Wall clock time and date at job start Tue Mar 9 2021 13:46:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86293 * 109.47227 * 2 1 4 4 C 1.50697 * 109.46745 * 240.00175 * 2 1 3 5 5 C 1.31120 * 118.54866 * 120.01762 * 4 2 1 6 6 N 1.38966 * 121.87515 * 179.63948 * 5 4 2 7 7 C 1.47030 * 118.85595 * 13.18206 * 6 5 4 8 8 C 1.50698 * 109.81896 * 196.87519 * 7 6 5 9 9 O 1.21273 * 120.00236 * 19.14189 * 8 7 6 10 10 N 1.34780 * 119.99837 * 199.13281 * 8 7 6 11 11 C 1.47795 * 134.67622 * 359.96181 * 10 8 7 12 12 C 1.54133 * 86.35734 * 203.85730 * 11 10 8 13 13 C 1.46523 * 134.67928 * 179.97438 * 10 8 7 14 14 C 1.52793 * 121.36929 * 30.53889 * 13 10 8 15 15 C 1.53980 * 86.74282 * 258.63966 * 14 13 10 16 16 C 1.53003 * 113.57463 * 220.67141 * 15 14 13 17 17 F 1.39901 * 109.47052 * 298.58464 * 16 15 14 18 18 C 1.53043 * 121.37010 * 281.40840 * 13 10 8 19 19 C 1.53538 * 107.70893 * 316.44715 * 7 6 5 20 20 C 1.50208 * 118.55013 * 300.00268 * 4 2 1 21 21 H 0.96703 * 113.99414 * 299.99533 * 1 2 3 22 22 H 1.09001 * 109.47074 * 120.00797 * 2 1 3 23 23 H 1.48502 * 110.00386 * 300.00627 * 3 2 1 24 24 H 1.48507 * 109.99932 * 61.32253 * 3 2 1 25 25 H 1.08006 * 119.07022 * 359.59969 * 5 4 2 26 26 H 0.96998 * 120.58126 * 193.29100 * 6 5 4 27 27 H 1.09000 * 109.81705 * 76.02012 * 7 6 5 28 28 H 1.08998 * 113.72909 * 89.49650 * 11 10 8 29 29 H 1.08996 * 113.82579 * 318.23112 * 11 10 8 30 30 H 1.09000 * 113.80559 * 222.91981 * 12 11 10 31 31 H 1.09003 * 113.91207 * 91.43169 * 12 11 10 32 32 H 1.08998 * 113.66557 * 144.18187 * 14 13 10 33 33 H 1.08994 * 113.67165 * 13.09488 * 14 13 10 34 34 H 1.09002 * 113.57689 * 89.96689 * 15 14 13 35 35 H 1.08995 * 109.46994 * 58.58786 * 16 15 14 36 36 H 1.09003 * 109.47041 * 178.58886 * 16 15 14 37 37 H 1.08999 * 113.74380 * 346.91608 * 18 13 10 38 38 H 1.09003 * 113.66576 * 215.78053 * 18 13 10 39 39 H 1.09007 * 109.61810 * 180.64135 * 19 7 6 40 40 H 1.08997 * 109.62813 * 301.01028 * 19 7 6 41 41 H 1.08995 * 109.33132 * 79.81501 * 20 4 2 42 42 H 1.09003 * 109.32515 * 320.32670 * 20 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9312 -0.7104 -1.2305 5 6 2.6833 -0.0461 -2.0745 6 7 3.1898 -0.6350 -3.2268 7 6 2.6460 -1.9308 -3.6593 8 6 3.5829 -2.5731 -4.6495 9 8 4.7383 -2.2105 -4.7145 10 7 3.1367 -3.5508 -5.4629 11 6 1.8376 -4.2280 -5.6582 12 6 2.6494 -5.4068 -6.2302 13 6 3.7425 -4.3744 -6.5125 14 6 5.2221 -4.7532 -6.4715 15 6 5.4455 -3.6410 -7.5127 16 6 6.4389 -4.0224 -8.6120 17 9 7.6895 -4.2815 -8.0410 18 6 3.9728 -3.8254 -7.9224 19 6 2.5137 -2.8204 -2.4149 20 6 1.5484 -2.1483 -1.4358 21 1 -0.3932 0.4417 0.7651 22 1 1.7923 -0.5140 0.8899 23 1 1.5614 2.4680 -1.2084 24 1 1.5880 2.4585 1.2243 25 1 2.9154 0.9885 -1.8686 26 1 3.8910 -0.1996 -3.7362 27 1 1.6671 -1.7867 -4.1165 28 1 1.1951 -3.7411 -6.3918 29 1 1.3192 -4.4626 -4.7286 30 1 2.2155 -5.8448 -7.1290 31 1 2.9299 -6.1524 -5.4861 32 1 5.4280 -5.7545 -6.8499 33 1 5.6981 -4.5554 -5.5112 34 1 5.6565 -2.6668 -7.0715 35 1 6.0839 -4.9137 -9.1293 36 1 6.5273 -3.2007 -9.3229 37 1 3.4525 -2.8880 -8.1189 38 1 3.8269 -4.5655 -8.7093 39 1 2.1225 -3.7964 -2.7027 40 1 3.4901 -2.9414 -1.9458 41 1 0.5357 -2.1985 -1.8357 42 1 1.5825 -2.6707 -0.4797 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17321334_15413834.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:06 Heat of formation + Delta-G solvation = -29.729462 kcal Electronic energy + Delta-G solvation = -24894.935063 eV Core-core repulsion = 21179.262101 eV Total energy + Delta-G solvation = -3715.672962 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.153 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -48.43157 -42.31327 -40.54692 -38.87259 -37.39521 -37.10178 -33.27026 -33.22790 -30.90350 -29.21743 -27.36979 -26.96078 -25.33929 -24.80451 -23.77767 -22.55272 -21.42976 -19.44876 -19.00559 -18.50672 -18.34135 -17.61293 -17.24040 -17.15843 -16.84190 -16.46207 -16.16780 -16.06942 -15.48398 -15.36195 -14.99270 -14.67146 -14.50396 -14.28532 -14.08452 -13.73752 -13.63737 -13.59829 -13.53593 -13.49967 -12.94593 -12.83921 -12.60023 -12.34761 -12.19140 -11.72305 -11.71494 -11.66156 -11.56123 -11.25613 -11.03878 -10.66142 -10.24770 -9.82383 -8.42120 -4.89661 1.29859 1.36689 1.47613 1.58680 1.64297 2.02351 2.53225 3.05517 3.23933 3.28927 3.35533 3.50707 3.53995 3.58918 3.74528 3.91090 3.98556 4.00041 4.02450 4.05752 4.11150 4.17819 4.20465 4.33225 4.41784 4.53582 4.56789 4.59861 4.61165 4.64075 4.70005 4.76978 4.84343 4.88347 4.98216 4.99653 5.11620 5.23335 5.31562 5.35139 5.58050 6.30243 6.55016 6.60526 6.83456 7.04379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.049 4.049 3 Si 0.662 3.338 4 C -0.233 4.233 5 C 0.143 3.857 6 N -0.731 5.731 7 C 0.142 3.858 8 C 0.535 3.465 9 O -0.524 6.524 10 N -0.621 5.621 11 C 0.099 3.901 12 C -0.137 4.137 13 C 0.141 3.859 14 C -0.126 4.126 15 C -0.142 4.142 16 C 0.072 3.928 17 F -0.215 7.215 18 C -0.125 4.125 19 C -0.125 4.125 20 C -0.050 4.050 21 H 0.373 0.627 22 H 0.067 0.933 23 H -0.259 1.259 24 H -0.264 1.264 25 H 0.134 0.866 26 H 0.409 0.591 27 H 0.087 0.913 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.092 0.908 31 H 0.099 0.901 32 H 0.098 0.902 33 H 0.082 0.918 34 H 0.106 0.894 35 H 0.075 0.925 36 H 0.074 0.926 37 H 0.077 0.923 38 H 0.103 0.897 39 H 0.077 0.923 40 H 0.077 0.923 41 H 0.068 0.932 42 H 0.073 0.927 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.094 -2.977 -1.604 4.584 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.160 4.160 3 Si 0.565 3.435 4 C -0.243 4.243 5 C 0.022 3.978 6 N -0.365 5.365 7 C 0.033 3.967 8 C 0.323 3.677 9 O -0.399 6.399 10 N -0.357 5.357 11 C -0.023 4.023 12 C -0.175 4.175 13 C 0.055 3.945 14 C -0.164 4.164 15 C -0.161 4.161 16 C 0.017 3.983 17 F -0.197 7.197 18 C -0.164 4.164 19 C -0.164 4.164 20 C -0.087 4.087 21 H 0.221 0.779 22 H 0.085 0.915 23 H -0.184 1.184 24 H -0.189 1.189 25 H 0.150 0.850 26 H 0.246 0.754 27 H 0.105 0.895 28 H 0.108 0.892 29 H 0.106 0.894 30 H 0.110 0.890 31 H 0.117 0.883 32 H 0.116 0.884 33 H 0.100 0.900 34 H 0.124 0.876 35 H 0.093 0.907 36 H 0.092 0.908 37 H 0.096 0.904 38 H 0.121 0.879 39 H 0.095 0.905 40 H 0.096 0.904 41 H 0.086 0.914 42 H 0.092 0.908 Dipole moment (debyes) X Y Z Total from point charges -2.549 -2.182 -2.060 3.937 hybrid contribution -0.906 0.270 0.415 1.033 sum -3.455 -1.912 -1.645 4.278 Atomic orbital electron populations 1.86599 1.18832 1.79894 1.49366 1.24542 0.83637 1.09240 0.98609 0.95519 0.92124 0.75851 0.80029 1.19931 1.09667 0.96438 0.98236 1.20244 0.95865 0.95463 0.86179 1.44249 1.44013 1.20777 1.27428 1.20903 0.95769 0.85630 0.94366 1.20342 0.88562 0.77866 0.80889 1.90730 1.18310 1.61211 1.69689 1.49775 1.13591 1.36709 1.35590 1.23306 0.86960 0.90633 1.01420 1.23358 0.95408 0.96197 1.02551 1.22322 0.95045 0.88225 0.88861 1.22977 0.93939 0.98832 1.00609 1.23194 0.94531 1.01439 0.96887 1.21962 0.79383 1.01942 0.94990 1.92783 1.44100 1.95757 1.87019 1.23149 0.95413 1.02287 0.95502 1.21862 1.01805 0.97840 0.94877 1.19913 0.98057 0.91850 0.98916 0.77942 0.91541 1.18361 1.18940 0.84970 0.75382 0.89500 0.89157 0.89392 0.88991 0.88300 0.88389 0.89976 0.87580 0.90700 0.90790 0.90396 0.87857 0.90464 0.90399 0.91404 0.90800 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -1.03 12.76 -35.23 -0.45 -1.48 16 2 C -0.05 -0.04 2.82 36.00 0.10 0.06 16 3 Si 0.66 0.03 29.68 -169.99 -5.04 -5.02 16 4 C -0.23 -0.35 5.48 -101.34 -0.56 -0.91 16 5 C 0.14 0.16 9.63 -16.06 -0.15 0.00 16 6 N -0.73 -0.94 5.47 -55.33 -0.30 -1.25 16 7 C 0.14 0.09 3.12 -68.52 -0.21 -0.13 16 8 C 0.53 1.01 7.31 -10.99 -0.08 0.93 16 9 O -0.52 -2.73 15.61 5.56 0.09 -2.65 16 10 N -0.62 0.27 3.61 -163.02 -0.59 -0.32 16 11 C 0.10 -0.35 8.62 -2.92 -0.03 -0.38 16 12 C -0.14 0.52 8.06 -26.18 -0.21 0.31 16 13 C 0.14 -0.18 1.57 -132.09 -0.21 -0.39 16 14 C -0.13 -0.03 7.06 -26.33 -0.19 -0.21 16 15 C -0.14 -0.03 4.12 -89.62 -0.37 -0.40 16 16 C 0.07 -0.02 7.37 37.16 0.27 0.26 16 17 F -0.22 -0.77 17.24 2.25 0.04 -0.73 16 18 C -0.12 0.25 7.55 -26.20 -0.20 0.06 16 19 C -0.13 0.00 5.47 -26.43 -0.14 -0.14 16 20 C -0.05 -0.04 5.75 -28.10 -0.16 -0.20 16 21 H 0.37 -0.67 8.74 45.56 0.40 -0.27 16 22 H 0.07 -0.03 7.96 -51.93 -0.41 -0.44 16 23 H -0.26 -0.81 7.11 56.52 0.40 -0.41 16 24 H -0.26 -0.59 7.11 56.52 0.40 -0.19 16 25 H 0.13 -0.05 4.37 -52.48 -0.23 -0.28 16 26 H 0.41 0.50 8.10 -40.82 -0.33 0.17 16 27 H 0.09 -0.01 8.14 -51.93 -0.42 -0.43 16 28 H 0.09 -0.41 8.14 -51.93 -0.42 -0.84 16 29 H 0.09 -0.41 7.68 -51.93 -0.40 -0.81 16 30 H 0.09 -0.48 8.14 -51.93 -0.42 -0.91 16 31 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 32 H 0.10 -0.12 8.10 -51.93 -0.42 -0.54 16 33 H 0.08 0.24 7.90 -51.93 -0.41 -0.17 16 34 H 0.11 0.31 7.51 -51.93 -0.39 -0.08 16 35 H 0.07 -0.18 7.98 -51.93 -0.41 -0.59 16 36 H 0.07 -0.10 8.14 -51.93 -0.42 -0.52 16 37 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 38 H 0.10 -0.42 7.99 -51.93 -0.41 -0.83 16 39 H 0.08 -0.12 7.69 -51.92 -0.40 -0.52 16 40 H 0.08 0.11 8.14 -51.93 -0.42 -0.32 16 41 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 42 H 0.07 0.04 8.14 -51.93 -0.42 -0.38 16 LS Contribution 339.79 15.07 5.12 5.12 Total: 0.00 -7.79 339.79 -9.69 -17.48 By element: Atomic # 1 Polarization: -3.59 SS G_CDS: -6.42 Total: -10.02 kcal Atomic # 6 Polarization: 0.98 SS G_CDS: -2.13 Total: -1.15 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -0.89 Total: -1.57 kcal Atomic # 8 Polarization: -3.76 SS G_CDS: -0.36 Total: -4.12 kcal Atomic # 9 Polarization: -0.77 SS G_CDS: 0.04 Total: -0.73 kcal Atomic # 14 Polarization: 0.03 SS G_CDS: -5.04 Total: -5.02 kcal Total LS contribution 5.12 Total: 5.12 kcal Total: -7.79 -9.69 -17.48 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_15413834.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -12.245 kcal (2) G-P(sol) polarization free energy of solvation -7.790 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.485 kcal (6) G-S(sol) free energy of system = (1) + (5) -29.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds