Wall clock time and date at job start Tue Mar 9 2021 13:39:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35658 * 116.99724 * 2 1 4 4 C 1.40141 * 120.14733 * 180.02562 * 3 2 1 5 5 C 1.47532 * 120.19405 * 359.97438 * 4 3 2 6 6 O 1.21592 * 119.99947 * 359.72019 * 5 4 3 7 7 N 1.34775 * 120.00013 * 179.72828 * 5 4 3 8 8 C 1.46506 * 119.99832 * 179.97438 * 7 5 4 9 9 H 1.09004 * 112.84527 * 23.80128 * 8 7 5 10 10 C 1.53778 * 113.61145 * 154.99410 * 8 7 5 11 11 C 1.53787 * 87.08035 * 140.06537 * 10 8 7 12 12 O 1.42895 * 113.61204 * 89.11388 * 11 10 8 13 13 C 1.52992 * 113.61596 * 220.01776 * 11 10 8 14 14 F 1.39906 * 109.47022 * 60.00193 * 13 11 10 15 15 F 1.39904 * 109.47275 * 179.97438 * 13 11 10 16 16 F 1.39902 * 109.47492 * 300.00069 * 13 11 10 17 17 C 1.53778 * 113.68980 * 252.53155 * 8 7 5 18 18 C 1.39709 * 119.61393 * 179.72152 * 4 3 2 19 19 C 1.37790 * 119.90796 * 0.25624 * 18 4 3 20 20 C 1.50705 * 119.84904 * 179.97438 * 19 18 4 21 21 O 1.42899 * 109.46819 * 64.99397 * 20 19 18 22 22 Si 1.86298 * 109.47140 * 184.99612 * 20 19 18 23 23 C 1.38538 * 120.30201 * 0.02562 * 19 18 4 24 24 C 1.38059 * 120.39358 * 359.97438 * 23 19 18 25 25 H 1.09006 * 109.47093 * 60.00076 * 1 2 3 26 26 H 1.08997 * 109.46927 * 180.02562 * 1 2 3 27 27 H 1.08996 * 109.47486 * 300.00136 * 1 2 3 28 28 H 0.97000 * 120.00109 * 359.97438 * 7 5 4 29 29 H 1.08998 * 113.61879 * 25.52019 * 10 8 7 30 30 H 1.08997 * 113.69304 * 254.62106 * 10 8 7 31 31 H 0.96703 * 114.00032 * 180.02562 * 12 11 10 32 32 H 1.08993 * 113.61229 * 105.46247 * 17 8 7 33 33 H 1.09000 * 113.61263 * 334.55897 * 17 8 7 34 34 H 1.08001 * 120.04591 * 180.22020 * 18 4 3 35 35 H 1.09005 * 109.46867 * 305.00074 * 20 19 18 36 36 H 0.96708 * 113.99715 * 179.97438 * 21 20 19 37 37 H 1.48499 * 109.99683 * 178.68086 * 22 20 19 38 38 H 1.48499 * 109.99935 * 300.00046 * 22 20 19 39 39 H 1.08002 * 119.80609 * 179.97438 * 23 19 18 40 40 H 1.07997 * 119.95975 * 180.02562 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 3.4441 1.2858 -0.0005 5 6 4.2550 0.0533 -0.0005 6 8 3.7095 -1.0334 0.0051 7 7 5.6005 0.1319 -0.0066 8 6 6.4057 -1.0920 -0.0060 9 1 5.8688 -1.9521 -0.4063 10 6 7.8085 -0.9067 -0.6083 11 6 8.3259 -1.8199 0.5157 12 8 8.3102 -3.2082 0.1780 13 6 9.6614 -1.3661 1.1081 14 9 9.5211 -0.0818 1.6450 15 9 10.0492 -2.2533 2.1180 16 9 10.6351 -1.3478 0.1037 17 6 7.1043 -1.3714 1.3352 18 6 4.0667 2.5364 -0.0064 19 6 3.3036 3.6838 -0.0063 20 6 3.9766 5.0322 -0.0121 21 8 4.6942 5.2011 -1.2362 22 14 2.6889 6.3696 0.1425 23 6 1.9206 3.6034 0.0001 24 6 1.2924 2.3740 0.0060 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 0.0005 27 1 -0.3634 0.5138 0.8899 28 1 6.0357 0.9988 -0.0113 29 1 8.1792 0.1164 -0.5451 30 1 7.9176 -1.3356 -1.6044 31 1 8.6341 -3.7877 0.8811 32 1 6.6435 -2.1761 1.9080 33 1 7.2823 -0.4753 1.9297 34 1 5.1446 2.6039 -0.0105 35 1 4.6694 5.0960 0.8270 36 1 5.1530 6.0492 -1.3094 37 1 3.3422 7.7028 0.1700 38 1 1.7381 6.2932 -0.9957 39 1 1.3303 4.5078 0.0006 40 1 0.2138 2.3196 0.0106 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17047590_12496546.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:39:28 Heat of formation + Delta-G solvation = -231.933778 kcal Electronic energy + Delta-G solvation = -31293.236713 eV Core-core repulsion = 26240.798187 eV Total energy + Delta-G solvation = -5052.438526 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.106 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -51.23659 -48.78565 -48.68873 -41.84973 -41.10506 -39.50525 -39.14201 -37.36903 -36.59434 -34.25595 -32.51047 -31.94581 -28.92884 -28.50314 -27.28563 -26.19216 -25.56168 -23.90153 -22.44289 -21.62348 -21.19572 -20.02689 -19.54802 -19.46314 -19.34171 -18.66115 -18.15716 -17.73097 -17.22223 -16.82407 -16.72871 -16.29200 -16.19401 -15.85618 -15.74669 -15.69652 -15.53836 -15.34911 -15.14871 -14.90168 -14.87846 -14.82735 -14.64444 -14.38089 -14.10933 -13.98419 -13.88596 -13.79020 -13.57201 -13.25212 -13.05188 -12.58015 -12.50483 -12.41241 -12.05080 -11.98141 -11.77551 -11.41807 -10.83119 -10.54625 -10.24155 -10.07456 -9.27850 -5.06881 -0.25200 0.19773 1.17079 1.41589 1.49345 1.81110 1.86143 2.09528 2.22008 2.28716 2.53161 2.59037 2.67636 2.80920 3.21343 3.31338 3.43049 3.44952 3.52921 3.57278 3.72829 3.95741 4.04397 4.08648 4.17287 4.21045 4.22099 4.25642 4.35513 4.43059 4.54366 4.58144 4.64483 4.68007 4.84366 4.90732 5.07142 5.26514 5.39542 5.49068 6.05520 6.27239 6.33294 6.48311 7.28271 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.279 6.279 3 C 0.194 3.806 4 C -0.177 4.177 5 C 0.566 3.434 6 O -0.511 6.511 7 N -0.722 5.722 8 C 0.144 3.856 9 H 0.131 0.869 10 C -0.127 4.127 11 C 0.065 3.935 12 O -0.508 6.508 13 C 0.436 3.564 14 F -0.175 7.175 15 F -0.181 7.181 16 F -0.174 7.174 17 C -0.171 4.171 18 C -0.018 4.018 19 C -0.121 4.121 20 C -0.070 4.070 21 O -0.537 6.537 22 Si 0.680 3.320 23 C -0.044 4.044 24 C -0.213 4.213 25 H 0.058 0.942 26 H 0.105 0.895 27 H 0.059 0.941 28 H 0.401 0.599 29 H 0.111 0.889 30 H 0.105 0.895 31 H 0.393 0.607 32 H 0.098 0.902 33 H 0.108 0.892 34 H 0.134 0.866 35 H 0.078 0.922 36 H 0.381 0.619 37 H -0.260 1.260 38 H -0.254 1.254 39 H 0.135 0.865 40 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.084 4.137 2.794 5.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.190 6.190 3 C 0.145 3.855 4 C -0.180 4.180 5 C 0.354 3.646 6 O -0.386 6.386 7 N -0.375 5.375 8 C 0.039 3.961 9 H 0.149 0.851 10 C -0.165 4.165 11 C 0.021 3.979 12 O -0.315 6.315 13 C 0.382 3.618 14 F -0.156 7.156 15 F -0.162 7.162 16 F -0.155 7.155 17 C -0.210 4.210 18 C -0.037 4.037 19 C -0.122 4.122 20 C -0.180 4.180 21 O -0.344 6.344 22 Si 0.581 3.419 23 C -0.062 4.062 24 C -0.232 4.232 25 H 0.077 0.923 26 H 0.123 0.877 27 H 0.078 0.922 28 H 0.237 0.763 29 H 0.129 0.871 30 H 0.123 0.877 31 H 0.244 0.756 32 H 0.116 0.884 33 H 0.127 0.873 34 H 0.152 0.848 35 H 0.096 0.904 36 H 0.229 0.771 37 H -0.185 1.185 38 H -0.179 1.179 39 H 0.152 0.848 40 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -3.234 3.463 1.773 5.059 hybrid contribution 1.614 0.816 0.015 1.809 sum -1.620 4.279 1.788 4.913 Atomic orbital electron populations 1.23242 0.78141 1.04773 1.01497 1.86376 1.21250 1.25167 1.86175 1.19076 0.90898 0.85075 0.90433 1.19258 0.90887 0.93699 1.14202 1.17969 0.81722 0.88754 0.76197 1.90856 1.71417 1.28565 1.47792 1.45812 1.06013 1.09075 1.76574 1.22195 0.89571 0.89464 0.94913 0.85104 1.23546 0.94856 0.99066 0.99039 1.23214 0.88753 0.85936 1.00009 1.86644 1.87446 1.12700 1.44708 1.21147 0.88400 0.75688 0.76604 1.93187 1.95810 1.39885 1.86713 1.93195 1.92523 1.68427 1.62095 1.93234 1.65815 1.96160 1.60292 1.24282 0.94019 1.03971 0.98727 1.20939 0.99766 0.89893 0.93105 1.19004 0.93042 0.93697 1.06425 1.24702 1.02616 1.01603 0.89080 1.86594 1.68483 1.41400 1.37924 0.95099 0.80848 0.76589 0.89321 1.20986 0.93606 0.97536 0.94074 1.21212 1.00775 0.91431 1.09775 0.92322 0.87652 0.92205 0.76347 0.87105 0.87694 0.75601 0.88383 0.87324 0.84827 0.90442 0.77128 1.18479 1.17906 0.84809 0.84018 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.95 8.57 -40.55 -0.35 -1.30 16 3 C 0.19 0.46 6.70 -38.69 -0.26 0.20 16 4 C -0.18 -0.38 5.89 -104.85 -0.62 -0.99 16 5 C 0.57 1.81 7.76 -12.47 -0.10 1.72 16 6 O -0.51 -3.55 14.76 -16.59 -0.24 -3.79 16 7 N -0.72 0.12 5.31 -54.06 -0.29 -0.17 16 8 C 0.14 -0.04 4.17 -67.12 -0.28 -0.32 16 9 H 0.13 0.23 7.46 -51.93 -0.39 -0.16 16 10 C -0.13 0.20 7.01 -25.92 -0.18 0.02 16 11 C 0.07 -0.06 1.36 -89.81 -0.12 -0.18 16 12 O -0.51 0.29 13.41 -35.23 -0.47 -0.19 16 13 C 0.44 0.05 2.85 37.15 0.11 0.16 16 14 F -0.17 -0.03 15.75 2.25 0.04 0.00 16 15 F -0.18 -0.11 16.65 2.25 0.04 -0.07 16 16 F -0.17 -0.28 17.18 2.25 0.04 -0.24 16 17 C -0.17 0.22 7.15 -25.92 -0.19 0.03 16 18 C -0.02 0.00 9.16 -39.20 -0.36 -0.36 16 19 C -0.12 0.02 5.38 -104.67 -0.56 -0.54 16 20 C -0.07 0.12 2.78 36.01 0.10 0.22 16 21 O -0.54 0.23 12.81 -35.23 -0.45 -0.22 16 22 Si 0.68 -1.45 29.83 -169.99 -5.07 -6.52 16 23 C -0.04 0.03 8.65 -39.54 -0.34 -0.32 16 24 C -0.21 0.01 9.03 -39.47 -0.36 -0.35 16 25 H 0.06 -0.13 7.67 -51.93 -0.40 -0.53 16 26 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 27 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 28 H 0.40 -1.08 6.76 -40.82 -0.28 -1.36 16 29 H 0.11 -0.35 7.86 -51.93 -0.41 -0.75 16 30 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 31 H 0.39 -1.44 8.43 45.56 0.38 -1.06 16 32 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.11 -0.21 7.13 -51.93 -0.37 -0.58 16 34 H 0.13 -0.31 6.40 -52.49 -0.34 -0.64 16 35 H 0.08 -0.27 7.96 -51.93 -0.41 -0.69 16 36 H 0.38 -1.59 8.74 45.56 0.40 -1.19 16 37 H -0.26 -0.02 7.11 56.52 0.40 0.39 16 38 H -0.25 -0.24 7.04 56.52 0.40 0.16 16 39 H 0.13 -0.34 4.84 -52.49 -0.25 -0.59 16 40 H 0.14 -0.34 6.30 -52.49 -0.33 -0.67 16 LS Contribution 347.77 15.07 5.24 5.24 Total: 0.00 -10.00 347.77 -6.95 -16.94 By element: Atomic # 1 Polarization: -6.68 SS G_CDS: -3.26 Total: -9.94 kcal Atomic # 6 Polarization: 2.42 SS G_CDS: -2.17 Total: 0.25 kcal Atomic # 7 Polarization: 0.12 SS G_CDS: -0.29 Total: -0.17 kcal Atomic # 8 Polarization: -3.98 SS G_CDS: -1.52 Total: -5.50 kcal Atomic # 9 Polarization: -0.43 SS G_CDS: 0.11 Total: -0.31 kcal Atomic # 14 Polarization: -1.45 SS G_CDS: -5.07 Total: -6.52 kcal Total LS contribution 5.24 Total: 5.24 kcal Total: -10.00 -6.95 -16.94 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_12496546.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -214.990 kcal (2) G-P(sol) polarization free energy of solvation -9.999 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -224.988 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.945 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.944 kcal (6) G-S(sol) free energy of system = (1) + (5) -231.934 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds