Wall clock time and date at job start Tue Mar 9 2021 13:47:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35968 * 116.99420 * 2 1 4 4 C 1.39447 * 120.11443 * 179.97438 * 3 2 1 5 5 O 1.34775 * 133.25058 * 0.06552 * 4 3 2 6 6 C 1.34920 * 110.84657 * 179.97438 * 5 4 3 7 7 C 1.46996 * 125.14066 * 180.02562 * 6 5 4 8 8 O 1.21646 * 120.00266 * 180.02562 * 7 6 5 9 9 N 1.34784 * 119.99767 * 0.02562 * 7 6 5 10 10 C 1.47212 * 136.18053 * 359.63082 * 9 7 6 11 11 C 1.53884 * 88.10957 * 153.66138 * 10 9 7 12 12 C 1.46280 * 136.17828 * 180.02562 * 9 7 6 13 13 C 1.53068 * 120.98656 * 80.55361 * 12 9 7 14 14 C 1.53915 * 86.84665 * 259.66838 * 13 12 9 15 15 C 1.53001 * 113.66089 * 220.52438 * 14 13 12 16 16 F 1.39900 * 109.47072 * 277.70578 * 15 14 13 17 17 C 1.53077 * 120.98524 * 332.51974 * 12 9 7 18 18 C 1.35808 * 109.72311 * 0.26194 * 6 5 4 19 19 C 1.40613 * 119.13585 * 180.02562 * 4 3 2 20 20 C 1.39783 * 120.11730 * 0.02686 * 19 4 3 21 21 C 1.50696 * 120.09518 * 179.97438 * 20 19 4 22 22 O 1.42907 * 109.46827 * 285.00303 * 21 20 19 23 23 Si 1.86294 * 109.47512 * 164.99886 * 21 20 19 24 24 C 1.36629 * 119.81418 * 359.97386 * 20 19 4 25 25 C 1.38255 * 120.12541 * 0.02562 * 3 2 1 26 26 H 1.09000 * 109.47007 * 60.00539 * 1 2 3 27 27 H 1.09001 * 109.46853 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47564 * 300.00540 * 1 2 3 29 29 H 1.08997 * 113.43577 * 268.45069 * 10 9 7 30 30 H 1.09006 * 113.43633 * 38.78356 * 10 9 7 31 31 H 1.08995 * 114.46713 * 272.03609 * 11 10 9 32 32 H 1.08996 * 114.18915 * 139.07020 * 11 10 9 33 33 H 1.09004 * 113.65110 * 14.15318 * 13 12 9 34 34 H 1.08994 * 113.65591 * 145.18029 * 13 12 9 35 35 H 1.09002 * 113.58690 * 89.71793 * 14 13 12 36 36 H 1.08997 * 109.47099 * 37.70375 * 15 14 13 37 37 H 1.08993 * 109.47145 * 157.70483 * 15 14 13 38 38 H 1.09004 * 113.65197 * 214.82180 * 17 12 9 39 39 H 1.08995 * 113.65054 * 345.84155 * 17 12 9 40 40 H 1.07999 * 126.96100 * 179.70422 * 18 6 5 41 41 H 1.08998 * 109.47130 * 44.99261 * 21 20 19 42 42 H 0.96702 * 114.00082 * 180.02562 * 22 21 20 43 43 H 1.48497 * 110.00106 * 298.68423 * 23 21 20 44 44 H 1.48500 * 109.99842 * 59.99795 * 23 21 20 45 45 H 1.07996 * 119.75345 * 179.97438 * 24 20 19 46 46 H 1.08007 * 119.65940 * 359.97438 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3575 0.0000 6 6 5.6316 0.9389 0.0004 7 6 6.9131 0.2187 -0.0006 8 8 7.9595 0.8391 0.0004 9 7 6.9287 -1.1290 -0.0025 10 6 5.9218 -2.2029 0.0025 11 6 6.9576 -3.1078 -0.6877 12 6 7.9537 -2.1727 -0.0034 13 6 8.6589 -2.5858 1.2908 14 6 9.8331 -1.7023 0.8329 15 6 11.2072 -2.3173 1.1059 16 9 11.5728 -2.0712 2.4336 17 6 9.3368 -1.9182 -0.6079 18 6 5.4944 2.2900 0.0071 19 6 4.0553 2.5511 0.0011 20 6 3.2764 3.7118 0.0016 21 6 3.9379 5.0658 0.0028 22 8 4.4599 5.3397 1.3046 23 14 2.6863 6.3689 -0.4513 24 6 1.9135 3.6152 0.0011 25 6 1.2956 2.3726 0.0005 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 5.6514 -2.5390 1.0035 30 1 5.0525 -1.9851 -0.6181 31 1 6.9582 -3.0447 -1.7758 32 1 6.9754 -4.1317 -0.3144 33 1 8.1650 -2.2239 2.1926 34 1 8.9023 -3.6472 1.3366 35 1 9.7581 -0.6683 1.1697 36 1 11.1645 -3.3928 0.9341 37 1 11.9439 -1.8716 0.4376 38 1 9.7697 -2.7931 -1.0931 39 1 9.3856 -1.0220 -1.2262 40 1 6.2873 3.0232 0.0134 41 1 4.7506 5.0737 -0.7235 42 1 4.9005 6.1973 1.3793 43 1 2.1592 6.1132 -1.8159 44 1 1.5731 6.3682 0.5315 45 1 1.3126 4.5126 0.0020 46 1 0.2172 2.3119 0.0005 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17321334_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:19 Heat of formation + Delta-G solvation = -39.926850 kcal Electronic energy + Delta-G solvation = -32918.539033 eV Core-core repulsion = 28273.118463 eV Total energy + Delta-G solvation = -4645.420570 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -48.41204 -43.66426 -42.27156 -40.70353 -39.32585 -38.96824 -37.14322 -37.04566 -33.57140 -32.16264 -31.56668 -30.49446 -29.07453 -28.65401 -27.01163 -26.30892 -25.17106 -24.59331 -23.95089 -22.55344 -21.65937 -21.43318 -20.08548 -19.01413 -18.54012 -18.43977 -18.27717 -17.66573 -17.20338 -17.11411 -16.98678 -16.90395 -16.61687 -16.37911 -16.33151 -16.16426 -15.47154 -15.30619 -15.05593 -14.77037 -14.53694 -14.28546 -14.22951 -14.00507 -13.97019 -13.78709 -13.56467 -13.50721 -13.40542 -13.16357 -12.79262 -12.66620 -12.62685 -12.43884 -12.09679 -12.01746 -11.90021 -11.76800 -11.52498 -11.23100 -10.95149 -10.93420 -10.33794 -9.93497 -9.71691 -8.99329 -5.02726 -0.58694 0.10378 0.70771 1.19126 1.23867 1.59010 1.63701 1.89778 2.01408 2.05835 2.37112 2.96920 3.17821 3.31112 3.32798 3.35022 3.52748 3.53394 3.56261 3.67619 3.80829 3.84769 3.98539 4.03934 4.05770 4.07139 4.07569 4.12527 4.14789 4.18610 4.23929 4.32347 4.43384 4.44357 4.49242 4.55301 4.63600 4.65322 4.71244 4.76733 4.83501 4.85625 4.91508 5.04654 5.06082 5.11324 5.23524 5.30059 5.37877 5.66965 6.17294 6.47067 6.61183 6.90918 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.309 6.309 3 C 0.152 3.848 4 C 0.046 3.954 5 O -0.169 6.169 6 C -0.016 4.016 7 C 0.628 3.372 8 O -0.505 6.505 9 N -0.617 5.617 10 C 0.103 3.897 11 C -0.138 4.138 12 C 0.140 3.860 13 C -0.128 4.128 14 C -0.142 4.142 15 C 0.073 3.927 16 F -0.218 7.218 17 C -0.129 4.129 18 C -0.104 4.104 19 C -0.081 4.081 20 C -0.052 4.052 21 C -0.071 4.071 22 O -0.543 6.543 23 Si 0.686 3.314 24 C -0.097 4.097 25 C -0.178 4.178 26 H 0.060 0.940 27 H 0.107 0.893 28 H 0.060 0.940 29 H 0.091 0.909 30 H 0.088 0.912 31 H 0.101 0.899 32 H 0.098 0.902 33 H 0.077 0.923 34 H 0.104 0.896 35 H 0.107 0.893 36 H 0.076 0.924 37 H 0.076 0.924 38 H 0.101 0.899 39 H 0.084 0.916 40 H 0.175 0.825 41 H 0.075 0.925 42 H 0.383 0.617 43 H -0.253 1.253 44 H -0.249 1.249 45 H 0.133 0.867 46 H 0.148 0.852 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.551 -0.878 -2.987 4.722 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.223 6.223 3 C 0.106 3.894 4 C -0.003 4.003 5 O -0.071 6.071 6 C -0.066 4.066 7 C 0.417 3.583 8 O -0.382 6.382 9 N -0.350 5.350 10 C -0.019 4.019 11 C -0.175 4.175 12 C 0.055 3.945 13 C -0.166 4.166 14 C -0.161 4.161 15 C 0.018 3.982 16 F -0.199 7.199 17 C -0.167 4.167 18 C -0.125 4.125 19 C -0.082 4.082 20 C -0.052 4.052 21 C -0.181 4.181 22 O -0.349 6.349 23 Si 0.587 3.413 24 C -0.114 4.114 25 C -0.196 4.196 26 H 0.079 0.921 27 H 0.125 0.875 28 H 0.079 0.921 29 H 0.109 0.891 30 H 0.106 0.894 31 H 0.120 0.880 32 H 0.116 0.884 33 H 0.096 0.904 34 H 0.122 0.878 35 H 0.126 0.874 36 H 0.094 0.906 37 H 0.095 0.905 38 H 0.119 0.881 39 H 0.103 0.897 40 H 0.192 0.808 41 H 0.093 0.907 42 H 0.230 0.770 43 H -0.177 1.177 44 H -0.173 1.173 45 H 0.151 0.849 46 H 0.165 0.835 Dipole moment (debyes) X Y Z Total from point charges -4.045 -1.217 -3.069 5.221 hybrid contribution -0.224 -0.184 0.182 0.342 sum -4.268 -1.401 -2.888 5.341 Atomic orbital electron populations 1.23193 0.77322 1.04785 1.01779 1.86168 1.22151 1.25543 1.88396 1.17681 0.86484 0.85798 0.99483 1.18765 0.87504 0.86991 1.07009 1.84103 1.12581 1.34435 1.75945 1.21866 0.83757 0.92300 1.08670 1.16099 0.85530 0.79776 0.76866 1.90906 1.30457 1.66240 1.50573 1.49308 1.11428 1.02621 1.71679 1.23129 0.93428 0.83736 1.01637 1.23315 0.94658 0.98354 1.01217 1.22378 0.89978 0.84658 0.97522 1.23260 0.95824 1.00742 0.96769 1.23190 0.93739 1.01550 0.97593 1.21992 0.96117 1.01175 0.78945 1.92780 1.93024 1.96066 1.37996 1.23064 0.93905 1.03469 0.96220 1.22684 0.94617 0.94199 1.00955 1.19387 0.92729 0.91986 1.04120 1.18440 0.92236 0.92335 1.02193 1.24669 1.05118 0.99267 0.89071 1.86526 1.77929 1.41933 1.28505 0.95132 0.79509 0.86704 0.79931 1.20412 0.93485 0.97450 1.00091 1.20921 1.00372 0.90437 1.07914 0.92145 0.87517 0.92122 0.89079 0.89376 0.88028 0.88360 0.90384 0.87763 0.87444 0.90581 0.90547 0.88060 0.89722 0.80807 0.90734 0.76965 1.17750 1.17350 0.84930 0.83459 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.31 -0.73 10.50 -19.64 -0.21 -0.94 16 3 C 0.15 0.49 6.70 -39.13 -0.26 0.23 16 4 C 0.05 0.22 7.35 -38.24 -0.28 -0.07 16 5 O -0.17 -0.78 9.13 2.68 0.02 -0.76 16 6 C -0.02 -0.07 7.04 -36.91 -0.26 -0.33 16 7 C 0.63 2.91 8.04 -12.71 -0.10 2.81 16 8 O -0.51 -3.42 16.60 5.24 0.09 -3.33 16 9 N -0.62 -1.28 3.69 -174.76 -0.64 -1.92 16 10 C 0.10 -0.06 7.79 -9.66 -0.08 -0.13 16 11 C -0.14 0.33 8.24 -26.37 -0.22 0.11 16 12 C 0.14 -0.02 1.43 -138.44 -0.20 -0.22 16 13 C -0.13 0.05 7.51 -26.22 -0.20 -0.14 16 14 C -0.14 -0.12 4.09 -89.67 -0.37 -0.49 16 15 C 0.07 0.01 7.35 37.16 0.27 0.28 16 16 F -0.22 -0.82 17.36 2.25 0.04 -0.78 16 17 C -0.13 0.03 7.19 -26.22 -0.19 -0.16 16 18 C -0.10 -0.43 10.68 -37.23 -0.40 -0.83 16 19 C -0.08 -0.36 6.16 -105.20 -0.65 -1.01 16 20 C -0.05 -0.17 5.30 -104.63 -0.55 -0.72 16 21 C -0.07 -0.05 2.70 36.00 0.10 0.05 16 22 O -0.54 -0.51 12.86 -35.23 -0.45 -0.96 16 23 Si 0.69 -0.78 30.20 -169.99 -5.13 -5.91 16 24 C -0.10 -0.23 8.62 -39.97 -0.34 -0.58 16 25 C -0.18 -0.29 9.03 -39.38 -0.36 -0.65 16 26 H 0.06 -0.18 7.66 -51.93 -0.40 -0.57 16 27 H 0.11 -0.37 8.14 -51.93 -0.42 -0.79 16 28 H 0.06 -0.17 7.66 -51.93 -0.40 -0.56 16 29 H 0.09 -0.13 8.14 -51.93 -0.42 -0.55 16 30 H 0.09 -0.02 7.50 -51.93 -0.39 -0.41 16 31 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 32 H 0.10 -0.42 8.14 -51.93 -0.42 -0.84 16 33 H 0.08 0.07 8.14 -51.93 -0.42 -0.36 16 34 H 0.10 -0.26 7.97 -51.93 -0.41 -0.67 16 35 H 0.11 0.40 7.73 -51.93 -0.40 0.00 16 36 H 0.08 -0.16 7.95 -51.93 -0.41 -0.57 16 37 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 38 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 39 H 0.08 0.15 7.85 -51.93 -0.41 -0.26 16 40 H 0.17 0.49 8.06 -52.49 -0.42 0.07 16 41 H 0.07 -0.05 7.96 -51.93 -0.41 -0.47 16 42 H 0.38 -1.61 8.74 45.56 0.40 -1.21 16 43 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 44 H -0.25 -0.33 6.75 56.52 0.38 0.05 16 45 H 0.13 0.15 4.85 -52.49 -0.25 -0.10 16 46 H 0.15 -0.20 6.26 -52.48 -0.33 -0.52 16 LS Contribution 386.34 15.07 5.82 5.82 Total: 0.00 -9.65 386.34 -9.57 -19.21 By element: Atomic # 1 Polarization: -3.53 SS G_CDS: -6.02 Total: -9.55 kcal Atomic # 6 Polarization: 2.20 SS G_CDS: -3.09 Total: -0.89 kcal Atomic # 7 Polarization: -1.28 SS G_CDS: -0.64 Total: -1.92 kcal Atomic # 8 Polarization: -5.44 SS G_CDS: -0.55 Total: -5.99 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.04 Total: -0.78 kcal Atomic # 14 Polarization: -0.78 SS G_CDS: -5.13 Total: -5.91 kcal Total LS contribution 5.82 Total: 5.82 kcal Total: -9.65 -9.57 -19.21 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.712 kcal (2) G-P(sol) polarization free energy of solvation -9.646 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -30.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.568 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.214 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.927 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds