Wall clock time and date at job start Tue Mar 9 2021 13:47:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35897 * 117.00135 * 2 1 4 4 C 1.38614 * 120.02715 * 180.02562 * 3 2 1 5 5 C 1.38661 * 119.88841 * 180.02562 * 4 3 2 6 6 O 1.35895 * 120.02568 * 180.02562 * 5 4 3 7 7 C 1.42910 * 116.99966 * 359.97438 * 6 5 4 8 8 C 1.50698 * 109.47009 * 179.97438 * 7 6 5 9 9 O 1.21285 * 120.00338 * 359.97438 * 8 7 6 10 10 N 1.34771 * 120.00015 * 179.97438 * 8 7 6 11 11 C 1.47222 * 136.18198 * 359.63610 * 10 8 7 12 12 C 1.53879 * 88.10847 * 153.65940 * 11 10 8 13 13 C 1.46285 * 136.18110 * 179.97438 * 10 8 7 14 14 C 1.53079 * 120.98181 * 80.56090 * 13 10 8 15 15 C 1.53926 * 86.84439 * 259.66649 * 14 13 10 16 16 C 1.52990 * 113.65798 * 220.52591 * 15 14 13 17 17 F 1.39900 * 109.47055 * 162.70454 * 16 15 14 18 18 C 1.53075 * 120.98674 * 332.52866 * 13 10 8 19 19 C 1.38747 * 119.94674 * 0.02562 * 5 4 3 20 20 C 1.50693 * 119.97448 * 179.97438 * 19 5 4 21 21 O 1.42907 * 109.47661 * 285.00326 * 20 19 5 22 22 Si 1.86298 * 109.47618 * 165.00016 * 20 19 5 23 23 C 1.38196 * 120.05438 * 0.26998 * 19 5 4 24 24 C 1.38159 * 120.10687 * 359.45493 * 23 19 5 25 25 H 1.09004 * 109.47473 * 59.99697 * 1 2 3 26 26 H 1.08995 * 109.47410 * 179.97438 * 1 2 3 27 27 H 1.09003 * 109.46684 * 299.99548 * 1 2 3 28 28 H 1.07997 * 120.05758 * 0.04532 * 4 3 2 29 29 H 1.09001 * 109.46894 * 299.99040 * 7 6 5 30 30 H 1.08992 * 109.46848 * 59.99466 * 7 6 5 31 31 H 1.09005 * 113.42794 * 268.44779 * 11 10 8 32 32 H 1.09003 * 113.43162 * 38.76928 * 11 10 8 33 33 H 1.09003 * 114.46378 * 272.02143 * 12 11 10 34 34 H 1.08999 * 114.18719 * 139.08001 * 12 11 10 35 35 H 1.08996 * 113.65126 * 14.15253 * 14 13 10 36 36 H 1.09001 * 113.65294 * 145.17886 * 14 13 10 37 37 H 1.08998 * 113.58595 * 89.71895 * 15 14 13 38 38 H 1.08998 * 109.47373 * 282.70128 * 16 15 14 39 39 H 1.09000 * 109.47430 * 42.71024 * 16 15 14 40 40 H 1.08999 * 113.64810 * 214.82032 * 18 13 10 41 41 H 1.08999 * 113.64945 * 345.74573 * 18 13 10 42 42 H 1.09000 * 109.46936 * 44.99949 * 20 19 5 43 43 H 0.96697 * 114.00527 * 179.97438 * 21 20 19 44 44 H 1.48506 * 109.99834 * 298.68714 * 22 20 19 45 45 H 1.48502 * 110.00011 * 59.99978 * 22 20 19 46 46 H 1.08005 * 119.94801 * 179.72594 * 23 19 5 47 47 H 1.08002 * 119.96881 * 180.25640 * 24 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4302 1.2840 -0.0005 5 6 4.0567 2.5210 0.0000 6 8 5.4136 2.5960 -0.0010 7 6 6.1316 1.3604 -0.0021 8 6 7.6124 1.6400 -0.0038 9 8 8.0135 2.7846 -0.0046 10 7 8.4912 0.6181 -0.0045 11 6 8.4109 -0.8519 0.0024 12 6 9.7858 -0.8793 -0.6880 13 6 9.9473 0.4782 -0.0065 14 6 10.7541 0.6178 1.2868 15 6 11.0846 2.0488 0.8260 16 6 12.5325 2.4620 1.0969 17 9 12.8520 3.5795 0.3183 18 6 10.8423 1.5615 -0.6138 19 6 3.2972 3.6821 0.0016 20 6 3.9774 5.0268 0.0028 21 8 4.5043 5.2930 1.3042 22 14 2.7438 6.3474 -0.4498 23 6 1.9173 3.6065 0.0083 24 6 1.2907 2.3752 0.0021 25 1 -0.3634 0.5139 -0.8900 26 1 -0.3634 -1.0276 -0.0005 27 1 -0.3633 0.5138 0.8901 28 1 4.0197 0.3791 -0.0017 29 1 5.8707 0.7878 0.8879 30 1 5.8691 0.7885 -0.8920 31 1 8.4203 -1.2817 1.0041 32 1 7.6050 -1.2449 -0.6174 33 1 9.7455 -0.8323 -1.7763 34 1 10.4581 -1.6515 -0.3140 35 1 10.1440 0.5790 2.1892 36 1 11.6233 -0.0384 1.3331 37 1 10.3625 2.7929 1.1619 38 1 12.6484 2.7093 2.1521 39 1 13.1993 1.6386 0.8413 40 1 11.7360 1.1690 -1.0989 41 1 10.3029 2.2771 -1.2343 42 1 4.7895 5.0237 -0.7243 43 1 4.9575 6.1440 1.3786 44 1 2.2120 6.0996 -1.8141 45 1 1.6314 6.3618 0.5339 46 1 1.3277 4.5114 0.0140 47 1 0.2121 2.3187 0.0031 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:00 Heat of formation + Delta-G solvation = -82.233805 kcal Electronic energy + Delta-G solvation = -31702.941654 eV Core-core repulsion = 27156.601178 eV Total energy + Delta-G solvation = -4546.340475 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.156 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -48.58854 -42.35486 -41.83800 -40.40162 -39.35832 -38.20787 -37.09646 -37.05500 -32.57262 -32.04214 -31.20095 -29.11835 -28.97293 -28.44415 -26.88720 -26.16487 -24.54093 -24.14542 -22.66173 -22.45668 -21.38601 -20.08227 -19.11207 -18.45787 -18.32529 -17.88043 -17.64877 -17.45151 -17.17284 -16.96376 -16.92232 -16.79244 -16.75486 -16.34480 -16.15887 -15.71177 -15.53033 -15.30280 -15.01718 -14.80857 -14.33686 -14.15728 -13.93708 -13.86344 -13.59640 -13.48965 -13.43154 -13.33087 -13.27176 -12.71505 -12.63046 -12.51788 -12.49754 -12.10587 -12.03897 -11.97070 -11.79992 -11.77486 -11.53647 -10.95613 -10.87401 -10.27266 -9.89695 -9.83554 -9.28507 -4.97576 -0.01935 0.11115 1.11040 1.26244 1.32910 1.60249 1.87591 2.05520 2.27721 2.35786 3.10411 3.29611 3.36085 3.41360 3.43153 3.51119 3.57201 3.64720 3.74902 3.81056 3.88818 3.91736 4.04307 4.07291 4.11064 4.13323 4.16796 4.19856 4.28223 4.30157 4.30377 4.40804 4.47085 4.59396 4.63941 4.67026 4.67672 4.74341 4.82520 4.86987 4.95986 4.99530 5.01671 5.02277 5.08834 5.24800 5.28132 5.36029 5.98464 6.19709 6.54655 6.84696 6.91296 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.015 3.985 2 O -0.324 6.324 3 C 0.168 3.832 4 C -0.247 4.247 5 C 0.178 3.822 6 O -0.299 6.299 7 C 0.045 3.955 8 C 0.536 3.464 9 O -0.562 6.562 10 N -0.631 5.631 11 C 0.095 3.905 12 C -0.121 4.121 13 C 0.129 3.871 14 C -0.106 4.106 15 C -0.150 4.150 16 C 0.067 3.933 17 F -0.241 7.241 18 C -0.134 4.134 19 C -0.167 4.167 20 C -0.077 4.077 21 O -0.564 6.564 22 Si 0.781 3.219 23 C -0.056 4.056 24 C -0.239 4.239 25 H 0.067 0.933 26 H 0.123 0.877 27 H 0.066 0.934 28 H 0.159 0.841 29 H 0.115 0.885 30 H 0.118 0.882 31 H 0.110 0.890 32 H 0.101 0.899 33 H 0.100 0.900 34 H 0.127 0.873 35 H 0.074 0.926 36 H 0.139 0.861 37 H 0.063 0.937 38 H 0.085 0.915 39 H 0.107 0.893 40 H 0.118 0.882 41 H 0.041 0.959 42 H 0.062 0.938 43 H 0.396 0.604 44 H -0.283 1.283 45 H -0.276 1.276 46 H 0.137 0.863 47 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.302 -8.311 0.122 8.317 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 O -0.237 6.237 3 C 0.122 3.878 4 C -0.266 4.266 5 C 0.132 3.868 6 O -0.211 6.211 7 C -0.033 4.033 8 C 0.325 3.675 9 O -0.440 6.440 10 N -0.367 5.367 11 C -0.026 4.026 12 C -0.159 4.159 13 C 0.044 3.956 14 C -0.145 4.145 15 C -0.169 4.169 16 C 0.013 3.987 17 F -0.223 7.223 18 C -0.172 4.172 19 C -0.168 4.168 20 C -0.185 4.185 21 O -0.373 6.373 22 Si 0.684 3.316 23 C -0.073 4.073 24 C -0.257 4.257 25 H 0.086 0.914 26 H 0.141 0.859 27 H 0.085 0.915 28 H 0.177 0.823 29 H 0.132 0.868 30 H 0.135 0.865 31 H 0.128 0.872 32 H 0.119 0.881 33 H 0.118 0.882 34 H 0.145 0.855 35 H 0.093 0.907 36 H 0.157 0.843 37 H 0.082 0.918 38 H 0.103 0.897 39 H 0.125 0.875 40 H 0.136 0.864 41 H 0.060 0.940 42 H 0.080 0.920 43 H 0.246 0.754 44 H -0.210 1.210 45 H -0.203 1.203 46 H 0.154 0.846 47 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -1.129 -7.941 0.000 8.021 hybrid contribution -0.270 0.058 0.025 0.277 sum -1.399 -7.883 0.024 8.006 Atomic orbital electron populations 1.23436 0.75887 1.06027 1.02545 1.86058 1.23832 1.25957 1.87819 1.18780 0.91627 0.84872 0.92551 1.20590 0.93361 0.97427 1.15266 1.18529 0.81931 0.93025 0.93342 1.86193 1.15157 1.31736 1.88014 1.22602 0.88494 0.86194 1.06034 1.19956 0.87490 0.83950 0.76114 1.90755 1.80345 1.22405 1.50504 1.49587 1.07026 1.08114 1.72007 1.23453 0.99667 0.76485 1.02977 1.23303 0.97042 0.94464 1.01059 1.22639 0.79769 0.95350 0.97812 1.23139 1.00742 0.94479 0.96092 1.23081 0.96760 0.98623 0.98465 1.22237 0.95526 0.85832 0.95141 1.92728 1.94149 1.57081 1.78308 1.23104 1.00353 0.97735 0.95967 1.18946 0.92949 0.93305 1.11600 1.24849 1.04959 1.00150 0.88550 1.86444 1.77454 1.44188 1.29242 0.94055 0.76397 0.84846 0.76305 1.20773 0.92480 0.98365 0.95703 1.21355 1.01677 0.91161 1.11530 0.91419 0.85884 0.91538 0.82310 0.86759 0.86460 0.87167 0.88112 0.88183 0.85504 0.90741 0.84302 0.91846 0.89699 0.87479 0.86416 0.94043 0.91997 0.75431 1.20978 1.20280 0.84597 0.82476 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.32 -1.12 10.49 -92.39 -0.97 -2.09 16 3 C 0.17 1.02 6.68 22.49 0.15 1.17 16 4 C -0.25 -1.59 8.97 22.46 0.20 -1.38 16 5 C 0.18 1.91 6.66 22.49 0.15 2.06 16 6 O -0.30 -3.67 8.99 -73.33 -0.66 -4.33 16 7 C 0.04 0.17 5.06 71.24 0.36 0.53 16 8 C 0.54 4.66 8.14 87.66 0.71 5.37 16 9 O -0.56 -10.80 16.28 15.99 0.26 -10.54 16 10 N -0.63 -0.53 3.69 -820.68 -3.03 -3.56 16 11 C 0.09 -0.86 8.44 82.35 0.69 -0.16 16 12 C -0.12 1.18 8.24 30.81 0.25 1.44 16 13 C 0.13 -0.29 1.43 -0.58 0.00 -0.29 16 14 C -0.11 0.48 7.52 30.93 0.23 0.71 16 15 C -0.15 -0.47 4.11 -10.18 -0.04 -0.51 16 16 C 0.07 0.04 7.33 71.98 0.53 0.57 16 17 F -0.24 -2.35 17.30 44.97 0.78 -1.57 16 18 C -0.13 -0.37 7.13 30.93 0.22 -0.15 16 19 C -0.17 -1.88 5.30 -19.75 -0.10 -1.98 16 20 C -0.08 -0.66 2.36 71.23 0.17 -0.49 16 21 O -0.56 -5.50 12.86 -148.98 -1.92 -7.41 16 22 Si 0.78 1.95 30.21 68.60 2.07 4.02 16 23 C -0.06 -0.46 8.65 22.24 0.19 -0.27 16 24 C -0.24 -1.26 9.04 22.38 0.20 -1.06 16 25 H 0.07 -0.37 7.66 -2.39 -0.02 -0.38 16 26 H 0.12 -0.96 8.14 -2.39 -0.02 -0.98 16 27 H 0.07 -0.34 7.66 -2.39 -0.02 -0.36 16 28 H 0.16 0.15 6.30 -2.91 -0.02 0.13 16 29 H 0.11 -0.10 7.66 -2.39 -0.02 -0.12 16 30 H 0.12 -0.20 7.66 -2.39 -0.02 -0.22 16 31 H 0.11 -1.36 8.14 -2.38 -0.02 -1.38 16 32 H 0.10 -1.23 8.14 -2.39 -0.02 -1.25 16 33 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 34 H 0.13 -1.91 8.14 -2.39 -0.02 -1.93 16 35 H 0.07 -0.23 8.14 -2.39 -0.02 -0.25 16 36 H 0.14 -1.58 8.04 -2.39 -0.02 -1.60 16 37 H 0.06 0.74 7.73 -2.39 -0.02 0.73 16 38 H 0.08 -0.15 8.14 -2.39 -0.02 -0.17 16 39 H 0.11 -0.63 8.06 -2.39 -0.02 -0.65 16 40 H 0.12 -0.24 8.10 -2.39 -0.02 -0.26 16 41 H 0.04 0.46 7.86 -2.39 -0.02 0.44 16 42 H 0.06 0.60 7.82 -2.39 -0.02 0.58 16 43 H 0.40 -0.02 8.74 -74.06 -0.65 -0.67 16 44 H -0.28 -1.96 7.11 99.48 0.71 -1.26 16 45 H -0.28 -1.78 6.74 99.48 0.67 -1.11 16 46 H 0.14 0.84 4.89 -2.91 -0.01 0.83 16 47 H 0.16 -0.06 6.29 -2.91 -0.02 -0.07 16 Total: 0.00 -31.67 390.01 1.93 -29.74 By element: Atomic # 1 Polarization: -11.22 SS G_CDS: 0.36 Total: -10.86 kcal Atomic # 6 Polarization: 1.57 SS G_CDS: 5.03 Total: 6.61 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -3.03 Total: -3.56 kcal Atomic # 8 Polarization: -21.09 SS G_CDS: -3.28 Total: -24.38 kcal Atomic # 9 Polarization: -2.35 SS G_CDS: 0.78 Total: -1.57 kcal Atomic # 14 Polarization: 1.95 SS G_CDS: 2.07 Total: 4.02 kcal Total: -31.67 1.93 -29.74 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -52.491 kcal (2) G-P(sol) polarization free energy of solvation -31.669 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.927 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.742 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.234 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds