Wall clock time and date at job start Tue Mar 9 2021 13:46:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86294 * 109.47269 * 2 1 4 4 C 1.50695 * 109.47329 * 120.00192 * 2 1 3 5 5 C 1.38243 * 119.97464 * 245.00179 * 4 2 1 6 6 C 1.38289 * 120.11231 * 180.02562 * 5 4 2 7 7 C 1.38117 * 120.05983 * 359.97438 * 6 5 4 8 8 C 1.38755 * 119.94118 * 0.02562 * 7 6 5 9 9 O 1.35898 * 120.05839 * 179.97438 * 8 7 6 10 10 C 1.42902 * 116.99730 * 0.02562 * 9 8 7 11 11 C 1.53000 * 109.47419 * 179.97438 * 10 9 8 12 12 C 1.50700 * 109.47460 * 179.97438 * 11 10 9 13 13 O 1.21281 * 119.99479 * 0.02562 * 12 11 10 14 14 N 1.34775 * 119.99956 * 179.97438 * 12 11 10 15 15 C 1.47216 * 136.18315 * 0.02562 * 14 12 11 16 16 C 1.53625 * 88.20444 * 206.41284 * 15 14 12 17 17 C 1.46280 * 136.18008 * 179.63011 * 14 12 11 18 18 C 1.53083 * 120.98464 * 27.45830 * 17 14 12 19 19 C 1.53919 * 86.84216 * 259.66109 * 18 17 14 20 20 C 1.52999 * 113.65524 * 220.52742 * 19 18 17 21 21 F 1.39907 * 109.47141 * 277.70741 * 20 19 18 22 22 C 1.53073 * 120.98834 * 279.42201 * 17 14 12 23 23 C 1.38166 * 119.97278 * 65.00122 * 4 2 1 24 24 H 0.96701 * 113.99470 * 299.99610 * 1 2 3 25 25 H 1.09005 * 109.46877 * 240.00114 * 2 1 3 26 26 H 1.48503 * 110.00243 * 300.00546 * 3 2 1 27 27 H 1.48501 * 110.00108 * 61.31812 * 3 2 1 28 28 H 1.08000 * 119.94011 * 359.97438 * 5 4 2 29 29 H 1.08001 * 119.96912 * 179.97438 * 6 5 4 30 30 H 1.07995 * 120.03380 * 179.97438 * 7 6 5 31 31 H 1.09000 * 109.47521 * 300.00502 * 10 9 8 32 32 H 1.09007 * 109.47162 * 60.00566 * 10 9 8 33 33 H 1.09000 * 109.47211 * 300.00725 * 11 10 9 34 34 H 1.09007 * 109.46464 * 60.00172 * 11 10 9 35 35 H 1.09003 * 113.43146 * 321.24772 * 15 14 12 36 36 H 1.08994 * 113.43555 * 91.57053 * 15 14 12 37 37 H 1.09002 * 114.28207 * 88.16377 * 16 15 14 38 38 H 1.08997 * 114.28069 * 221.01720 * 16 15 14 39 39 H 1.08996 * 113.64982 * 14.14924 * 18 17 14 40 40 H 1.08994 * 113.65158 * 145.17191 * 18 17 14 41 41 H 1.08994 * 113.58551 * 89.72497 * 19 18 17 42 42 H 1.09000 * 109.47243 * 37.70769 * 20 19 18 43 43 H 1.08997 * 109.47134 * 157.71298 * 20 19 18 44 44 H 1.09001 * 113.65244 * 214.82353 * 22 17 14 45 45 H 1.08993 * 113.65267 * 345.75628 * 22 17 14 46 46 H 1.08002 * 120.02702 * 0.27001 * 23 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 1.2304 5 6 2.6388 -0.0117 2.1909 6 6 3.1016 -0.6609 3.3208 7 6 2.8575 -2.0095 3.4927 8 6 2.1478 -2.7130 2.5301 9 8 1.9068 -4.0401 2.6965 10 6 2.4131 -4.6470 3.8871 11 6 2.0458 -6.1322 3.8983 12 6 2.5803 -6.7725 5.1535 13 8 3.1941 -6.1062 5.9599 14 7 2.3752 -8.0851 5.3804 15 6 1.7071 -9.1928 4.6777 16 6 1.4937 -9.8656 6.0422 17 6 2.7240 -9.0417 6.4306 18 6 2.9421 -8.5822 7.8744 19 6 4.4510 -8.6517 7.5786 20 6 5.2763 -9.2301 8.7299 21 9 5.5324 -8.2264 9.6703 22 6 4.1139 -9.6806 6.4848 23 6 1.6846 -2.0595 1.3976 24 1 -0.3932 0.4417 0.7651 25 1 1.7923 -0.5138 -0.8900 26 1 1.5615 2.4679 -1.2084 27 1 1.5880 2.4585 1.2242 28 1 2.8310 1.0427 2.0582 29 1 3.6543 -0.1130 4.0696 30 1 3.2195 -2.5161 4.3751 31 1 3.4975 -4.5403 3.9165 32 1 1.9761 -4.1586 4.7581 33 1 0.9614 -6.2386 3.8690 34 1 2.4825 -6.6210 3.0273 35 1 0.7780 -8.8987 4.1894 36 1 2.3713 -9.7512 4.0182 37 1 0.5743 -9.5712 6.5483 38 1 1.6601 -10.9428 6.0417 39 1 2.5811 -7.5728 8.0713 40 1 2.6086 -9.3054 8.6186 41 1 4.8625 -7.7204 7.1895 42 1 4.7210 -10.0393 9.2042 43 1 6.2199 -9.6148 8.3430 44 1 4.1081 -10.7110 6.8404 45 1 4.6904 -9.5519 5.5687 46 1 1.1357 -2.6059 0.6448 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:22 Heat of formation + Delta-G solvation = -58.973081 kcal Electronic energy + Delta-G solvation = -28354.232478 eV Core-core repulsion = 24127.582855 eV Total energy + Delta-G solvation = -4226.649622 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.157 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -48.60256 -42.27929 -41.36216 -39.81814 -39.07528 -37.41364 -37.05770 -33.46868 -32.53945 -31.32247 -30.41573 -29.07619 -27.07991 -26.90182 -25.53275 -24.48562 -23.74316 -22.70472 -21.88629 -21.31253 -19.57207 -18.89333 -18.10536 -17.74915 -17.62471 -17.27976 -17.18025 -16.97701 -16.93691 -16.72535 -16.49115 -16.19249 -16.15411 -15.57319 -15.38608 -14.94727 -14.88176 -14.56218 -14.25806 -14.16029 -14.05892 -13.64019 -13.45568 -13.40334 -13.24485 -13.00528 -12.93417 -12.70348 -12.55138 -12.45047 -12.07209 -11.99715 -11.90959 -11.81970 -11.60106 -11.46536 -10.97959 -10.86738 -10.67735 -10.00463 -9.79348 -9.33537 -4.91391 0.14539 0.33940 1.26843 1.36061 1.48870 1.60719 1.93830 2.20811 2.60489 3.18963 3.36624 3.38939 3.40910 3.43622 3.57374 3.59637 3.65062 3.71526 3.78540 3.82310 4.02797 4.07154 4.15618 4.17112 4.17313 4.19212 4.28994 4.33575 4.41618 4.50631 4.54876 4.55701 4.56815 4.65103 4.68812 4.69240 4.74528 4.91119 4.93374 4.95121 4.99199 5.03989 5.20487 5.28983 5.32935 5.37270 5.38881 5.64725 6.26149 6.45135 6.63260 6.95387 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.548 6.548 2 C -0.087 4.087 3 Si 0.776 3.224 4 C -0.080 4.080 5 C -0.157 4.157 6 C -0.076 4.076 7 C -0.211 4.211 8 C 0.116 3.884 9 O -0.324 6.324 10 C 0.078 3.922 11 C -0.124 4.124 12 C 0.540 3.460 13 O -0.580 6.580 14 N -0.634 5.634 15 C 0.098 3.902 16 C -0.124 4.124 17 C 0.125 3.875 18 C -0.134 4.134 19 C -0.149 4.149 20 C 0.066 3.934 21 F -0.244 7.244 22 C -0.107 4.107 23 C -0.139 4.139 24 H 0.386 0.614 25 H 0.126 0.874 26 H -0.301 1.301 27 H -0.280 1.280 28 H 0.148 0.852 29 H 0.152 0.848 30 H 0.133 0.867 31 H 0.065 0.935 32 H 0.062 0.938 33 H 0.121 0.879 34 H 0.122 0.878 35 H 0.097 0.903 36 H 0.107 0.893 37 H 0.098 0.902 38 H 0.123 0.877 39 H 0.043 0.957 40 H 0.118 0.882 41 H 0.065 0.935 42 H 0.103 0.897 43 H 0.090 0.910 44 H 0.136 0.864 45 H 0.074 0.926 46 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.026 -7.284 -1.636 7.466 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.195 4.195 3 Si 0.681 3.319 4 C -0.081 4.081 5 C -0.174 4.174 6 C -0.093 4.093 7 C -0.230 4.230 8 C 0.071 3.929 9 O -0.238 6.238 10 C 0.003 3.997 11 C -0.163 4.163 12 C 0.331 3.669 13 O -0.461 6.461 14 N -0.367 5.367 15 C -0.023 4.023 16 C -0.162 4.162 17 C 0.040 3.960 18 C -0.172 4.172 19 C -0.168 4.168 20 C 0.011 3.989 21 F -0.225 7.225 22 C -0.145 4.145 23 C -0.158 4.158 24 H 0.236 0.764 25 H 0.144 0.856 26 H -0.230 1.230 27 H -0.207 1.207 28 H 0.165 0.835 29 H 0.169 0.831 30 H 0.151 0.849 31 H 0.083 0.917 32 H 0.080 0.920 33 H 0.139 0.861 34 H 0.140 0.860 35 H 0.116 0.884 36 H 0.125 0.875 37 H 0.117 0.883 38 H 0.141 0.859 39 H 0.062 0.938 40 H 0.136 0.864 41 H 0.084 0.916 42 H 0.122 0.878 43 H 0.108 0.892 44 H 0.154 0.846 45 H 0.092 0.908 46 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 0.153 -6.306 -1.920 6.594 hybrid contribution -0.805 0.379 0.881 1.253 sum -0.652 -5.927 -1.038 6.052 Atomic orbital electron populations 1.86577 1.18405 1.80495 1.50108 1.25351 0.83536 1.12330 0.98272 0.93848 0.90273 0.71341 0.76417 1.20168 0.97845 0.93221 0.96819 1.21214 1.00773 1.00808 0.94642 1.21234 0.97266 0.93316 0.97525 1.21532 1.04285 0.96648 1.00555 1.19157 0.95867 0.82837 0.95074 1.85947 1.74691 1.20461 1.42686 1.22370 0.99077 0.92776 0.85484 1.21333 1.05021 0.93435 0.96511 1.20258 0.78639 0.80742 0.87303 1.90736 1.43448 1.62795 1.49079 1.49694 1.55582 1.05905 1.25567 1.23307 0.98208 0.84149 0.96654 1.23312 0.96315 1.01271 0.95262 1.22676 0.96764 0.87659 0.88903 1.23177 0.95157 1.01734 0.97179 1.23081 0.96286 1.00063 0.97328 1.22296 1.01766 0.88002 0.86803 1.92729 1.95908 1.65412 1.68458 1.23110 0.93597 0.99794 0.98045 1.20348 1.03842 0.94379 0.97234 0.76443 0.85633 1.22952 1.20673 0.83479 0.83068 0.84931 0.91720 0.91971 0.86135 0.85978 0.88423 0.87464 0.88328 0.85875 0.93845 0.86376 0.91614 0.87841 0.89173 0.84605 0.90752 0.85235 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -2.27 12.83 -148.98 -1.91 -4.18 16 2 C -0.09 -0.08 2.80 71.23 0.20 0.12 16 3 Si 0.78 -1.09 29.88 68.60 2.05 0.96 16 4 C -0.08 -0.22 5.35 -19.88 -0.11 -0.32 16 5 C -0.16 -0.13 8.67 22.28 0.19 0.06 16 6 C -0.08 -0.13 10.04 22.25 0.22 0.10 16 7 C -0.21 -1.02 9.04 22.36 0.20 -0.82 16 8 C 0.12 0.78 6.69 22.51 0.15 0.93 16 9 O -0.32 -2.08 10.14 -92.40 -0.94 -3.02 16 10 C 0.08 0.32 4.03 71.98 0.29 0.61 16 11 C -0.12 0.05 5.91 29.85 0.18 0.22 16 12 C 0.54 2.61 8.07 87.66 0.71 3.31 16 13 O -0.58 -7.96 15.76 -3.03 -0.05 -8.00 16 14 N -0.63 0.45 3.69 -820.74 -3.03 -2.58 16 15 C 0.10 -0.91 8.42 82.26 0.69 -0.22 16 16 C -0.12 1.24 8.25 30.83 0.25 1.49 16 17 C 0.13 -0.41 1.44 -0.48 0.00 -0.41 16 18 C -0.13 -0.15 7.18 30.93 0.22 0.07 16 19 C -0.15 -0.25 4.09 -10.18 -0.04 -0.30 16 20 C 0.07 -0.02 7.35 71.98 0.53 0.51 16 21 F -0.24 -2.27 17.36 44.97 0.78 -1.49 16 22 C -0.11 0.58 7.52 30.93 0.23 0.82 16 23 C -0.14 -0.81 9.62 22.37 0.22 -0.59 16 24 H 0.39 -0.56 8.70 -74.06 -0.64 -1.21 16 25 H 0.13 -0.08 7.96 -2.38 -0.02 -0.10 16 26 H -0.30 -1.83 7.11 99.48 0.71 -1.12 16 27 H -0.28 -0.55 7.01 99.48 0.70 0.15 16 28 H 0.15 -0.51 4.84 -2.91 -0.01 -0.52 16 29 H 0.15 -0.46 8.06 -2.91 -0.02 -0.49 16 30 H 0.13 0.53 6.30 -2.91 -0.02 0.51 16 31 H 0.06 0.35 7.62 -2.39 -0.02 0.33 16 32 H 0.06 0.36 7.62 -2.38 -0.02 0.34 16 33 H 0.12 -0.42 8.14 -2.39 -0.02 -0.44 16 34 H 0.12 -0.47 8.14 -2.38 -0.02 -0.49 16 35 H 0.10 -1.14 8.14 -2.39 -0.02 -1.16 16 36 H 0.11 -1.32 8.14 -2.39 -0.02 -1.34 16 37 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 38 H 0.12 -1.84 8.14 -2.39 -0.02 -1.86 16 39 H 0.04 0.39 7.84 -2.39 -0.02 0.37 16 40 H 0.12 -0.45 7.97 -2.39 -0.02 -0.47 16 41 H 0.07 0.65 7.75 -2.39 -0.02 0.64 16 42 H 0.10 -0.62 7.95 -2.39 -0.02 -0.64 16 43 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 44 H 0.14 -1.61 8.10 -2.39 -0.02 -1.63 16 45 H 0.07 -0.31 8.14 -2.39 -0.02 -0.33 16 46 H 0.13 0.75 8.06 -2.91 -0.02 0.72 16 Total: 0.00 -24.15 382.13 1.42 -22.72 By element: Atomic # 1 Polarization: -10.39 SS G_CDS: 0.38 Total: -10.01 kcal Atomic # 6 Polarization: 1.45 SS G_CDS: 4.14 Total: 5.59 kcal Atomic # 7 Polarization: 0.45 SS G_CDS: -3.03 Total: -2.58 kcal Atomic # 8 Polarization: -12.31 SS G_CDS: -2.90 Total: -15.21 kcal Atomic # 9 Polarization: -2.27 SS G_CDS: 0.78 Total: -1.49 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: 2.05 Total: 0.96 kcal Total: -24.15 1.42 -22.72 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.249 kcal (2) G-P(sol) polarization free energy of solvation -24.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -60.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.421 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.724 kcal (6) G-S(sol) free energy of system = (1) + (5) -58.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds