Wall clock time and date at job start Tue Mar 9 2021 13:46:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86300 * 109.47030 * 2 1 4 4 C 1.50700 * 109.46837 * 119.99435 * 2 1 3 5 5 C 1.38267 * 119.94480 * 244.72721 * 4 2 1 6 6 C 1.38145 * 120.05357 * 179.72783 * 5 4 2 7 7 C 1.38735 * 119.94161 * 0.57394 * 6 5 4 8 8 O 1.35899 * 120.05497 * 179.68720 * 7 6 5 9 9 C 1.42907 * 117.00096 * 0.02562 * 8 7 6 10 10 C 1.50695 * 109.47147 * 180.02562 * 9 8 7 11 11 O 1.21285 * 120.00321 * 0.02562 * 10 9 8 12 12 N 1.34779 * 119.99983 * 180.02562 * 10 9 8 13 13 C 1.47215 * 136.17872 * 359.97438 * 12 10 9 14 14 C 1.53624 * 88.20504 * 206.41820 * 13 12 10 15 15 C 1.46282 * 136.18130 * 179.63106 * 12 10 9 16 16 C 1.53067 * 120.98484 * 27.45247 * 15 12 10 17 17 C 1.53920 * 86.84509 * 259.66315 * 16 15 12 18 18 C 1.53000 * 113.65917 * 220.53281 * 17 16 15 19 19 F 1.39906 * 109.47076 * 277.70503 * 18 17 16 20 20 C 1.53076 * 120.98671 * 279.41116 * 15 12 10 21 21 C 1.38733 * 119.88943 * 359.69894 * 7 6 5 22 22 C 1.38144 * 119.94754 * 0.02562 * 21 7 6 23 23 H 0.96700 * 114.00022 * 300.00827 * 1 2 3 24 24 H 1.08997 * 109.47097 * 240.00027 * 2 1 3 25 25 H 1.48506 * 110.00048 * 178.68200 * 3 2 1 26 26 H 1.48502 * 109.99996 * 299.99525 * 3 2 1 27 27 H 1.07997 * 119.97016 * 359.97438 * 5 4 2 28 28 H 1.07992 * 120.02999 * 180.25116 * 6 5 4 29 29 H 1.08994 * 109.47061 * 300.00941 * 9 8 7 30 30 H 1.09004 * 109.46307 * 60.00794 * 9 8 7 31 31 H 1.09001 * 113.43480 * 321.25594 * 13 12 10 32 32 H 1.09008 * 113.43360 * 91.58479 * 13 12 10 33 33 H 1.08997 * 114.27768 * 88.17144 * 14 13 12 34 34 H 1.08996 * 114.28377 * 221.02030 * 14 13 12 35 35 H 1.09001 * 113.65433 * 14.14662 * 16 15 12 36 36 H 1.09001 * 113.65453 * 145.17285 * 16 15 12 37 37 H 1.08995 * 113.58915 * 89.72142 * 17 16 15 38 38 H 1.09002 * 109.47457 * 37.70196 * 18 17 16 39 39 H 1.09001 * 109.47441 * 157.70699 * 18 17 16 40 40 H 1.09002 * 113.65070 * 214.82507 * 20 15 12 41 41 H 1.08995 * 113.64978 * 345.76421 * 20 15 12 42 42 H 1.08004 * 120.02436 * 180.02562 * 21 7 6 43 43 H 1.07990 * 119.97442 * 179.97438 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 1.2306 5 6 2.6436 -0.0121 2.1881 6 6 3.1002 -0.6597 3.3197 7 6 2.8538 -2.0144 3.4891 8 8 3.3074 -2.6552 4.5984 9 6 4.0307 -1.8719 5.5500 10 6 4.4514 -2.7453 6.7037 11 8 4.1609 -3.9229 6.7102 12 7 5.1505 -2.2180 7.7282 13 6 5.6785 -0.8901 8.0817 14 6 6.7613 -1.5952 8.9127 15 6 5.7155 -2.7103 8.9845 16 6 6.1334 -4.1746 9.1403 17 6 4.8009 -4.3875 9.8807 18 6 4.9166 -5.3009 11.1027 19 9 4.8728 -6.6375 10.6917 20 6 4.8389 -2.8882 10.2267 21 6 2.1438 -2.7140 2.5242 22 6 1.6843 -2.0605 1.3971 23 1 -0.3933 0.4418 0.7650 24 1 1.7923 -0.5138 -0.8900 25 1 3.5346 1.7703 0.0321 26 1 1.5616 2.4679 -1.2086 27 1 2.8396 1.0413 2.0531 28 1 3.6530 -0.1131 4.0693 29 1 4.9150 -1.4478 5.0743 30 1 3.3940 -1.0668 5.9167 31 1 6.0761 -0.3405 7.2285 32 1 4.9898 -0.2955 8.6823 33 1 7.6593 -1.8536 8.3517 34 1 6.9725 -1.1190 9.8701 35 1 6.1994 -4.7135 8.1951 36 1 7.0113 -4.3141 9.7711 37 1 3.9759 -4.6627 9.2236 38 1 5.8607 -5.1083 11.6122 39 1 4.0890 -5.1030 11.7840 40 1 5.3549 -2.6680 11.1613 41 1 3.8693 -2.3960 10.1518 42 1 1.9503 -3.7686 2.6540 43 1 1.1319 -2.6047 0.6455 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_2989410.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:16 Heat of formation + Delta-G solvation = -51.689939 kcal Electronic energy + Delta-G solvation = -26683.421313 eV Core-core repulsion = 22612.625130 eV Total energy + Delta-G solvation = -4070.796183 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.141 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -48.60935 -42.30942 -41.38253 -39.79150 -38.77436 -37.13644 -37.06563 -32.54464 -31.85803 -31.48660 -29.09430 -28.95558 -26.90207 -26.23796 -24.49056 -24.18865 -22.91365 -22.18839 -21.40198 -19.69351 -18.90659 -18.34754 -17.95868 -17.61239 -17.20703 -17.16153 -16.91096 -16.74056 -16.37342 -16.33813 -16.06179 -15.90103 -15.53008 -15.10750 -14.96424 -14.66099 -14.37281 -14.29167 -13.96687 -13.69536 -13.55607 -13.44754 -13.43008 -13.34878 -12.71222 -12.54120 -12.27679 -12.13267 -12.09106 -12.06462 -11.83504 -11.76774 -11.46594 -10.93796 -10.86218 -10.41349 -10.09105 -9.81594 -9.28915 -4.99559 0.22693 0.25941 1.19059 1.33289 1.36969 1.65222 1.98915 2.33603 2.60863 3.14108 3.32591 3.37907 3.43280 3.55037 3.58262 3.65551 3.69145 3.77150 3.89733 3.93612 3.98960 4.06701 4.15391 4.17290 4.25890 4.28447 4.37719 4.44933 4.47173 4.54319 4.61775 4.65600 4.68938 4.74671 4.89463 4.92648 4.96132 5.00293 5.04675 5.11288 5.20598 5.30644 5.36974 5.45423 5.65788 6.24436 6.58891 6.78892 6.94503 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.075 4.075 3 Si 0.784 3.216 4 C -0.160 4.160 5 C -0.072 4.072 6 C -0.199 4.199 7 C 0.118 3.882 8 O -0.323 6.323 9 C 0.049 3.951 10 C 0.531 3.469 11 O -0.572 6.572 12 N -0.632 5.632 13 C 0.097 3.903 14 C -0.122 4.122 15 C 0.128 3.872 16 C -0.137 4.137 17 C -0.152 4.152 18 C 0.066 3.934 19 F -0.245 7.245 20 C -0.105 4.105 21 C -0.168 4.168 22 C -0.061 4.061 23 H 0.395 0.605 24 H 0.102 0.898 25 H -0.281 1.281 26 H -0.303 1.303 27 H 0.158 0.842 28 H 0.164 0.836 29 H 0.120 0.880 30 H 0.125 0.875 31 H 0.105 0.895 32 H 0.113 0.887 33 H 0.099 0.901 34 H 0.126 0.874 35 H 0.039 0.961 36 H 0.121 0.879 37 H 0.061 0.939 38 H 0.105 0.895 39 H 0.090 0.910 40 H 0.139 0.861 41 H 0.075 0.925 42 H 0.123 0.877 43 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.944 11.897 6.849 14.283 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.184 4.184 3 Si 0.690 3.310 4 C -0.161 4.161 5 C -0.089 4.089 6 C -0.217 4.217 7 C 0.073 3.927 8 O -0.236 6.236 9 C -0.029 4.029 10 C 0.321 3.679 11 O -0.451 6.451 12 N -0.368 5.368 13 C -0.023 4.023 14 C -0.160 4.160 15 C 0.043 3.957 16 C -0.175 4.175 17 C -0.171 4.171 18 C 0.011 3.989 19 F -0.226 7.226 20 C -0.144 4.144 21 C -0.186 4.186 22 C -0.079 4.079 23 H 0.245 0.755 24 H 0.119 0.881 25 H -0.208 1.208 26 H -0.231 1.231 27 H 0.175 0.825 28 H 0.182 0.818 29 H 0.138 0.862 30 H 0.142 0.858 31 H 0.123 0.877 32 H 0.131 0.869 33 H 0.117 0.883 34 H 0.144 0.856 35 H 0.058 0.942 36 H 0.139 0.861 37 H 0.079 0.921 38 H 0.124 0.876 39 H 0.109 0.891 40 H 0.157 0.843 41 H 0.094 0.906 42 H 0.141 0.859 43 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges 4.198 11.228 5.731 13.287 hybrid contribution -0.319 -1.544 -0.719 1.733 sum 3.879 9.684 5.012 11.573 Atomic orbital electron populations 1.86471 1.17474 1.82245 1.50475 1.25226 0.85169 1.11231 0.96823 0.93779 0.77722 0.74677 0.84797 1.20385 1.02591 0.94796 0.98313 1.21071 0.95346 1.00212 0.92287 1.21491 1.06177 0.92602 1.01427 1.19243 0.94871 0.92115 0.86433 1.86127 1.69242 1.38551 1.29720 1.22584 0.99012 0.93291 0.88015 1.20209 0.76567 0.87693 0.83436 1.90765 1.55631 1.18904 1.79798 1.49625 1.53744 1.15188 1.18217 1.23409 0.94471 0.84429 1.00032 1.23315 0.95616 0.93911 1.03162 1.22700 0.93225 0.95310 0.84479 1.23201 0.97890 0.96036 1.00380 1.23099 0.98980 0.97493 0.97499 1.22313 1.05496 0.74790 0.96280 1.92728 1.98273 1.39023 1.92606 1.23119 1.00776 0.92354 0.98106 1.20613 1.02500 1.00956 0.94568 1.20917 0.96766 0.94226 0.95976 0.75508 0.88055 1.20827 1.23146 0.82494 0.81825 0.86200 0.85781 0.87692 0.86935 0.88275 0.85553 0.94245 0.86135 0.92095 0.87645 0.89129 0.84283 0.90600 0.85854 0.84934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.48 12.83 -148.98 -1.91 -2.39 16 2 C -0.08 0.02 2.80 71.24 0.20 0.22 16 3 Si 0.78 -2.69 29.80 68.60 2.04 -0.65 16 4 C -0.16 -0.10 5.35 -19.85 -0.11 -0.21 16 5 C -0.07 0.21 8.66 22.25 0.19 0.40 16 6 C -0.20 0.40 9.04 22.37 0.20 0.60 16 7 C 0.12 0.58 6.69 22.51 0.15 0.73 16 8 O -0.32 -2.69 9.67 -73.38 -0.71 -3.40 16 9 C 0.05 -0.03 5.06 71.23 0.36 0.33 16 10 C 0.53 3.38 8.14 87.65 0.71 4.10 16 11 O -0.57 -10.56 16.28 15.99 0.26 -10.30 16 12 N -0.63 0.91 3.69 -820.71 -3.03 -2.12 16 13 C 0.10 -1.17 8.42 82.26 0.69 -0.48 16 14 C -0.12 1.44 8.25 30.82 0.25 1.69 16 15 C 0.13 -0.49 1.44 -0.48 0.00 -0.49 16 16 C -0.14 -0.23 7.18 30.93 0.22 -0.01 16 17 C -0.15 -0.38 4.09 -10.17 -0.04 -0.43 16 18 C 0.07 0.02 7.35 71.98 0.53 0.55 16 19 F -0.24 -2.56 17.36 44.97 0.78 -1.78 16 20 C -0.11 0.61 7.52 30.93 0.23 0.85 16 21 C -0.17 -1.08 9.99 22.37 0.22 -0.85 16 22 C -0.06 -0.24 9.68 22.25 0.22 -0.02 16 23 H 0.39 -2.95 8.70 -74.06 -0.64 -3.59 16 24 H 0.10 0.15 7.96 -2.39 -0.02 0.13 16 25 H -0.28 -0.16 7.11 99.48 0.71 0.55 16 26 H -0.30 -1.42 7.11 99.48 0.71 -0.72 16 27 H 0.16 -1.39 4.90 -2.91 -0.01 -1.41 16 28 H 0.16 -1.53 6.30 -2.91 -0.02 -1.55 16 29 H 0.12 -0.80 7.66 -2.39 -0.02 -0.81 16 30 H 0.12 -0.90 7.66 -2.39 -0.02 -0.92 16 31 H 0.10 -1.67 8.14 -2.39 -0.02 -1.69 16 32 H 0.11 -1.76 8.14 -2.38 -0.02 -1.78 16 33 H 0.10 -1.07 8.14 -2.39 -0.02 -1.09 16 34 H 0.13 -2.14 8.14 -2.39 -0.02 -2.16 16 35 H 0.04 0.41 7.84 -2.39 -0.02 0.39 16 36 H 0.12 -0.45 7.97 -2.39 -0.02 -0.46 16 37 H 0.06 0.72 7.75 -2.39 -0.02 0.70 16 38 H 0.11 -0.61 7.95 -2.39 -0.02 -0.63 16 39 H 0.09 -0.29 8.14 -2.39 -0.02 -0.31 16 40 H 0.14 -1.76 8.10 -2.39 -0.02 -1.78 16 41 H 0.08 -0.36 8.14 -2.39 -0.02 -0.38 16 42 H 0.12 0.92 8.06 -2.91 -0.02 0.89 16 43 H 0.13 0.41 8.06 -2.92 -0.02 0.38 16 Total: 0.00 -31.78 361.25 1.90 -29.88 By element: Atomic # 1 Polarization: -16.66 SS G_CDS: 0.42 Total: -16.24 kcal Atomic # 6 Polarization: 2.95 SS G_CDS: 4.04 Total: 6.99 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: -3.03 Total: -2.12 kcal Atomic # 8 Polarization: -13.72 SS G_CDS: -2.36 Total: -16.09 kcal Atomic # 9 Polarization: -2.56 SS G_CDS: 0.78 Total: -1.78 kcal Atomic # 14 Polarization: -2.69 SS G_CDS: 2.04 Total: -0.65 kcal Total: -31.78 1.90 -29.88 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_2989410.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -21.812 kcal (2) G-P(sol) polarization free energy of solvation -31.776 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -53.589 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.899 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -51.690 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds