Wall clock time and date at job start Tue Mar 9 2021 13:42:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86297 * 109.46831 * 2 1 4 4 C 1.50699 * 109.47420 * 240.00024 * 2 1 3 5 5 C 1.32774 * 124.71079 * 299.99860 * 4 2 1 6 6 C 1.44421 * 113.08547 * 180.02562 * 5 4 2 7 7 C 1.47183 * 123.46447 * 180.02562 * 6 5 4 8 8 O 1.21639 * 119.99798 * 359.97438 * 7 6 5 9 9 N 1.34780 * 120.00383 * 179.97438 * 7 6 5 10 10 C 1.46502 * 120.00129 * 179.97438 * 9 7 6 11 11 H 1.09001 * 112.84860 * 336.19594 * 10 9 7 12 12 C 1.53775 * 113.61309 * 107.50291 * 10 9 7 13 13 C 1.53782 * 87.07947 * 139.98007 * 12 10 9 14 14 O 1.42902 * 113.61427 * 89.12065 * 13 12 10 15 15 C 1.52998 * 113.69304 * 220.00754 * 13 12 10 16 16 F 1.39898 * 109.47655 * 157.53784 * 15 13 12 17 17 F 1.39907 * 109.47550 * 277.53912 * 15 13 12 18 18 F 1.39904 * 109.47076 * 37.53752 * 15 13 12 19 19 C 1.53780 * 113.61125 * 205.00454 * 10 9 7 20 20 C 1.36013 * 113.07665 * 359.97438 * 6 5 4 21 21 S 1.70444 * 110.81665 * 0.02562 * 20 6 5 22 22 H 0.96705 * 113.99531 * 60.00757 * 1 2 3 23 23 H 1.08996 * 109.46898 * 119.99833 * 2 1 3 24 24 H 1.48496 * 110.00316 * 59.99666 * 3 2 1 25 25 H 1.48507 * 109.99949 * 181.31857 * 3 2 1 26 26 H 1.07997 * 123.45706 * 359.73314 * 5 4 2 27 27 H 0.96998 * 119.99387 * 0.02562 * 9 7 6 28 28 H 1.08992 * 113.61822 * 254.52817 * 12 10 9 29 29 H 1.09007 * 113.61295 * 25.43771 * 12 10 9 30 30 H 0.96696 * 114.00413 * 82.49995 * 14 13 12 31 31 H 1.08997 * 113.61346 * 334.56423 * 19 10 9 32 32 H 1.08995 * 113.61470 * 105.47536 * 19 10 9 33 33 H 1.08003 * 124.59171 * 179.97438 * 20 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9314 -0.7104 -1.2304 5 6 1.6690 -1.9764 -1.5327 6 6 2.2783 -2.4008 -2.7714 7 6 2.1356 -3.7580 -3.3227 8 8 1.4768 -4.5899 -2.7281 9 7 2.7349 -4.0791 -4.4865 10 6 2.5933 -5.4302 -5.0349 11 1 2.3603 -6.1741 -4.2730 12 6 1.6778 -5.5015 -6.2684 13 6 2.6852 -6.5012 -6.8607 14 8 2.4113 -7.8611 -6.5174 15 6 2.9383 -6.3055 -8.3568 16 9 4.1758 -6.8621 -8.6973 17 9 1.9261 -6.9371 -9.0876 18 9 2.9442 -4.9384 -8.6539 19 6 3.7470 -5.8415 -5.9649 20 6 2.9966 -1.4172 -3.3767 21 16 2.9449 0.0206 -2.4627 22 1 -0.3933 0.4416 -0.7652 23 1 1.7923 -0.5138 0.8900 24 1 1.5614 2.4679 1.2084 25 1 3.5346 1.7703 -0.0321 26 1 1.0660 -2.6237 -0.9133 27 1 3.2605 -3.4159 -4.9604 28 1 0.7003 -5.9372 -6.0621 29 1 1.6165 -4.5641 -6.8214 30 1 1.7443 -8.2814 -7.0773 31 1 4.2512 -4.9971 -6.4348 32 1 4.4397 -6.5517 -5.5134 33 1 3.5284 -1.5319 -4.3097 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17047590_6894386.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:42:06 Heat of formation + Delta-G solvation = -202.103282 kcal Electronic energy + Delta-G solvation = -25033.621459 eV Core-core repulsion = 20545.848538 eV Total energy + Delta-G solvation = -4487.772921 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.048 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -51.26801 -48.80817 -48.74439 -41.59656 -40.27235 -38.76414 -37.11523 -36.64762 -34.28155 -31.69522 -28.87573 -27.20780 -26.96544 -26.01816 -23.75358 -22.09057 -21.50468 -20.48194 -20.05717 -19.55590 -19.45226 -18.86384 -18.16985 -17.66426 -17.22510 -16.77800 -16.38554 -16.27284 -15.93131 -15.63818 -15.58475 -15.43688 -15.18671 -15.14155 -14.92378 -14.89921 -14.57397 -14.47378 -14.11972 -13.99937 -13.78263 -13.61566 -13.56981 -13.27308 -12.64570 -12.52615 -12.28987 -11.96392 -11.92846 -11.39715 -11.06208 -10.60345 -10.30402 -9.97678 -9.44441 -5.11988 -0.33710 0.39527 0.70218 0.81294 1.23442 1.41467 1.60662 1.91631 2.05027 2.20006 2.39523 2.55243 2.63436 2.83001 3.33214 3.40404 3.44334 3.47339 3.66743 3.87304 3.96822 4.10537 4.28372 4.38145 4.40249 4.42333 4.62683 4.71540 4.76105 4.84304 5.01958 5.16553 5.32716 6.25743 6.40105 6.69316 7.09263 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.038 4.038 3 Si 0.740 3.260 4 C -0.250 4.250 5 C -0.076 4.076 6 C -0.184 4.184 7 C 0.579 3.421 8 O -0.581 6.581 9 N -0.699 5.699 10 C 0.137 3.863 11 H 0.106 0.894 12 C -0.164 4.164 13 C 0.068 3.932 14 O -0.522 6.522 15 C 0.438 3.562 16 F -0.183 7.183 17 F -0.185 7.185 18 F -0.173 7.173 19 C -0.119 4.119 20 C -0.188 4.188 21 S 0.252 5.748 22 H 0.397 0.603 23 H 0.113 0.887 24 H -0.275 1.275 25 H -0.253 1.253 26 H 0.131 0.869 27 H 0.418 0.582 28 H 0.093 0.907 29 H 0.122 0.878 30 H 0.405 0.595 31 H 0.134 0.866 32 H 0.103 0.897 33 H 0.207 0.793 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.396 6.104 -4.421 7.909 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.150 4.150 3 Si 0.641 3.359 4 C -0.367 4.367 5 C -0.105 4.105 6 C -0.202 4.202 7 C 0.366 3.634 8 O -0.462 6.462 9 N -0.351 5.351 10 C 0.031 3.969 11 H 0.124 0.876 12 C -0.203 4.203 13 C 0.024 3.976 14 O -0.331 6.331 15 C 0.383 3.617 16 F -0.164 7.164 17 F -0.167 7.167 18 F -0.154 7.154 19 C -0.157 4.157 20 C -0.326 4.326 21 S 0.519 5.481 22 H 0.247 0.753 23 H 0.130 0.870 24 H -0.201 1.201 25 H -0.179 1.179 26 H 0.149 0.851 27 H 0.257 0.743 28 H 0.112 0.888 29 H 0.140 0.860 30 H 0.258 0.742 31 H 0.152 0.848 32 H 0.122 0.878 33 H 0.224 0.776 Dipole moment (debyes) X Y Z Total from point charges 3.574 7.348 -2.817 8.643 hybrid contribution -0.943 -2.390 -0.507 2.619 sum 2.631 4.958 -3.325 6.524 Atomic orbital electron populations 1.86505 1.17006 1.82219 1.50371 1.24694 0.85185 1.10301 0.94821 0.94168 0.79472 0.74361 0.87860 1.24895 1.08774 0.98873 1.04118 1.20971 0.99108 0.94976 0.95443 1.20052 1.06840 0.94689 0.98638 1.17933 0.78164 0.86822 0.80436 1.90809 1.42327 1.51850 1.61201 1.45586 1.52936 1.13732 1.22859 1.22134 0.95917 0.84762 0.94042 0.87591 1.24261 0.99223 0.99930 0.96895 1.23201 1.02170 0.86188 0.86046 1.86622 1.64674 1.21836 1.60010 1.21266 0.74125 0.74185 0.92130 1.93216 1.43952 1.85375 1.93866 1.93189 1.60651 1.82316 1.80529 1.93185 1.96165 1.31601 1.94474 1.23594 0.96123 1.01252 0.94718 1.26210 1.02397 0.98155 1.05836 1.82958 1.44617 1.10055 1.10485 0.75293 0.86976 1.20069 1.17851 0.85150 0.74333 0.88804 0.86002 0.74241 0.84768 0.87827 0.77565 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -0.26 12.85 -148.98 -1.91 -2.17 16 2 C -0.04 0.04 2.95 71.24 0.21 0.25 16 3 Si 0.74 -3.15 30.91 68.60 2.12 -1.03 16 4 C -0.25 0.24 5.68 24.51 0.14 0.38 16 5 C -0.08 -0.29 9.91 22.67 0.22 -0.06 16 6 C -0.18 -0.20 5.98 -19.87 -0.12 -0.32 16 7 C 0.58 2.69 7.79 86.59 0.67 3.37 16 8 O -0.58 -8.44 16.40 -4.15 -0.07 -8.51 16 9 N -0.70 2.35 5.32 -443.52 -2.36 -0.01 16 10 C 0.14 -0.29 4.17 45.51 0.19 -0.10 16 11 H 0.11 0.40 7.46 -2.39 -0.02 0.38 16 12 C -0.16 0.68 7.15 31.12 0.22 0.91 16 13 C 0.07 -0.24 1.36 -10.27 -0.01 -0.25 16 14 O -0.52 0.93 13.41 -148.98 -2.00 -1.07 16 15 C 0.44 -0.66 2.85 71.98 0.21 -0.46 16 16 F -0.18 -0.30 17.18 44.97 0.77 0.48 16 17 F -0.19 -0.01 16.65 44.97 0.75 0.74 16 18 F -0.17 0.38 15.76 44.97 0.71 1.08 16 19 C -0.12 0.67 7.01 31.12 0.22 0.89 16 20 C -0.19 1.23 10.38 67.30 0.70 1.93 16 21 S 0.25 -1.69 20.18 -56.49 -1.14 -2.83 16 22 H 0.40 -3.18 8.70 -74.05 -0.64 -3.83 16 23 H 0.11 0.05 7.96 -2.39 -0.02 0.03 16 24 H -0.28 -0.77 7.11 99.48 0.71 -0.07 16 25 H -0.25 0.36 7.11 99.48 0.71 1.07 16 26 H 0.13 1.08 8.06 -2.91 -0.02 1.05 16 27 H 0.42 -4.50 7.22 -92.71 -0.67 -5.17 16 28 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 29 H 0.12 -0.82 7.14 -2.38 -0.02 -0.84 16 30 H 0.40 -3.14 8.42 -74.06 -0.62 -3.77 16 31 H 0.13 -1.41 7.86 -2.39 -0.02 -1.43 16 32 H 0.10 -0.49 8.14 -2.39 -0.02 -0.51 16 33 H 0.21 -3.01 7.01 -2.91 -0.02 -3.03 16 Total: 0.00 -22.02 314.23 -1.16 -23.18 By element: Atomic # 1 Polarization: -15.70 SS G_CDS: -0.68 Total: -16.38 kcal Atomic # 6 Polarization: 3.88 SS G_CDS: 2.65 Total: 6.53 kcal Atomic # 7 Polarization: 2.35 SS G_CDS: -2.36 Total: -0.01 kcal Atomic # 8 Polarization: -7.77 SS G_CDS: -3.98 Total: -11.75 kcal Atomic # 9 Polarization: 0.07 SS G_CDS: 2.23 Total: 2.30 kcal Atomic # 14 Polarization: -3.15 SS G_CDS: 2.12 Total: -1.03 kcal Atomic # 16 Polarization: -1.69 SS G_CDS: -1.14 Total: -2.83 kcal Total: -22.02 -1.16 -23.18 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17047590_6894386.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -178.927 kcal (2) G-P(sol) polarization free energy of solvation -22.017 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -200.943 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.160 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.177 kcal (6) G-S(sol) free energy of system = (1) + (5) -202.103 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds