Wall clock time and date at job start Tue Mar 9 2021 13:37:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47146 * 2 1 4 4 C 1.50695 * 109.46955 * 239.99761 * 2 1 3 5 5 C 1.38269 * 119.94415 * 119.73327 * 4 2 1 6 6 C 1.38139 * 120.05471 * 179.72264 * 5 4 2 7 7 C 1.38738 * 119.94542 * 0.56541 * 6 5 4 8 8 O 1.35901 * 120.05411 * 179.68247 * 7 6 5 9 9 C 1.42895 * 117.00357 * 0.02562 * 8 7 6 10 10 C 1.50702 * 109.47207 * 180.02562 * 9 8 7 11 11 C 1.36413 * 125.80045 * 89.99856 * 10 9 8 12 12 C 1.47382 * 127.19303 * 359.95796 * 11 10 9 13 13 O 1.21609 * 119.99907 * 0.02562 * 12 11 10 14 14 N 1.34773 * 119.99750 * 179.97438 * 12 11 10 15 15 C 1.46511 * 119.99820 * 180.02562 * 14 12 11 16 16 H 1.08999 * 112.84633 * 336.20045 * 15 14 12 17 17 C 1.53777 * 113.61197 * 107.50735 * 15 14 12 18 18 C 1.53775 * 87.08364 * 89.11502 * 17 15 14 19 19 O 1.42902 * 113.69569 * 270.87088 * 18 17 15 20 20 C 1.53003 * 113.61543 * 139.97783 * 18 17 15 21 21 F 1.39900 * 109.47182 * 322.50469 * 20 18 17 22 22 F 1.39897 * 109.47124 * 82.50494 * 20 18 17 23 23 F 1.39904 * 109.47084 * 202.50564 * 20 18 17 24 24 C 1.53778 * 113.61157 * 205.00250 * 15 14 12 25 25 C 1.47018 * 105.61535 * 179.97438 * 11 10 9 26 26 C 1.34175 * 105.95387 * 0.02562 * 25 11 10 27 27 O 1.33649 * 125.80041 * 269.69410 * 10 9 8 28 28 C 1.38733 * 119.88720 * 359.70862 * 7 6 5 29 29 C 1.38148 * 119.94241 * 359.97438 * 28 7 6 30 30 H 0.96700 * 113.99995 * 60.00040 * 1 2 3 31 31 H 1.09001 * 109.46621 * 119.99651 * 2 1 3 32 32 H 1.48501 * 109.99832 * 298.67587 * 3 2 1 33 33 H 1.48498 * 109.99998 * 59.99906 * 3 2 1 34 34 H 1.07994 * 119.97035 * 359.97178 * 5 4 2 35 35 H 1.07997 * 120.02858 * 180.24623 * 6 5 4 36 36 H 1.09005 * 109.46922 * 300.00165 * 9 8 7 37 37 H 1.08992 * 109.46834 * 59.99917 * 9 8 7 38 38 H 0.97000 * 120.00470 * 0.02562 * 14 12 11 39 39 H 1.09000 * 113.61481 * 203.66539 * 17 15 14 40 40 H 1.09004 * 113.61512 * 334.56906 * 17 15 14 41 41 H 0.96698 * 113.99907 * 277.54093 * 19 18 17 42 42 H 1.08995 * 113.61861 * 25.43344 * 24 15 14 43 43 H 1.09004 * 113.61085 * 156.25356 * 24 15 14 44 44 H 1.08000 * 127.02610 * 179.97438 * 25 11 10 45 45 H 1.08004 * 125.43647 * 180.02562 * 26 25 11 46 46 H 1.07996 * 120.02580 * 180.02562 * 28 7 6 47 47 H 1.07997 * 119.96591 * 180.02562 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 2.7215 -0.0358 -2.1426 6 6 3.1880 -0.6865 -3.2684 7 6 2.8531 -2.0146 -3.4893 8 8 3.3054 -2.6550 -4.5994 9 6 4.1220 -1.8999 -5.4965 10 6 4.5256 -2.7683 -6.6602 11 6 3.8358 -2.9076 -7.8289 12 6 2.5692 -2.2516 -8.1994 13 8 2.0284 -1.4898 -7.4208 14 7 2.0107 -2.4951 -9.4016 15 6 0.7518 -1.8426 -9.7702 16 1 0.1648 -1.5359 -8.9045 17 6 0.9170 -0.7382 -10.8275 18 6 0.7216 -1.8339 -11.8886 19 8 1.9376 -2.4682 -12.2899 20 6 -0.1374 -1.3917 -13.0751 21 9 -1.1697 -0.5641 -12.6207 22 9 0.6556 -0.6892 -13.9888 23 9 -0.6834 -2.5177 -13.7007 24 6 -0.0594 -2.6184 -10.8212 25 6 4.6199 -3.8492 -8.6413 26 6 5.6859 -4.1800 -7.8966 27 8 5.6230 -3.5284 -6.7249 28 6 2.0554 -2.6876 -2.5754 29 6 1.5969 -2.0343 -1.4478 30 1 -0.3933 0.4417 -0.7650 31 1 1.7922 -0.5138 0.8900 32 1 1.5880 2.4585 -1.2243 33 1 1.5615 2.4679 1.2085 34 1 2.9777 0.9995 -1.9728 35 1 3.8085 -0.1603 -3.9786 36 1 3.5606 -1.0402 -5.8626 37 1 5.0139 -1.5553 -4.9733 38 1 2.4422 -3.1025 -10.0228 39 1 0.1181 0.0031 -10.8130 40 1 1.9109 -0.2907 -10.8399 41 1 2.4333 -1.9794 -12.9610 42 1 0.1461 -3.6888 -10.8286 43 1 -1.1256 -2.3922 -10.8041 44 1 4.3853 -4.2031 -9.6344 45 1 6.4718 -4.8582 -8.1946 46 1 1.7937 -3.7216 -2.7449 47 1 0.9762 -2.5580 -0.7359 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047570_4549634.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:37:29 Heat of formation + Delta-G solvation = -217.412569 kcal Electronic energy + Delta-G solvation = -39543.371026 eV Core-core repulsion = 33632.663954 eV Total energy + Delta-G solvation = -5910.707071 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 414.121 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -51.25990 -48.80508 -48.73858 -43.72209 -41.56595 -41.29398 -39.83021 -39.24477 -37.31121 -36.47373 -34.60416 -33.64228 -32.81429 -31.97899 -31.39956 -28.98744 -27.83762 -27.20577 -26.20699 -25.18048 -23.88151 -23.70008 -22.47463 -22.25708 -21.19885 -20.84012 -20.05747 -19.55607 -19.50653 -19.43051 -19.11195 -18.36842 -17.52150 -17.26777 -17.21443 -17.07524 -16.94227 -16.69119 -16.34543 -16.14497 -16.10291 -15.92940 -15.70008 -15.59476 -15.47893 -15.28154 -15.18218 -14.95009 -14.91744 -14.78881 -14.68790 -14.60832 -14.39564 -14.19750 -13.99772 -13.79230 -13.76098 -13.56046 -13.50628 -13.11045 -12.95118 -12.65360 -12.31225 -12.12443 -12.10025 -11.94083 -11.64496 -11.26392 -11.20776 -10.97401 -10.59908 -10.25713 -10.05101 -9.83750 -9.24458 -4.91946 -0.05038 0.26615 0.29615 1.02610 1.33092 1.49097 1.50540 1.61184 1.93852 1.96419 2.06584 2.40909 2.45235 2.56066 2.63592 2.63978 2.83380 3.34435 3.37318 3.43325 3.43963 3.50886 3.61339 3.69452 3.71855 3.79278 3.91259 3.94677 4.11318 4.20916 4.29406 4.42221 4.43843 4.45635 4.46583 4.53501 4.55995 4.66052 4.68997 4.73623 4.76765 4.80897 4.95686 5.14442 5.25196 5.26150 5.38402 5.47127 5.68732 5.88395 6.23170 6.25995 6.42671 6.49229 7.06142 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.078 4.078 3 Si 0.766 3.234 4 C -0.158 4.158 5 C -0.076 4.076 6 C -0.205 4.205 7 C 0.125 3.875 8 O -0.322 6.322 9 C 0.134 3.866 10 C 0.043 3.957 11 C -0.225 4.225 12 C 0.588 3.412 13 O -0.568 6.568 14 N -0.687 5.687 15 C 0.129 3.871 16 H 0.108 0.892 17 C -0.163 4.163 18 C 0.072 3.928 19 O -0.516 6.516 20 C 0.432 3.568 21 F -0.178 7.178 22 F -0.186 7.186 23 F -0.184 7.184 24 C -0.121 4.121 25 C -0.197 4.197 26 C -0.011 4.011 27 O -0.176 6.176 28 C -0.163 4.163 29 C -0.058 4.058 30 H 0.385 0.615 31 H 0.126 0.874 32 H -0.284 1.284 33 H -0.303 1.303 34 H 0.150 0.850 35 H 0.149 0.851 36 H 0.108 0.892 37 H 0.103 0.897 38 H 0.418 0.582 39 H 0.122 0.878 40 H 0.095 0.905 41 H 0.406 0.594 42 H 0.106 0.894 43 H 0.133 0.867 44 H 0.188 0.812 45 H 0.252 0.748 46 H 0.133 0.867 47 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.747 -1.050 -3.600 6.862 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.186 4.186 3 Si 0.671 3.329 4 C -0.159 4.159 5 C -0.093 4.093 6 C -0.223 4.223 7 C 0.080 3.920 8 O -0.237 6.237 9 C 0.060 3.940 10 C -0.010 4.010 11 C -0.229 4.229 12 C 0.377 3.623 13 O -0.448 6.448 14 N -0.339 5.339 15 C 0.023 3.977 16 H 0.126 0.874 17 C -0.202 4.202 18 C 0.028 3.972 19 O -0.325 6.325 20 C 0.378 3.622 21 F -0.159 7.159 22 F -0.167 7.167 23 F -0.166 7.166 24 C -0.159 4.159 25 C -0.216 4.216 26 C -0.077 4.077 27 O -0.071 6.071 28 C -0.181 4.181 29 C -0.076 4.076 30 H 0.234 0.766 31 H 0.144 0.856 32 H -0.211 1.211 33 H -0.231 1.231 34 H 0.167 0.833 35 H 0.166 0.834 36 H 0.126 0.874 37 H 0.121 0.879 38 H 0.256 0.744 39 H 0.140 0.860 40 H 0.114 0.886 41 H 0.259 0.741 42 H 0.124 0.876 43 H 0.151 0.849 44 H 0.205 0.795 45 H 0.268 0.732 46 H 0.151 0.849 47 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 5.237 -0.665 -1.993 5.642 hybrid contribution -1.039 0.109 -1.968 2.228 sum 4.198 -0.556 -3.961 5.798 Atomic orbital electron populations 1.86558 1.18713 1.80353 1.50137 1.25175 0.83271 1.11681 0.98519 0.94155 0.90339 0.72082 0.76277 1.20279 1.01956 0.95323 0.98295 1.21016 0.95619 1.00014 0.92674 1.21413 1.06061 0.93713 1.01142 1.19174 0.94612 0.91882 0.86316 1.86048 1.65288 1.40654 1.31692 1.21161 0.95527 0.91191 0.86102 1.22054 0.86946 0.95922 0.96042 1.21332 0.98527 1.05907 0.97175 1.17409 0.83261 0.80180 0.81496 1.90778 1.64071 1.38316 1.51671 1.45357 1.24067 1.47753 1.16760 1.21610 0.85522 0.93197 0.97368 0.87378 1.24227 1.05894 0.97028 0.93065 1.23579 0.87010 0.98168 0.88446 1.86499 1.32063 1.50785 1.63199 1.21487 0.80241 0.75107 0.85384 1.93187 1.60960 1.73064 1.88706 1.93181 1.73691 1.79851 1.70024 1.93212 1.86949 1.51921 1.84474 1.23590 1.00511 1.02010 0.89801 1.23224 0.95476 1.00200 1.02674 1.24895 1.02057 0.98402 0.82305 1.83798 1.38571 1.46868 1.37905 1.20626 1.01199 1.01431 0.94881 1.20938 0.96979 0.93884 0.95776 0.76578 0.85647 1.21088 1.23144 0.83330 0.83384 0.87427 0.87909 0.74382 0.86033 0.88627 0.74119 0.87595 0.84860 0.79492 0.73232 0.84936 0.84308 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.20 12.77 -148.98 -1.90 -4.10 16 2 C -0.08 -0.05 2.82 71.23 0.20 0.15 16 3 Si 0.77 -0.78 29.79 68.60 2.04 1.26 16 4 C -0.16 -0.34 5.39 -19.85 -0.11 -0.45 16 5 C -0.08 -0.08 8.66 22.25 0.19 0.12 16 6 C -0.20 -0.58 9.04 22.37 0.20 -0.38 16 7 C 0.13 0.84 6.69 22.51 0.15 0.99 16 8 O -0.32 -2.70 10.12 -92.44 -0.94 -3.64 16 9 C 0.13 0.51 4.74 71.24 0.34 0.85 16 10 C 0.04 0.18 7.00 25.26 0.18 0.36 16 11 C -0.22 -0.68 6.31 -18.99 -0.12 -0.80 16 12 C 0.59 2.93 7.81 86.65 0.68 3.61 16 13 O -0.57 -6.43 14.44 -4.06 -0.06 -6.49 16 14 N -0.69 0.84 5.15 -443.34 -2.28 -1.44 16 15 C 0.13 -0.32 4.32 45.51 0.20 -0.12 16 16 H 0.11 0.05 7.46 -2.39 -0.02 0.03 16 17 C -0.16 0.77 7.15 31.12 0.22 0.99 16 18 C 0.07 -0.37 1.36 -10.27 -0.01 -0.38 16 19 O -0.52 3.59 12.15 -148.98 -1.81 1.78 16 20 C 0.43 -0.65 2.85 71.98 0.21 -0.45 16 21 F -0.18 0.02 15.76 44.97 0.71 0.73 16 22 F -0.19 0.09 16.65 44.97 0.75 0.84 16 23 F -0.18 -0.30 17.18 44.97 0.77 0.47 16 24 C -0.12 0.67 7.01 31.12 0.22 0.89 16 25 C -0.20 0.73 10.60 23.65 0.25 0.98 16 26 C -0.01 0.05 12.03 66.89 0.80 0.86 16 27 O -0.18 -0.32 10.52 4.49 0.05 -0.27 16 28 C -0.16 -0.97 9.99 22.37 0.22 -0.75 16 29 C -0.06 -0.22 9.60 22.25 0.21 -0.01 16 30 H 0.39 -0.42 8.70 -74.06 -0.64 -1.06 16 31 H 0.13 -0.15 7.96 -2.39 -0.02 -0.17 16 32 H -0.28 -0.84 7.11 99.48 0.71 -0.13 16 33 H -0.30 -2.01 7.11 99.48 0.71 -1.31 16 34 H 0.15 -0.55 4.87 -2.91 -0.01 -0.56 16 35 H 0.15 -0.20 6.30 -2.91 -0.02 -0.22 16 36 H 0.11 0.51 6.00 -2.38 -0.01 0.50 16 37 H 0.10 -0.12 7.66 -2.39 -0.02 -0.14 16 38 H 0.42 -2.01 6.77 -92.71 -0.63 -2.63 16 39 H 0.12 -0.68 7.13 -2.39 -0.02 -0.69 16 40 H 0.10 -0.42 8.14 -2.38 -0.02 -0.44 16 41 H 0.41 -4.89 8.42 -74.06 -0.62 -5.52 16 42 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 43 H 0.13 -1.01 7.89 -2.38 -0.02 -1.03 16 44 H 0.19 -1.83 7.74 -2.91 -0.02 -1.85 16 45 H 0.25 -3.43 8.06 -2.91 -0.02 -3.45 16 46 H 0.13 0.64 8.06 -2.91 -0.02 0.62 16 47 H 0.14 0.28 8.06 -2.91 -0.02 0.26 16 Total: 0.00 -23.49 409.47 0.61 -22.88 By element: Atomic # 1 Polarization: -17.70 SS G_CDS: -0.75 Total: -18.45 kcal Atomic # 6 Polarization: 2.41 SS G_CDS: 4.03 Total: 6.44 kcal Atomic # 7 Polarization: 0.84 SS G_CDS: -2.28 Total: -1.44 kcal Atomic # 8 Polarization: -8.07 SS G_CDS: -4.66 Total: -12.73 kcal Atomic # 9 Polarization: -0.19 SS G_CDS: 2.23 Total: 2.04 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: 2.04 Total: 1.26 kcal Total: -23.49 0.61 -22.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047570_4549634.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -194.535 kcal (2) G-P(sol) polarization free energy of solvation -23.491 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -218.026 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -217.413 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.39 seconds