Wall clock time and date at job start Tue Mar 9 2021 13:37:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86303 * 109.47318 * 2 1 4 4 C 1.50703 * 109.46847 * 240.00019 * 2 1 3 5 5 C 1.38245 * 119.97092 * 120.00341 * 4 2 1 6 6 C 1.38283 * 120.11012 * 179.97438 * 5 4 2 7 7 C 1.38121 * 120.05809 * 0.04403 * 6 5 4 8 8 C 1.38751 * 119.94246 * 359.97438 * 7 6 5 9 9 O 1.35905 * 120.05870 * 180.02562 * 8 7 6 10 10 C 1.42901 * 116.99604 * 0.02562 * 9 8 7 11 11 C 1.52998 * 109.47046 * 179.97438 * 10 9 8 12 12 C 1.52998 * 109.47242 * 179.97438 * 11 10 9 13 13 C 1.50703 * 109.47564 * 180.02562 * 12 11 10 14 14 O 1.21283 * 119.99340 * 0.02562 * 13 12 11 15 15 N 1.34768 * 120.00287 * 179.97438 * 13 12 11 16 16 C 1.46500 * 120.00015 * 179.97438 * 15 13 12 17 17 H 1.08997 * 112.85006 * 336.19497 * 16 15 13 18 18 C 1.53786 * 113.61485 * 107.50471 * 16 15 13 19 19 C 1.53775 * 87.08124 * 89.11693 * 18 16 15 20 20 O 1.42900 * 113.61277 * 270.88351 * 19 18 16 21 21 C 1.53001 * 113.69047 * 139.99555 * 19 18 16 22 22 F 1.39901 * 109.47025 * 322.46188 * 21 19 18 23 23 F 1.39896 * 109.47564 * 82.45905 * 21 19 18 24 24 F 1.39899 * 109.47109 * 202.46426 * 21 19 18 25 25 C 1.53781 * 87.08370 * 25.43269 * 19 18 16 26 26 C 1.38163 * 119.97099 * 300.29680 * 4 2 1 27 27 H 0.96704 * 113.99581 * 59.99545 * 1 2 3 28 28 H 1.09000 * 109.47276 * 120.00209 * 2 1 3 29 29 H 1.48503 * 109.99754 * 298.67991 * 3 2 1 30 30 H 1.48498 * 109.99935 * 60.00022 * 3 2 1 31 31 H 1.08001 * 119.94243 * 359.97438 * 5 4 2 32 32 H 1.08007 * 119.97266 * 180.02562 * 6 5 4 33 33 H 1.08002 * 120.02792 * 179.97438 * 7 6 5 34 34 H 1.08996 * 109.47352 * 299.99771 * 10 9 8 35 35 H 1.08999 * 109.47144 * 59.99795 * 10 9 8 36 36 H 1.08998 * 109.47592 * 300.00144 * 11 10 9 37 37 H 1.09007 * 109.46935 * 60.00317 * 11 10 9 38 38 H 1.09004 * 109.47100 * 299.99832 * 12 11 10 39 39 H 1.09004 * 109.47445 * 59.99792 * 12 11 10 40 40 H 0.97004 * 120.00223 * 359.97438 * 15 13 12 41 41 H 1.09002 * 113.61091 * 203.66646 * 18 16 15 42 42 H 1.09005 * 113.61343 * 334.56669 * 18 16 15 43 43 H 0.96705 * 114.00155 * 277.49914 * 20 19 18 44 44 H 1.08996 * 113.61650 * 220.01912 * 25 19 18 45 45 H 1.09003 * 113.61197 * 89.11554 * 25 19 18 46 46 H 1.07998 * 120.02998 * 0.02562 * 26 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.7260 -0.0380 -2.1401 6 6 3.1889 -0.6873 -3.2699 7 6 2.8573 -2.0094 -3.4927 8 6 2.0595 -2.6864 -2.5815 9 8 1.7322 -3.9875 -2.7982 10 6 2.2450 -4.5964 -3.9849 11 6 1.7749 -6.0507 -4.0559 12 6 2.3234 -6.7025 -5.3268 13 6 1.8599 -8.1348 -5.3972 14 8 1.1594 -8.5892 -4.5175 15 7 2.2229 -8.9102 -6.4379 16 6 1.7728 -10.3027 -6.5059 17 1 1.5251 -10.7156 -5.5281 18 6 0.6930 -10.5497 -7.5727 19 6 1.8411 -10.8167 -8.5602 20 8 2.3047 -9.6427 -9.2301 21 6 1.5708 -11.9793 -9.5174 22 9 0.8874 -12.9935 -8.8380 23 9 0.7923 -11.5296 -10.5892 24 9 2.7855 -12.4780 -10.0002 25 6 2.6936 -11.2076 -7.3414 26 6 1.5920 -2.0314 -1.4517 27 1 -0.3933 0.4418 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5879 2.4585 -1.2243 30 1 1.5615 2.4679 1.2085 31 1 2.9858 0.9960 -1.9680 32 1 3.8101 -0.1599 -3.9789 33 1 3.2188 -2.5159 -4.3755 34 1 1.8818 -4.0539 -4.8577 35 1 3.3344 -4.5676 -3.9665 36 1 2.1383 -6.5931 -3.1831 37 1 0.6854 -6.0799 -4.0742 38 1 1.9595 -6.1600 -6.1995 39 1 3.4129 -6.6732 -5.3092 40 1 2.7822 -8.5464 -7.1420 41 1 0.0753 -11.4255 -7.3740 42 1 0.1068 -9.6629 -7.8141 43 1 1.7725 -9.3917 -9.9976 44 1 3.7225 -10.8521 -7.3961 45 1 2.6228 -12.2634 -7.0796 46 1 0.9668 -2.5547 -0.7434 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_4549616.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:18 Heat of formation + Delta-G solvation = -253.194879 kcal Electronic energy + Delta-G solvation = -33312.313069 eV Core-core repulsion = 27947.877355 eV Total energy + Delta-G solvation = -5364.435714 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.138 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -51.25441 -48.80159 -48.73345 -41.62205 -41.24537 -40.01523 -39.19033 -37.41849 -36.45299 -34.89687 -34.04651 -32.45800 -31.23075 -29.15981 -28.00355 -27.17964 -26.81673 -24.40341 -23.68188 -23.30425 -21.91297 -21.50014 -20.96126 -20.04944 -19.54693 -19.42590 -19.21138 -18.14678 -17.91192 -17.45673 -17.21951 -17.12427 -17.00298 -16.76948 -16.42102 -16.16729 -16.02198 -15.61854 -15.53108 -15.42358 -15.17911 -15.06981 -14.92026 -14.91908 -14.77162 -14.72184 -14.62552 -14.24686 -14.11094 -13.90598 -13.74820 -13.27410 -13.22112 -13.07756 -12.92159 -12.72274 -12.60857 -12.31591 -12.27691 -11.94121 -11.90863 -11.59381 -11.54946 -11.23704 -10.99525 -10.68265 -10.16779 -9.90911 -9.23193 -4.90742 0.22749 0.42402 1.29808 1.50488 1.56969 1.62209 1.86862 1.97294 2.30210 2.45249 2.57579 2.65329 2.69126 2.85543 3.39171 3.40091 3.46737 3.53379 3.63922 3.68433 3.86225 3.89852 3.99524 4.12553 4.20212 4.24521 4.26653 4.36558 4.42247 4.45545 4.46255 4.49654 4.56505 4.63023 4.67912 4.69310 4.75966 4.81008 5.00500 5.02262 5.17689 5.30365 5.40179 5.46620 5.47940 5.76129 6.24798 6.44430 6.46028 6.53287 7.22616 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.551 6.551 2 C -0.092 4.092 3 Si 0.782 3.218 4 C -0.083 4.083 5 C -0.160 4.160 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.116 3.884 9 O -0.339 6.339 10 C 0.057 3.943 11 C -0.101 4.101 12 C -0.127 4.127 13 C 0.513 3.487 14 O -0.586 6.586 15 N -0.698 5.698 16 C 0.127 3.873 17 H 0.103 0.897 18 C -0.166 4.166 19 C 0.073 3.927 20 O -0.515 6.515 21 C 0.431 3.569 22 F -0.179 7.179 23 F -0.187 7.187 24 F -0.184 7.184 25 C -0.120 4.120 26 C -0.152 4.152 27 H 0.386 0.614 28 H 0.121 0.879 29 H -0.279 1.279 30 H -0.304 1.304 31 H 0.148 0.852 32 H 0.159 0.841 33 H 0.154 0.846 34 H 0.082 0.918 35 H 0.085 0.915 36 H 0.061 0.939 37 H 0.059 0.941 38 H 0.127 0.873 39 H 0.128 0.872 40 H 0.420 0.580 41 H 0.116 0.884 42 H 0.094 0.906 43 H 0.405 0.595 44 H 0.108 0.892 45 H 0.129 0.871 46 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.411 2.903 -5.887 9.175 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.359 6.359 2 C -0.200 4.200 3 Si 0.687 3.313 4 C -0.083 4.083 5 C -0.177 4.177 6 C -0.090 4.090 7 C -0.224 4.224 8 C 0.071 3.929 9 O -0.253 6.253 10 C -0.017 4.017 11 C -0.140 4.140 12 C -0.167 4.167 13 C 0.301 3.699 14 O -0.465 6.465 15 N -0.351 5.351 16 C 0.021 3.979 17 H 0.121 0.879 18 C -0.205 4.205 19 C 0.029 3.971 20 O -0.324 6.324 21 C 0.377 3.623 22 F -0.160 7.160 23 F -0.168 7.168 24 F -0.166 7.166 25 C -0.158 4.158 26 C -0.171 4.171 27 H 0.235 0.765 28 H 0.139 0.861 29 H -0.205 1.205 30 H -0.233 1.233 31 H 0.165 0.835 32 H 0.177 0.823 33 H 0.171 0.829 34 H 0.100 0.900 35 H 0.103 0.897 36 H 0.080 0.920 37 H 0.078 0.922 38 H 0.145 0.855 39 H 0.146 0.854 40 H 0.259 0.741 41 H 0.135 0.865 42 H 0.113 0.887 43 H 0.258 0.742 44 H 0.127 0.873 45 H 0.147 0.853 46 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 6.128 2.909 -4.205 7.981 hybrid contribution -1.713 -0.684 -1.519 2.389 sum 4.416 2.225 -5.725 7.564 Atomic orbital electron populations 1.86574 1.18661 1.80523 1.50119 1.25434 0.83442 1.12672 0.98470 0.93893 0.90116 0.70917 0.76402 1.20142 0.97861 0.93393 0.96933 1.21184 1.00349 1.00874 0.95333 1.21308 0.97414 0.93525 0.96803 1.21607 1.02703 0.96853 1.01216 1.19203 0.95217 0.83585 0.94930 1.86055 1.71653 1.22845 1.44763 1.22995 0.99737 0.93150 0.85810 1.21151 1.01562 0.92962 0.98281 1.21529 1.04705 0.90503 0.99932 1.21178 0.78956 0.89201 0.80565 1.90744 1.39562 1.75934 1.40290 1.45631 1.53355 1.10920 1.25159 1.21553 0.94408 0.82689 0.99244 0.87904 1.24226 0.96743 1.05024 0.94499 1.23580 1.00332 0.83677 0.89543 1.86495 1.57571 1.40082 1.48233 1.21538 0.74026 0.85608 0.81170 1.93186 1.80317 1.62956 1.79588 1.93179 1.75805 1.88842 1.58999 1.93210 1.44982 1.89118 1.89247 1.23570 1.00565 1.02396 0.89257 1.20316 1.04076 0.94912 0.97775 0.76482 0.86143 1.20491 1.23283 0.83497 0.82325 0.82883 0.89957 0.89728 0.92018 0.92201 0.85518 0.85392 0.74129 0.86549 0.88721 0.74164 0.87344 0.85284 0.86664 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.83 12.76 -148.98 -1.90 -4.73 16 2 C -0.09 -0.13 2.82 71.24 0.20 0.07 16 3 Si 0.78 -1.39 29.79 68.60 2.04 0.66 16 4 C -0.08 -0.18 5.39 -19.88 -0.11 -0.29 16 5 C -0.16 0.24 8.67 22.28 0.19 0.44 16 6 C -0.07 0.22 10.04 22.25 0.22 0.45 16 7 C -0.21 0.24 9.04 22.36 0.20 0.44 16 8 C 0.12 0.52 6.69 22.51 0.15 0.67 16 9 O -0.34 -1.87 10.14 -92.48 -0.94 -2.81 16 10 C 0.06 -0.17 4.74 71.98 0.34 0.17 16 11 C -0.10 0.09 4.87 30.59 0.15 0.24 16 12 C -0.13 0.95 5.70 29.85 0.17 1.12 16 13 C 0.51 -0.11 7.83 87.66 0.69 0.57 16 14 O -0.59 -5.97 15.58 -3.04 -0.05 -6.02 16 15 N -0.70 3.51 5.15 -440.04 -2.27 1.25 16 16 C 0.13 -0.49 4.32 45.52 0.20 -0.29 16 17 H 0.10 -0.01 7.46 -2.39 -0.02 -0.03 16 18 C -0.17 0.85 7.15 31.12 0.22 1.07 16 19 C 0.07 -0.42 1.36 -10.27 -0.01 -0.44 16 20 O -0.51 4.17 12.14 -148.98 -1.81 2.36 16 21 C 0.43 -0.76 2.85 71.98 0.21 -0.56 16 22 F -0.18 0.01 15.76 44.97 0.71 0.72 16 23 F -0.19 0.11 16.65 44.97 0.75 0.86 16 24 F -0.18 -0.24 17.18 44.97 0.77 0.54 16 25 C -0.12 0.80 7.01 31.12 0.22 1.02 16 26 C -0.15 -0.92 9.55 22.37 0.21 -0.71 16 27 H 0.39 -0.31 8.70 -74.05 -0.64 -0.95 16 28 H 0.12 0.07 7.96 -2.39 -0.02 0.05 16 29 H -0.28 -0.35 7.11 99.48 0.71 0.35 16 30 H -0.30 -1.86 7.11 99.48 0.71 -1.15 16 31 H 0.15 -0.88 4.87 -2.91 -0.01 -0.89 16 32 H 0.16 -1.43 8.06 -2.91 -0.02 -1.46 16 33 H 0.15 -1.03 6.30 -2.91 -0.02 -1.04 16 34 H 0.08 -0.56 7.66 -2.39 -0.02 -0.58 16 35 H 0.08 -0.60 7.66 -2.39 -0.02 -0.61 16 36 H 0.06 0.22 8.10 -2.39 -0.02 0.20 16 37 H 0.06 0.22 8.10 -2.38 -0.02 0.20 16 38 H 0.13 -1.59 8.14 -2.39 -0.02 -1.61 16 39 H 0.13 -1.63 8.14 -2.38 -0.02 -1.64 16 40 H 0.42 -3.96 7.59 -92.71 -0.70 -4.66 16 41 H 0.12 -0.60 7.14 -2.39 -0.02 -0.62 16 42 H 0.09 -0.46 8.14 -2.38 -0.02 -0.48 16 43 H 0.41 -5.24 8.42 -74.05 -0.62 -5.86 16 44 H 0.11 -0.83 8.14 -2.39 -0.02 -0.85 16 45 H 0.13 -1.04 7.88 -2.39 -0.02 -1.06 16 46 H 0.12 0.99 8.06 -2.91 -0.02 0.96 16 Total: 0.00 -24.68 393.93 -0.30 -24.97 By element: Atomic # 1 Polarization: -20.88 SS G_CDS: -0.86 Total: -21.74 kcal Atomic # 6 Polarization: 0.70 SS G_CDS: 3.25 Total: 3.95 kcal Atomic # 7 Polarization: 3.51 SS G_CDS: -2.27 Total: 1.25 kcal Atomic # 8 Polarization: -6.51 SS G_CDS: -4.69 Total: -11.21 kcal Atomic # 9 Polarization: -0.12 SS G_CDS: 2.23 Total: 2.11 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: 2.04 Total: 0.66 kcal Total: -24.68 -0.30 -24.97 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_4549616.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -228.221 kcal (2) G-P(sol) polarization free energy of solvation -24.676 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -252.897 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.298 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.974 kcal (6) G-S(sol) free energy of system = (1) + (5) -253.195 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds