Wall clock time and date at job start Tue Mar 9 2021 13:44:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42908 * 1 3 3 Si 1.86291 * 109.47132 * 2 1 4 4 C 1.50703 * 109.46819 * 120.00066 * 2 1 3 5 5 C 1.35084 * 126.06914 * 255.02389 * 4 2 1 6 6 N 1.35049 * 107.97582 * 179.97438 * 5 4 2 7 7 C 1.46496 * 125.93018 * 180.02562 * 6 5 4 8 8 C 1.50708 * 109.46723 * 125.00080 * 7 6 5 9 9 O 1.21271 * 120.00113 * 0.02562 * 8 7 6 10 10 N 1.34781 * 119.99625 * 179.97438 * 8 7 6 11 11 C 1.47219 * 136.18119 * 359.63585 * 10 8 7 12 12 C 1.53925 * 88.09102 * 153.63281 * 11 10 8 13 13 C 1.46278 * 136.17898 * 180.02562 * 10 8 7 14 14 C 1.53068 * 120.98443 * 80.59281 * 13 10 8 15 15 C 1.53918 * 86.84574 * 259.66998 * 14 13 10 16 16 C 1.53007 * 113.66228 * 220.52934 * 15 14 13 17 17 F 1.39896 * 109.46789 * 277.70223 * 16 15 14 18 18 C 1.53074 * 120.98325 * 332.55777 * 13 10 8 19 19 N 1.40068 * 108.13447 * 359.78606 * 6 5 4 20 20 C 1.31625 * 108.11205 * 0.36017 * 19 6 5 21 21 C 1.48422 * 126.03665 * 179.91101 * 20 19 6 22 22 C 1.39325 * 120.11509 * 324.68839 * 21 20 19 23 23 C 1.38023 * 119.87376 * 179.97438 * 22 21 20 24 24 C 1.38325 * 120.12194 * 359.97438 * 23 22 21 25 25 C 1.38323 * 120.23744 * 0.02562 * 24 23 22 26 26 C 1.38017 * 120.12365 * 359.97438 * 25 24 23 27 27 H 0.96705 * 113.99834 * 60.00347 * 1 2 3 28 28 H 1.08994 * 109.46696 * 239.99845 * 2 1 3 29 29 H 1.48500 * 110.00128 * 59.99699 * 3 2 1 30 30 H 1.48498 * 110.00308 * 181.31851 * 3 2 1 31 31 H 1.08002 * 126.01610 * 359.97438 * 5 4 2 32 32 H 1.09001 * 109.47202 * 245.00082 * 7 6 5 33 33 H 1.09003 * 109.47408 * 5.00607 * 7 6 5 34 34 H 1.09003 * 113.43146 * 268.41681 * 11 10 8 35 35 H 1.09002 * 113.43252 * 38.74092 * 11 10 8 36 36 H 1.09002 * 114.49363 * 272.05838 * 12 11 10 37 37 H 1.08997 * 114.16813 * 139.09606 * 12 11 10 38 38 H 1.09003 * 113.65502 * 14.15447 * 14 13 10 39 39 H 1.08999 * 113.65538 * 145.18732 * 14 13 10 40 40 H 1.08996 * 113.59458 * 89.71731 * 15 14 13 41 41 H 1.08997 * 109.46715 * 37.69849 * 16 15 14 42 42 H 1.08995 * 109.47314 * 157.70255 * 16 15 14 43 43 H 1.09008 * 113.65428 * 214.81950 * 18 13 10 44 44 H 1.09003 * 113.65252 * 345.75344 * 18 13 10 45 45 H 1.08000 * 120.06679 * 359.95277 * 22 21 20 46 46 H 1.08006 * 119.94167 * 179.97438 * 23 22 21 47 47 H 1.07994 * 119.87991 * 179.74775 * 24 23 22 48 48 H 1.08001 * 119.93400 * 179.97438 * 25 24 23 49 49 H 1.07994 * 120.06242 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4624 -0.1249 2.3259 6 7 2.7876 -1.0990 3.2029 7 6 3.3917 -0.9008 4.5227 8 6 2.5372 -1.5655 5.5712 9 8 1.5238 -2.1478 5.2477 10 7 2.8999 -1.5137 6.8683 11 6 4.0148 -0.9365 7.6372 12 6 3.0715 -0.8627 8.8513 13 6 2.3638 -2.0118 8.1348 14 6 2.5846 -3.4633 8.5675 15 6 1.1524 -3.7386 8.0755 16 6 0.3577 -4.6727 8.9904 17 9 0.6860 -6.0010 8.6990 18 6 0.8621 -2.2464 8.3169 19 7 2.4418 -2.3312 2.6339 20 6 1.9298 -2.1027 1.4430 21 6 1.4329 -3.1303 0.4943 22 6 2.0675 -4.3677 0.4085 23 6 1.6008 -5.3198 -0.4750 24 6 0.5050 -5.0476 -1.2740 25 6 -0.1288 -3.8208 -1.1927 26 6 0.3295 -2.8614 -0.3127 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5138 -0.8899 29 1 1.5615 2.4678 1.2084 30 1 3.5346 1.7703 -0.0321 31 1 2.6025 0.9357 2.4742 32 1 4.3894 -1.3396 4.5353 33 1 3.4614 0.1663 4.7339 34 1 4.8477 -1.6257 7.7767 35 1 4.3327 0.0405 7.2730 36 1 2.4865 0.0549 8.9139 37 1 3.5373 -1.1430 9.7960 38 1 3.3520 -3.9797 7.9907 39 1 2.7082 -3.5849 9.6437 40 1 1.0999 -4.0289 7.0262 41 1 0.6028 -4.4576 10.0304 42 1 -0.7091 -4.5183 8.8290 43 1 0.5042 -2.0277 9.3231 44 1 0.2504 -1.7872 7.5404 45 1 2.9232 -4.5813 1.0319 46 1 2.0922 -6.2793 -0.5427 47 1 0.1456 -5.7940 -1.9668 48 1 -0.9838 -3.6134 -1.8191 49 1 -0.1663 -1.9041 -0.2498 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_12622748.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:44:47 Heat of formation + Delta-G solvation = 70.653528 kcal Electronic energy + Delta-G solvation = -33991.792130 eV Core-core repulsion = 29418.377868 eV Total energy + Delta-G solvation = -4573.414261 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.164 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -48.68926 -42.72619 -42.23974 -39.98136 -39.49235 -37.72526 -37.13994 -34.95022 -32.59963 -32.09455 -31.69295 -31.00929 -29.12213 -28.60807 -27.04115 -25.99163 -24.56317 -24.42298 -23.54536 -22.76942 -21.74607 -21.51245 -20.96864 -19.24077 -18.53517 -18.36639 -18.11855 -17.67292 -17.28911 -17.21342 -16.86421 -16.77122 -16.41105 -16.29462 -16.05332 -15.95752 -15.62815 -15.24450 -15.12918 -14.99851 -14.68075 -14.42214 -14.38951 -14.23106 -13.89762 -13.78269 -13.72015 -13.58010 -13.44493 -13.39278 -12.85729 -12.77934 -12.51351 -12.31692 -12.20313 -12.10872 -11.89280 -11.87903 -11.67473 -11.62085 -11.31390 -10.97172 -10.77004 -10.19081 -9.95499 -9.88593 -9.87343 -9.41417 -4.92799 -0.01341 0.43937 0.54721 1.06714 1.25894 1.35131 1.53232 1.66408 1.74531 1.99013 2.83287 2.99157 3.18965 3.27337 3.30492 3.32296 3.38148 3.52371 3.55583 3.67332 3.72768 3.85432 3.96358 3.97456 4.00412 4.03848 4.09418 4.10115 4.18759 4.22803 4.30338 4.36103 4.43958 4.49140 4.56023 4.59057 4.59514 4.65230 4.69879 4.73510 4.76475 4.89451 4.93152 4.93689 4.98798 5.13211 5.20430 5.22569 5.28414 5.52068 5.57618 5.57804 5.68380 6.02549 6.39741 6.52469 6.87209 6.98537 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.048 4.048 3 Si 0.794 3.206 4 C -0.226 4.226 5 C 0.056 3.944 6 N -0.361 5.361 7 C 0.119 3.881 8 C 0.517 3.483 9 O -0.560 6.560 10 N -0.634 5.634 11 C 0.096 3.904 12 C -0.119 4.119 13 C 0.129 3.871 14 C -0.117 4.117 15 C -0.150 4.150 16 C 0.068 3.932 17 F -0.240 7.240 18 C -0.123 4.123 19 N -0.293 5.293 20 C 0.113 3.887 21 C -0.043 4.043 22 C -0.113 4.113 23 C -0.132 4.132 24 C -0.113 4.113 25 C -0.125 4.125 26 C -0.111 4.111 27 H 0.402 0.598 28 H 0.077 0.923 29 H -0.284 1.284 30 H -0.288 1.288 31 H 0.199 0.801 32 H 0.137 0.863 33 H 0.167 0.833 34 H 0.103 0.897 35 H 0.109 0.891 36 H 0.106 0.894 37 H 0.123 0.877 38 H 0.059 0.941 39 H 0.133 0.867 40 H 0.054 0.946 41 H 0.112 0.888 42 H 0.078 0.922 43 H 0.130 0.870 44 H 0.046 0.954 45 H 0.110 0.890 46 H 0.141 0.859 47 H 0.150 0.850 48 H 0.153 0.847 49 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.106 8.987 1.964 10.073 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.371 6.371 2 C -0.157 4.157 3 Si 0.697 3.303 4 C -0.237 4.237 5 C -0.089 4.089 6 N -0.143 5.143 7 C -0.005 4.005 8 C 0.306 3.694 9 O -0.437 6.437 10 N -0.369 5.369 11 C -0.025 4.025 12 C -0.156 4.156 13 C 0.044 3.956 14 C -0.155 4.155 15 C -0.169 4.169 16 C 0.014 3.986 17 F -0.222 7.222 18 C -0.161 4.161 19 N -0.114 5.114 20 C -0.052 4.052 21 C -0.044 4.044 22 C -0.132 4.132 23 C -0.150 4.150 24 C -0.132 4.132 25 C -0.142 4.142 26 C -0.129 4.129 27 H 0.253 0.747 28 H 0.095 0.905 29 H -0.211 1.211 30 H -0.215 1.215 31 H 0.216 0.784 32 H 0.155 0.845 33 H 0.184 0.816 34 H 0.121 0.879 35 H 0.127 0.873 36 H 0.124 0.876 37 H 0.141 0.859 38 H 0.077 0.923 39 H 0.151 0.849 40 H 0.073 0.927 41 H 0.130 0.870 42 H 0.096 0.904 43 H 0.148 0.852 44 H 0.065 0.935 45 H 0.128 0.872 46 H 0.159 0.841 47 H 0.167 0.833 48 H 0.170 0.830 49 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 4.496 8.091 3.541 9.910 hybrid contribution -0.206 -0.708 -0.523 0.904 sum 4.290 7.383 3.018 9.056 Atomic orbital electron populations 1.86409 1.17859 1.81484 1.51378 1.24276 0.85288 1.11374 0.94750 0.93959 0.77321 0.73606 0.85425 1.19906 1.12360 0.92010 0.99414 1.22603 1.00261 0.95946 0.90064 1.48097 1.48446 1.03668 1.14093 1.21813 0.96756 1.05696 0.76251 1.20587 0.86073 0.80507 0.82235 1.90810 1.27932 1.44576 1.80423 1.49730 1.28642 1.55213 1.03310 1.23438 0.90226 1.00447 0.88363 1.23313 0.96841 0.97145 0.98308 1.22582 0.95438 0.95780 0.81843 1.23243 0.95071 0.93792 1.03427 1.23052 0.98328 0.96546 0.99011 1.22250 1.00391 0.75111 1.00884 1.92726 1.94617 1.39360 1.95478 1.23040 0.96108 0.93479 1.03448 1.77687 1.20807 1.03824 1.09106 1.21041 0.98332 0.93689 0.92182 1.18040 0.97767 0.92278 0.96360 1.21277 1.00026 0.93075 0.98853 1.21346 0.97755 0.99555 0.96304 1.21652 0.95039 0.97710 0.98774 1.21488 1.00699 0.93246 0.98799 1.22106 0.94619 1.02018 0.94192 0.74656 0.90482 1.21085 1.21462 0.78433 0.84526 0.81568 0.87912 0.87290 0.87565 0.85924 0.92263 0.84861 0.92706 0.87027 0.90367 0.85239 0.93519 0.87189 0.84114 0.83252 0.82969 0.82314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.99 10.07 -148.98 -1.50 -2.49 16 2 C -0.05 -0.13 1.99 71.24 0.14 0.01 16 3 Si 0.79 -2.22 30.78 68.60 2.11 -0.10 16 4 C -0.23 -2.44 5.37 -19.95 -0.11 -2.54 16 5 C 0.06 0.46 9.96 83.47 0.83 1.29 16 6 N -0.36 -3.87 3.41 -351.89 -1.20 -5.07 16 7 C 0.12 0.19 6.82 85.64 0.58 0.77 16 8 C 0.52 4.33 8.10 87.66 0.71 5.04 16 9 O -0.56 -11.47 15.47 -3.00 -0.05 -11.52 16 10 N -0.63 -0.44 3.69 -820.58 -3.03 -3.47 16 11 C 0.10 -0.92 8.44 82.36 0.69 -0.23 16 12 C -0.12 1.20 8.25 30.84 0.25 1.46 16 13 C 0.13 -0.21 1.43 -0.57 0.00 -0.21 16 14 C -0.12 0.07 7.51 30.93 0.23 0.30 16 15 C -0.15 -0.84 4.09 -10.17 -0.04 -0.88 16 16 C 0.07 0.20 7.35 71.98 0.53 0.73 16 17 F -0.24 -2.68 17.36 44.97 0.78 -1.90 16 18 C -0.12 -0.20 7.19 30.93 0.22 0.02 16 19 N -0.29 -5.44 11.62 -48.16 -0.56 -6.00 16 20 C 0.11 1.85 6.74 42.53 0.29 2.14 16 21 C -0.04 -0.62 5.80 -20.04 -0.12 -0.73 16 22 C -0.11 -1.49 9.75 22.48 0.22 -1.27 16 23 C -0.13 -1.06 10.03 22.24 0.22 -0.84 16 24 C -0.11 -0.58 10.04 22.31 0.22 -0.36 16 25 C -0.12 -0.69 10.03 22.24 0.22 -0.46 16 26 C -0.11 -1.10 8.94 22.48 0.20 -0.90 16 27 H 0.40 -3.93 8.74 -74.05 -0.65 -4.57 16 28 H 0.08 0.09 7.84 -2.39 -0.02 0.07 16 29 H -0.28 -0.59 7.04 99.48 0.70 0.11 16 30 H -0.29 -0.67 7.11 99.48 0.71 0.04 16 31 H 0.20 0.19 6.36 -2.91 -0.02 0.17 16 32 H 0.14 -0.41 8.14 -2.39 -0.02 -0.43 16 33 H 0.17 -1.31 8.07 -2.39 -0.02 -1.33 16 34 H 0.10 -1.18 8.14 -2.39 -0.02 -1.20 16 35 H 0.11 -1.57 8.14 -2.39 -0.02 -1.59 16 36 H 0.11 -1.12 8.14 -2.39 -0.02 -1.14 16 37 H 0.12 -1.79 8.14 -2.39 -0.02 -1.81 16 38 H 0.06 0.18 8.14 -2.39 -0.02 0.16 16 39 H 0.13 -0.92 7.97 -2.39 -0.02 -0.94 16 40 H 0.05 0.88 7.73 -2.39 -0.02 0.86 16 41 H 0.11 -0.47 7.95 -2.39 -0.02 -0.49 16 42 H 0.08 0.15 8.14 -2.39 -0.02 0.13 16 43 H 0.13 -0.66 8.10 -2.38 -0.02 -0.68 16 44 H 0.05 0.42 7.86 -2.39 -0.02 0.41 16 45 H 0.11 1.55 8.06 -2.91 -0.02 1.52 16 46 H 0.14 0.50 8.06 -2.91 -0.02 0.47 16 47 H 0.15 -0.10 8.06 -2.91 -0.02 -0.12 16 48 H 0.15 -0.07 8.06 -2.91 -0.02 -0.10 16 49 H 0.16 1.32 4.50 -2.91 -0.01 1.31 16 Total: 0.00 -38.62 408.71 2.24 -36.38 By element: Atomic # 1 Polarization: -9.53 SS G_CDS: 0.37 Total: -9.17 kcal Atomic # 6 Polarization: -1.97 SS G_CDS: 5.31 Total: 3.35 kcal Atomic # 7 Polarization: -9.76 SS G_CDS: -4.78 Total: -14.54 kcal Atomic # 8 Polarization: -12.46 SS G_CDS: -1.55 Total: -14.01 kcal Atomic # 9 Polarization: -2.68 SS G_CDS: 0.78 Total: -1.90 kcal Atomic # 14 Polarization: -2.22 SS G_CDS: 2.11 Total: -0.10 kcal Total: -38.62 2.24 -36.38 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_12622748.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 107.033 kcal (2) G-P(sol) polarization free energy of solvation -38.617 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.417 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.237 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.380 kcal (6) G-S(sol) free energy of system = (1) + (5) 70.654 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds