * 179.97438 * 18 17 16 40 40 H 1.09005 * 113.61471 * 25.43638 * 23 14 13 41 41 H 1.08996 * 113.61178 * 156.24980 * 23 14 13 42 42 H 1.08005 * 120.02224 * 179.72334 * 24 7 6 43 43 H 1.08005 * 119.96911 * 180.32451 * 25 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.5967 -2.0342 -1.4481 6 6 2.0555 -2.6875 -2.5756 7 6 2.8532 -2.0143 -3.4895 8 8 3.3062 -2.6550 -4.5990 9 6 4.1231 -1.9000 -5.4960 10 6 4.5337 -2.7819 -6.6770 11 6 5.3947 -1.9854 -7.6233 12 8 5.6548 -0.8267 -7.3771 13 7 5.8757 -2.5608 -8.7431 14 6 6.7132 -1.7866 -9.6627 15 1 7.2107 -0.9470 -9.1772 16 6 7.6563 -2.6527 -10.5143 17 6 6.5179 -2.7451 -11.5441 18 8 5.6311 -3.8431 -11.3202 19 6 6.9947 -2.6509 -12.9948 20 9 7.8850 -3.6964 -13.2619 21 9 5.8948 -2.7447 -13.8542 22 9 7.6402 -1.4260 -13.1949 23 6 6.0030 -1.4099 -10.9737 24 6 3.1927 -0.6880 -3.2656 25 6 2.7262 -0.0374 -2.1398 26 1 -0.3933 0.4417 -0.7650 27 1 1.7924 -0.5138 0.8900 28 1 1.5615 2.4678 1.2085 29 1 3.5346 1.7703 -0.0321 30 1 0.9761 -2.5579 -0.7362 31 1 1.7934 -3.7214 -2.7453 32 1 5.0148 -1.5550 -4.9725 33 1 3.5618 -1.0405 -5.8627 34 1 3.6418 -3.1263 -7.2005 35 1 5.0948 -3.6414 -6.3107 36 1 5.6680 -3.4876 -8.9398 37 1 8.5322 -2.1160 -10.8787 38 1 7.9068 -3.6083 -10.0535 39 1 4.9128 -3.9063 -11.9644 40 1 4.9176 -1.3627 -10.8843 41 1 6.4260 -0.5325 -11.4628 42 1 3.8173 -0.1632 -3.9734 43 1 2.9860 0.9967 -1.9678 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_4549602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:12 Heat of formation + Delta-G solvation = -246.399035 kcal Electronic energy + Delta-G solvation = -31706.464220 eV Core-core repulsion = 26497.860815 eV Total energy + Delta-G solvation = -5208.603406 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -51.24472 -48.79141 -48.72567 -41.67750 -41.23982 -40.02595 -39.10426 -37.16929 -36.44257 -34.27342 -33.18134 -32.01582 -31.39516 -28.82648 -27.16387 -26.64071 -25.67100 -24.12934 -23.38220 -22.24331 -21.59687 -20.97235 -20.06448 -19.55306 -19.46973 -19.41578 -18.33460 -17.76471 -17.47328 -17.27739 -16.98424 -16.89465 -16.40867 -16.16095 -16.01046 -15.89500 -15.60430 -15.58930 -15.36936 -15.16919 -14.96943 -14.90751 -14.78921 -14.72909 -14.66940 -14.42054 -14.29236 -14.16424 -13.81987 -13.64408 -13.51775 -12.96149 -12.86430 -12.79632 -12.60557 -12.19667 -12.03854 -11.90632 -11.77666 -11.68620 -11.22708 -11.08933 -10.41777 -10.20307 -10.04251 -9.20488 -5.00935 0.28421 0.30828 1.32629 1.48152 1.51486 1.61985 1.66016 1.95004 2.34119 2.49204 2.59077 2.66452 2.66648 2.86129 3.39878 3.47466 3.53691 3.55023 3.58210 3.72313 3.83665 3.89772 3.92034 4.02898 4.24613 4.26497 4.34883 4.44907 4.47343 4.49084 4.51058 4.64669 4.69284 4.69576 4.75414 4.77966 4.80631 4.97754 5.18286 5.28842 5.43446 5.49796 5.72403 6.24831 6.32874 6.46380 6.78906 7.13017 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.066 4.066 3 Si 0.770 3.230 4 C -0.162 4.162 5 C -0.060 4.060 6 C -0.159 4.159 7 C 0.123 3.877 8 O -0.322 6.322 9 C 0.072 3.928 10 C -0.133 4.133 11 C 0.525 3.475 12 O -0.578 6.578 13 N -0.696 5.696 14 C 0.129 3.871 15 H 0.109 0.891 16 C -0.122 4.122 17 C 0.070 3.930 18 O -0.516 6.516 19 C 0.431 3.569 20 F -0.185 7.185 21 F -0.187 7.187 22 F -0.178 7.178 23 C -0.164 4.164 24 C -0.209 4.209 25 C -0.080 4.080 26 H 0.395 0.605 27 H 0.107 0.893 28 H -0.299 1.299 29 H -0.288 1.288 30 H 0.139 0.861 31 H 0.141 0.859 32 H 0.065 0.935 33 H 0.069 0.931 34 H 0.127 0.873 35 H 0.125 0.875 36 H 0.420 0.580 37 H 0.131 0.869 38 H 0.106 0.894 39 H 0.405 0.595 40 H 0.096 0.904 41 H 0.119 0.881 42 H 0.141 0.859 43 H 0.144 0.856 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.759 -1.322 -3.492 3.810 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.176 4.176 3 Si 0.677 3.323 4 C -0.162 4.162 5 C -0.078 4.078 6 C -0.177 4.177 7 C 0.078 3.922 8 O -0.236 6.236 9 C -0.003 4.003 10 C -0.173 4.173 11 C 0.312 3.688 12 O -0.458 6.458 13 N -0.349 5.349 14 C 0.023 3.977 15 H 0.127 0.873 16 C -0.159 4.159 17 C 0.026 3.974 18 O -0.325 6.325 19 C 0.377 3.623 20 F -0.166 7.166 21 F -0.168 7.168 22 F -0.160 7.160 23 C -0.203 4.203 24 C -0.227 4.227 25 C -0.098 4.098 26 H 0.245 0.755 27 H 0.124 0.876 28 H -0.227 1.227 29 H -0.216 1.216 30 H 0.157 0.843 31 H 0.159 0.841 32 H 0.084 0.916 33 H 0.088 0.912 34 H 0.145 0.855 35 H 0.143 0.857 36 H 0.259 0.741 37 H 0.149 0.851 38 H 0.125 0.875 39 H 0.258 0.742 40 H 0.114 0.886 41 H 0.137 0.863 42 H 0.159 0.841 43 H 0.161 0.839 Dipole moment (debyes) X Y Z Total from point charges 0.352 -0.555 -1.986 2.092 hybrid contribution -0.094 -0.758 -0.916 1.192 sum 0.258 -1.312 -2.902 3.195 Atomic orbital electron populations 1.86455 1.17281 1.82146 1.50509 1.25044 0.85211 1.10356 0.97032 0.93765 0.77800 0.75898 0.84829 1.20323 1.02006 0.95688 0.98217 1.20962 0.97098 0.93693 0.96042 1.20671 1.00995 1.01553 0.94524 1.19172 0.94484 0.91453 0.87097 1.85958 1.65236 1.40793 1.31574 1.22470 0.94158 0.94205 0.89473 1.21430 1.01956 0.99553 0.94327 1.20605 0.79548 0.86935 0.81690 1.90742 1.60297 1.19029 1.75699 1.45581 1.51271 1.16529 1.21481 1.21578 0.91637 0.95344 0.89124 0.87315 1.23583 0.95757 1.03145 0.93440 1.23667 0.95716 0.91408 0.86637 1.86501 1.42750 1.46623 1.56653 1.21531 0.75641 0.73615 0.91542 1.93209 1.69702 1.58513 1.95223 1.93181 1.53896 1.95845 1.73918 1.93186 1.82334 1.44496 1.95939 1.24272 1.03647 0.95911 0.96469 1.21424 1.05799 0.94443 1.01072 1.20998 0.95916 0.99814 0.93039 0.75528 0.87595 1.22685 1.21557 0.84337 0.84098 0.91626 0.91246 0.85523 0.85700 0.74146 0.85110 0.87529 0.74155 0.88591 0.86289 0.84086 0.83903 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.45 12.77 -148.98 -1.90 -2.36 16 2 C -0.07 -0.03 2.82 71.24 0.20 0.17 16 3 Si 0.77 -0.77 29.78 68.60 2.04 1.27 16 4 C -0.16 -0.22 5.39 -19.85 -0.11 -0.33 16 5 C -0.06 -0.12 9.60 22.25 0.21 0.09 16 6 C -0.16 -0.42 9.99 22.37 0.22 -0.20 16 7 C 0.12 0.43 6.69 22.51 0.15 0.58 16 8 O -0.32 -0.76 10.14 -92.38 -0.94 -1.70 16 9 C 0.07 -0.05 4.03 71.98 0.29 0.24 16 10 C -0.13 0.75 6.07 29.85 0.18 0.93 16 11 C 0.52 -0.80 7.83 87.66 0.69 -0.11 16 12 O -0.58 -3.89 15.58 -3.01 -0.05 -3.94 16 13 N -0.70 4.01 5.15 -440.03 -2.27 1.74 16 14 C 0.13 -0.68 4.32 45.52 0.20 -0.48 16 15 H 0.11 -0.27 7.46 -2.39 -0.02 -0.29 16 16 C -0.12 0.90 7.00 31.12 0.22 1.11 16 17 C 0.07 -0.44 1.37 -10.18 -0.01 -0.46 16 18 O -0.52 4.15 12.14 -148.98 -1.81 2.34 16 19 C 0.43 -0.95 2.86 71.98 0.21 -0.75 16 20 F -0.19 -0.21 17.18 44.97 0.77 0.56 16 21 F -0.19 0.18 16.65 44.97 0.75 0.92 16 22 F -0.18 0.15 15.77 44.97 0.71 0.86 16 23 C -0.16 1.05 7.16 31.21 0.22 1.27 16 24 C -0.21 -0.43 9.04 22.36 0.20 -0.23 16 25 C -0.08 -0.06 8.66 22.25 0.19 0.13 16 26 H 0.39 -2.79 8.70 -74.06 -0.64 -3.43 16 27 H 0.11 0.15 7.96 -2.39 -0.02 0.14 16 28 H -0.30 -1.89 7.11 99.48 0.71 -1.18 16 29 H -0.29 -1.13 7.11 99.48 0.71 -0.42 16 30 H 0.14 0.05 8.06 -2.91 -0.02 0.02 16 31 H 0.14 0.03 8.06 -2.91 -0.02 0.01 16 32 H 0.07 0.04 7.61 -2.39 -0.02 0.03 16 33 H 0.07 0.00 7.63 -2.39 -0.02 -0.02 16 34 H 0.13 -1.15 8.14 -2.39 -0.02 -1.17 16 35 H 0.12 -1.09 8.14 -2.39 -0.02 -1.11 16 36 H 0.42 -3.88 7.59 -92.71 -0.70 -4.58 16 37 H 0.13 -1.18 7.88 -2.39 -0.02 -1.20 16 38 H 0.11 -0.85 8.14 -2.39 -0.02 -0.87 16 39 H 0.41 -5.20 8.43 -74.06 -0.62 -5.82 16 40 H 0.10 -0.60 8.14 -2.38 -0.02 -0.62 16 41 H 0.12 -0.81 7.15 -2.39 -0.02 -0.83 16 42 H 0.14 0.00 6.30 -2.91 -0.02 -0.02 16 43 H 0.14 -0.45 4.87 -2.91 -0.01 -0.46 16 Total: 0.00 -19.67 372.47 -0.45 -20.12 By element: Atomic # 1 Polarization: -20.99 SS G_CDS: -0.82 Total: -21.82 kcal Atomic # 6 Polarization: -1.07 SS G_CDS: 3.06 Total: 1.99 kcal Atomic # 7 Polarization: 4.01 SS G_CDS: -2.27 Total: 1.74 kcal Atomic # 8 Polarization: -0.96 SS G_CDS: -4.69 Total: -5.66 kcal Atomic # 9 Polarization: 0.11 SS G_CDS: 2.23 Total: 2.34 kcal Atomic # 14 Polarization: -0.77 SS G_CDS: 2.04 Total: 1.27 kcal Total: -19.67 -0.45 -20.12 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_4549602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -226.276 kcal (2) G-P(sol) polarization free energy of solvation -19.675 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -245.951 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.123 kcal (6) G-S(sol) free energy of system = (1) + (5) -246.399 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds