Wall clock time and date at job start Tue Mar 9 2021 13:46:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86306 * 109.47013 * 2 1 4 4 C 1.50703 * 109.47104 * 119.99867 * 2 1 3 5 5 C 1.38246 * 119.97077 * 245.02309 * 4 2 1 6 6 C 1.38291 * 120.11190 * 179.97438 * 5 4 2 7 7 C 1.38130 * 120.05012 * 359.67962 * 6 5 4 8 8 C 1.38745 * 119.94480 * 0.59399 * 7 6 5 9 9 O 1.35905 * 120.05685 * 179.69913 * 8 7 6 10 10 C 1.42901 * 116.99604 * 359.72933 * 9 8 7 11 11 C 1.52998 * 109.47046 * 179.97438 * 10 9 8 12 12 C 1.52998 * 109.47242 * 179.97438 * 11 10 9 13 13 C 1.50703 * 109.47564 * 180.02562 * 12 11 10 14 14 O 1.21283 * 119.99340 * 0.02562 * 13 12 11 15 15 N 1.34768 * 120.00287 * 179.97438 * 13 12 11 16 16 C 1.47217 * 136.18399 * 359.97438 * 15 13 12 17 17 C 1.53623 * 88.20668 * 206.41991 * 16 15 13 18 18 C 1.46289 * 136.18117 * 179.63327 * 15 13 12 19 19 C 1.53073 * 120.98352 * 27.44495 * 18 15 13 20 20 C 1.53920 * 86.84466 * 259.66676 * 19 18 15 21 21 C 1.52999 * 113.65752 * 220.53149 * 20 19 18 22 22 F 1.39898 * 109.47337 * 162.71183 * 21 20 19 23 23 C 1.53075 * 120.98115 * 279.41346 * 18 15 13 24 24 C 1.38159 * 119.97368 * 65.00217 * 4 2 1 25 25 H 0.96693 * 113.99678 * 60.00462 * 1 2 3 26 26 H 1.09000 * 109.47319 * 239.99739 * 2 1 3 27 27 H 1.48498 * 109.99861 * 59.99723 * 3 2 1 28 28 H 1.48496 * 109.99780 * 181.31788 * 3 2 1 29 29 H 1.08001 * 119.94258 * 359.97438 * 5 4 2 30 30 H 1.07997 * 119.97183 * 179.97438 * 6 5 4 31 31 H 1.07997 * 120.02288 * 180.32190 * 7 6 5 32 32 H 1.08996 * 109.47352 * 299.99771 * 10 9 8 33 33 H 1.08999 * 109.47144 * 59.99795 * 10 9 8 34 34 H 1.08998 * 109.47592 * 300.00144 * 11 10 9 35 35 H 1.09007 * 109.46935 * 60.00317 * 11 10 9 36 36 H 1.09004 * 109.47100 * 299.99832 * 12 11 10 37 37 H 1.09004 * 109.47445 * 59.99792 * 12 11 10 38 38 H 1.09002 * 113.43290 * 321.25737 * 16 15 13 39 39 H 1.09004 * 113.43333 * 91.58091 * 16 15 13 40 40 H 1.08994 * 114.27976 * 88.17346 * 17 16 15 41 41 H 1.09003 * 114.28045 * 221.01810 * 17 16 15 42 42 H 1.08997 * 113.65383 * 14.15544 * 19 18 15 43 43 H 1.09004 * 113.65053 * 145.17858 * 19 18 15 44 44 H 1.08993 * 113.58577 * 89.72756 * 20 19 18 45 45 H 1.09004 * 109.47434 * 282.70979 * 21 20 19 46 46 H 1.09005 * 109.47544 * 42.70654 * 21 20 19 47 47 H 1.09008 * 113.64934 * 214.82436 * 23 18 15 48 48 H 1.08997 * 113.65723 * 345.75405 * 23 18 15 49 49 H 1.08006 * 120.02917 * 0.03951 * 24 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 2.6383 -0.0115 2.1912 6 6 3.1002 -0.6604 3.3217 7 6 2.8503 -2.0075 3.4967 8 6 2.1459 -2.7124 2.5313 9 8 1.9040 -4.0393 2.6983 10 6 2.4094 -4.6459 3.8894 11 6 2.0412 -6.1309 3.9011 12 6 2.5829 -6.7805 5.1760 13 6 2.2207 -8.2434 5.1874 14 8 1.5918 -8.7195 4.2662 15 7 2.5967 -9.0227 6.2207 16 6 3.3404 -8.8349 7.4772 17 6 3.7297 -10.3195 7.4124 18 6 2.4414 -10.4287 6.5934 19 6 2.2748 -11.5131 5.5260 20 6 0.7675 -11.4655 5.8344 21 6 0.1025 -12.8431 5.8612 22 9 -1.1294 -12.7536 6.5182 23 6 1.1451 -10.9367 7.2297 24 6 1.6846 -2.0594 1.3978 25 1 -0.3932 0.4416 -0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 1.5614 2.4679 1.2085 28 1 3.5346 1.7703 -0.0321 29 1 2.8303 1.0430 2.0585 30 1 3.6526 -0.1123 4.0706 31 1 3.2067 -2.5127 4.3823 32 1 3.4938 -4.5399 3.9192 33 1 1.9725 -4.1567 4.7599 34 1 0.9568 -6.2366 3.8715 35 1 2.4779 -6.6204 3.0306 36 1 3.6674 -6.6749 5.2052 37 1 2.1466 -6.2911 6.0469 38 1 4.1904 -8.1593 7.3811 39 1 2.7020 -8.5908 8.3264 40 1 4.6412 -10.5196 6.8493 41 1 3.6935 -10.8348 8.3722 42 1 2.5260 -11.1784 4.5196 43 1 2.7451 -12.4609 5.7884 44 1 0.2209 -10.7437 5.2277 45 1 -0.0549 -13.1905 4.8400 46 1 0.7457 -13.5470 6.3893 47 1 1.2996 -11.7233 7.9684 48 1 0.4928 -10.1406 7.5885 49 1 1.1325 -2.6051 0.6468 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_4549616.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:46:25 Heat of formation + Delta-G solvation = -64.747244 kcal Electronic energy + Delta-G solvation = -29844.214396 eV Core-core repulsion = 25461.776768 eV Total energy + Delta-G solvation = -4382.437628 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.173 amu Computer time = 1.21 seconds Orbital eigenvalues (eV) -48.62627 -42.23797 -41.39253 -39.74821 -39.14006 -37.37882 -37.03673 -34.96443 -32.70730 -31.64876 -30.95458 -29.08221 -28.18987 -26.96885 -26.83099 -24.46193 -23.98509 -23.81365 -22.26699 -21.81542 -21.29716 -19.17629 -18.89278 -18.44308 -17.98612 -17.61617 -17.53835 -17.25629 -17.14675 -17.02344 -16.72554 -16.59375 -16.22603 -15.91090 -15.70688 -15.35590 -15.00689 -14.65845 -14.61628 -14.49426 -14.37156 -14.07856 -13.71181 -13.58319 -13.48678 -13.47479 -13.28814 -13.21610 -12.74145 -12.66868 -12.50236 -12.40168 -12.31024 -12.15007 -12.08254 -11.80997 -11.74946 -11.72123 -11.63882 -10.91531 -10.83374 -10.41021 -10.02694 -9.75444 -9.41252 -4.94743 0.05640 0.21921 1.26018 1.45778 1.64142 1.65457 1.94809 2.11879 2.49422 3.19703 3.32887 3.36599 3.38041 3.43468 3.62181 3.64389 3.66444 3.77349 3.77601 3.81874 3.90543 3.98524 4.01973 4.08493 4.13132 4.16675 4.18928 4.25717 4.28477 4.34085 4.37684 4.42785 4.48805 4.56755 4.60138 4.65547 4.70568 4.74017 4.81605 4.83563 4.89671 4.97307 4.99639 5.03219 5.05226 5.12250 5.19017 5.27939 5.28686 5.34443 5.55783 6.28633 6.70244 6.86510 7.05299 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.089 4.089 3 Si 0.788 3.212 4 C -0.053 4.053 5 C -0.183 4.183 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.122 3.878 9 O -0.333 6.333 10 C 0.058 3.942 11 C -0.099 4.099 12 C -0.119 4.119 13 C 0.529 3.471 14 O -0.584 6.584 15 N -0.635 5.635 16 C 0.099 3.901 17 C -0.124 4.124 18 C 0.124 3.876 19 C -0.123 4.123 20 C -0.149 4.149 21 C 0.068 3.932 22 F -0.237 7.237 23 C -0.117 4.117 24 C -0.147 4.147 25 H 0.404 0.596 26 H 0.091 0.909 27 H -0.293 1.293 28 H -0.286 1.286 29 H 0.122 0.878 30 H 0.156 0.844 31 H 0.159 0.841 32 H 0.086 0.914 33 H 0.082 0.918 34 H 0.058 0.942 35 H 0.062 0.938 36 H 0.125 0.875 37 H 0.120 0.880 38 H 0.103 0.897 39 H 0.100 0.900 40 H 0.104 0.896 41 H 0.117 0.883 42 H 0.052 0.948 43 H 0.125 0.875 44 H 0.064 0.936 45 H 0.077 0.923 46 H 0.106 0.894 47 H 0.125 0.875 48 H 0.060 0.940 49 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.137 1.165 4.468 8.500 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.375 6.375 2 C -0.198 4.198 3 Si 0.693 3.307 4 C -0.053 4.053 5 C -0.200 4.200 6 C -0.091 4.091 7 C -0.223 4.223 8 C 0.076 3.924 9 O -0.248 6.248 10 C -0.016 4.016 11 C -0.137 4.137 12 C -0.158 4.158 13 C 0.321 3.679 14 O -0.464 6.464 15 N -0.370 5.370 16 C -0.022 4.022 17 C -0.161 4.161 18 C 0.038 3.962 19 C -0.161 4.161 20 C -0.168 4.168 21 C 0.014 3.986 22 F -0.219 7.219 23 C -0.156 4.156 24 C -0.165 4.165 25 H 0.255 0.745 26 H 0.109 0.891 27 H -0.221 1.221 28 H -0.213 1.213 29 H 0.139 0.861 30 H 0.174 0.826 31 H 0.177 0.823 32 H 0.104 0.896 33 H 0.100 0.900 34 H 0.076 0.924 35 H 0.081 0.919 36 H 0.143 0.857 37 H 0.138 0.862 38 H 0.122 0.878 39 H 0.118 0.882 40 H 0.122 0.878 41 H 0.135 0.865 42 H 0.071 0.929 43 H 0.143 0.857 44 H 0.082 0.918 45 H 0.095 0.905 46 H 0.124 0.876 47 H 0.143 0.857 48 H 0.079 0.921 49 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 7.173 1.207 4.643 8.630 hybrid contribution -0.548 -0.496 -0.125 0.750 sum 6.626 0.711 4.518 8.051 Atomic orbital electron populations 1.86452 1.17198 1.82538 1.51342 1.25027 0.85985 1.11902 0.96878 0.94280 0.77255 0.74610 0.84583 1.19505 0.96894 0.93058 0.95815 1.21030 1.03309 0.99489 0.96197 1.21232 0.97087 0.94040 0.96751 1.21583 1.04037 0.95819 1.00872 1.19192 0.95197 0.83172 0.94804 1.86060 1.74794 1.20016 1.43905 1.22993 1.00051 0.92857 0.85716 1.21127 1.01813 0.92557 0.98193 1.21439 1.05050 0.89672 0.99666 1.20816 0.77545 0.88947 0.80605 1.90720 1.42041 1.76171 1.37500 1.49782 1.55596 1.10905 1.20675 1.23255 0.95762 0.98638 0.84536 1.23303 0.95472 0.95934 1.01425 1.22627 0.96431 0.82003 0.95125 1.23037 0.93883 1.00184 0.98949 1.23055 0.97354 0.97156 0.99268 1.22183 0.80766 0.97566 0.98108 1.92728 1.47696 1.97612 1.83817 1.23148 0.95228 1.01199 0.96002 1.20381 1.03852 0.94214 0.98099 0.74487 0.89102 1.22124 1.21281 0.86063 0.82608 0.82335 0.89570 0.89999 0.92353 0.91903 0.85725 0.86201 0.87849 0.88195 0.87799 0.86464 0.92863 0.85697 0.91768 0.90458 0.87570 0.85727 0.92071 0.85444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 -1.72 12.81 -148.98 -1.91 -3.63 16 2 C -0.09 -0.22 2.79 71.24 0.20 -0.02 16 3 Si 0.79 -0.63 29.85 68.60 2.05 1.42 16 4 C -0.05 -0.43 5.38 -19.88 -0.11 -0.54 16 5 C -0.18 -1.26 8.67 22.28 0.19 -1.07 16 6 C -0.07 -0.26 10.04 22.26 0.22 -0.04 16 7 C -0.20 -0.71 9.04 22.37 0.20 -0.51 16 8 C 0.12 1.01 6.69 22.50 0.15 1.16 16 9 O -0.33 -2.80 10.14 -92.48 -0.94 -3.74 16 10 C 0.06 0.00 4.74 71.98 0.34 0.35 16 11 C -0.10 -0.26 4.87 30.59 0.15 -0.11 16 12 C -0.12 0.35 5.54 29.85 0.17 0.52 16 13 C 0.53 2.69 8.07 87.66 0.71 3.40 16 14 O -0.58 -8.86 15.76 -3.04 -0.05 -8.91 16 15 N -0.64 0.22 3.69 -820.74 -3.03 -2.81 16 16 C 0.10 -0.91 8.42 82.26 0.69 -0.22 16 17 C -0.12 1.18 8.25 30.82 0.25 1.44 16 18 C 0.12 -0.27 1.44 -0.49 0.00 -0.27 16 19 C -0.12 -0.02 7.19 30.93 0.22 0.20 16 20 C -0.15 -0.50 4.11 -10.18 -0.04 -0.55 16 21 C 0.07 0.08 7.33 71.98 0.53 0.61 16 22 F -0.24 -1.95 17.30 44.97 0.78 -1.17 16 23 C -0.12 0.14 7.47 30.93 0.23 0.37 16 24 C -0.15 -1.47 9.62 22.36 0.22 -1.25 16 25 H 0.40 -3.28 8.74 -74.06 -0.65 -3.92 16 26 H 0.09 -0.10 7.96 -2.39 -0.02 -0.12 16 27 H -0.29 -1.80 7.05 99.48 0.70 -1.10 16 28 H -0.29 -1.17 7.11 99.48 0.71 -0.47 16 29 H 0.12 0.67 4.86 -2.91 -0.01 0.66 16 30 H 0.16 -0.39 8.06 -2.91 -0.02 -0.41 16 31 H 0.16 -0.48 6.30 -2.91 -0.02 -0.50 16 32 H 0.09 -0.37 7.67 -2.39 -0.02 -0.39 16 33 H 0.08 -0.28 7.65 -2.39 -0.02 -0.30 16 34 H 0.06 0.44 8.10 -2.39 -0.02 0.42 16 35 H 0.06 0.42 8.10 -2.38 -0.02 0.40 16 36 H 0.12 -1.06 8.14 -2.39 -0.02 -1.07 16 37 H 0.12 -0.90 8.14 -2.38 -0.02 -0.92 16 38 H 0.10 -1.35 8.14 -2.39 -0.02 -1.37 16 39 H 0.10 -1.11 8.14 -2.39 -0.02 -1.13 16 40 H 0.10 -1.02 8.14 -2.39 -0.02 -1.04 16 41 H 0.12 -1.59 8.14 -2.39 -0.02 -1.61 16 42 H 0.05 0.34 7.84 -2.39 -0.02 0.33 16 43 H 0.12 -0.73 8.04 -2.38 -0.02 -0.75 16 44 H 0.06 0.75 7.75 -2.39 -0.02 0.73 16 45 H 0.08 0.03 8.14 -2.38 -0.02 0.01 16 46 H 0.11 -0.53 8.06 -2.38 -0.02 -0.55 16 47 H 0.12 -0.75 8.10 -2.38 -0.02 -0.77 16 48 H 0.06 0.11 8.14 -2.39 -0.02 0.09 16 49 H 0.13 1.30 8.06 -2.91 -0.02 1.27 16 Total: 0.00 -29.44 403.77 1.56 -27.87 By element: Atomic # 1 Polarization: -12.84 SS G_CDS: 0.34 Total: -12.51 kcal Atomic # 6 Polarization: -0.85 SS G_CDS: 4.32 Total: 3.48 kcal Atomic # 7 Polarization: 0.22 SS G_CDS: -3.03 Total: -2.81 kcal Atomic # 8 Polarization: -13.38 SS G_CDS: -2.89 Total: -16.27 kcal Atomic # 9 Polarization: -1.95 SS G_CDS: 0.78 Total: -1.17 kcal Atomic # 14 Polarization: -0.63 SS G_CDS: 2.05 Total: 1.42 kcal Total: -29.44 1.56 -27.87 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_4549616.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -36.876 kcal (2) G-P(sol) polarization free energy of solvation -29.436 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -66.312 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.565 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.871 kcal (6) G-S(sol) free energy of system = (1) + (5) -64.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds