Wall clock time and date at job start Tue Mar 9 2021 13:47:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35968 * 116.99420 * 2 1 4 4 C 1.39447 * 120.11443 * 179.97438 * 3 2 1 5 5 O 1.34775 * 133.25058 * 0.06552 * 4 3 2 6 6 C 1.34920 * 110.84657 * 179.97438 * 5 4 3 7 7 C 1.46996 * 125.14066 * 180.02562 * 6 5 4 8 8 O 1.21646 * 120.00266 * 180.02562 * 7 6 5 9 9 N 1.34784 * 119.99767 * 0.02562 * 7 6 5 10 10 C 1.47212 * 136.18053 * 359.63082 * 9 7 6 11 11 C 1.53884 * 88.10957 * 153.66138 * 10 9 7 12 12 C 1.46280 * 136.17828 * 180.02562 * 9 7 6 13 13 C 1.53068 * 120.98656 * 80.55361 * 12 9 7 14 14 C 1.53915 * 86.84665 * 259.66838 * 13 12 9 15 15 C 1.53001 * 113.66089 * 220.52438 * 14 13 12 16 16 F 1.39900 * 109.47072 * 277.70578 * 15 14 13 17 17 C 1.53077 * 120.98524 * 332.51974 * 12 9 7 18 18 C 1.35808 * 109.72311 * 0.26194 * 6 5 4 19 19 C 1.40613 * 119.13585 * 180.02562 * 4 3 2 20 20 C 1.39783 * 120.11730 * 0.02686 * 19 4 3 21 21 C 1.50696 * 120.09518 * 179.97438 * 20 19 4 22 22 O 1.42907 * 109.46827 * 285.00303 * 21 20 19 23 23 Si 1.86294 * 109.47512 * 164.99886 * 21 20 19 24 24 C 1.36629 * 119.81418 * 359.97386 * 20 19 4 25 25 C 1.38255 * 120.12541 * 0.02562 * 3 2 1 26 26 H 1.09000 * 109.47007 * 60.00539 * 1 2 3 27 27 H 1.09001 * 109.46853 * 180.02562 * 1 2 3 28 28 H 1.08995 * 109.47564 * 300.00540 * 1 2 3 29 29 H 1.08997 * 113.43577 * 268.45069 * 10 9 7 30 30 H 1.09006 * 113.43633 * 38.78356 * 10 9 7 31 31 H 1.08995 * 114.46713 * 272.03609 * 11 10 9 32 32 H 1.08996 * 114.18915 * 139.07020 * 11 10 9 33 33 H 1.09004 * 113.65110 * 14.15318 * 13 12 9 34 34 H 1.08994 * 113.65591 * 145.18029 * 13 12 9 35 35 H 1.09002 * 113.58690 * 89.71793 * 14 13 12 36 36 H 1.08997 * 109.47099 * 37.70375 * 15 14 13 37 37 H 1.08993 * 109.47145 * 157.70483 * 15 14 13 38 38 H 1.09004 * 113.65197 * 214.82180 * 17 12 9 39 39 H 1.08995 * 113.65054 * 345.84155 * 17 12 9 40 40 H 1.07999 * 126.96100 * 179.70422 * 18 6 5 41 41 H 1.08998 * 109.47130 * 44.99261 * 21 20 19 42 42 H 0.96702 * 114.00082 * 180.02562 * 22 21 20 43 43 H 1.48497 * 110.00106 * 298.68423 * 23 21 20 44 44 H 1.48500 * 109.99842 * 59.99795 * 23 21 20 45 45 H 1.07996 * 119.75345 * 179.97438 * 24 20 19 46 46 H 1.08007 * 119.65940 * 359.97438 * 25 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4386 1.2874 0.0005 5 8 4.4141 0.3575 0.0000 6 6 5.6316 0.9389 0.0004 7 6 6.9131 0.2187 -0.0006 8 8 7.9595 0.8391 0.0004 9 7 6.9287 -1.1290 -0.0025 10 6 5.9218 -2.2029 0.0025 11 6 6.9576 -3.1078 -0.6877 12 6 7.9537 -2.1727 -0.0034 13 6 8.6589 -2.5858 1.2908 14 6 9.8331 -1.7023 0.8329 15 6 11.2072 -2.3173 1.1059 16 9 11.5728 -2.0712 2.4336 17 6 9.3368 -1.9182 -0.6079 18 6 5.4944 2.2900 0.0071 19 6 4.0553 2.5511 0.0011 20 6 3.2764 3.7118 0.0016 21 6 3.9379 5.0658 0.0028 22 8 4.4599 5.3397 1.3046 23 14 2.6863 6.3689 -0.4513 24 6 1.9135 3.6152 0.0011 25 6 1.2956 2.3726 0.0005 26 1 -0.3633 0.5137 -0.8900 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3634 0.5139 0.8899 29 1 5.6514 -2.5390 1.0035 30 1 5.0525 -1.9851 -0.6181 31 1 6.9582 -3.0447 -1.7758 32 1 6.9754 -4.1317 -0.3144 33 1 8.1650 -2.2239 2.1926 34 1 8.9023 -3.6472 1.3366 35 1 9.7581 -0.6683 1.1697 36 1 11.1645 -3.3928 0.9341 37 1 11.9439 -1.8716 0.4376 38 1 9.7697 -2.7931 -1.0931 39 1 9.3856 -1.0220 -1.2262 40 1 6.2873 3.0232 0.0134 41 1 4.7506 5.0737 -0.7235 42 1 4.9005 6.1973 1.3793 43 1 2.1592 6.1132 -1.8159 44 1 1.5731 6.3682 0.5315 45 1 1.3126 4.5126 0.0020 46 1 0.2172 2.3119 0.0005 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321334_6672420.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:18 Heat of formation + Delta-G solvation = -39.435525 kcal Electronic energy + Delta-G solvation = -32918.517728 eV Core-core repulsion = 28273.118463 eV Total energy + Delta-G solvation = -4645.399264 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.141 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -48.58195 -43.91560 -42.33154 -40.82563 -39.59834 -39.08067 -37.20653 -37.10349 -33.81530 -32.33683 -31.72676 -30.61679 -29.07839 -28.60968 -26.99071 -26.38260 -25.34087 -24.58595 -24.15981 -22.65429 -21.85013 -21.50294 -20.23982 -19.17987 -18.67068 -18.48123 -18.41174 -17.89671 -17.28192 -17.27039 -17.05882 -17.03358 -16.69898 -16.43017 -16.41827 -16.25465 -15.49845 -15.46256 -15.22028 -14.89564 -14.72101 -14.39354 -14.35328 -14.19229 -14.03808 -13.83349 -13.56658 -13.49455 -13.43323 -13.24991 -12.85411 -12.62879 -12.55738 -12.46871 -12.17064 -12.07693 -11.95716 -11.81354 -11.56522 -11.45636 -11.17168 -10.95152 -10.33931 -10.14996 -9.89198 -9.17652 -4.94778 -0.83328 -0.11929 0.44936 0.98232 1.25328 1.48675 1.64825 1.76213 1.91885 1.96851 2.18320 2.83210 3.17310 3.26278 3.31753 3.34735 3.38168 3.54029 3.56539 3.58875 3.63069 3.74006 3.91357 3.98497 4.03311 4.09809 4.13828 4.15099 4.22354 4.27852 4.28595 4.29413 4.29896 4.51978 4.57500 4.63950 4.66847 4.67153 4.68116 4.72448 4.77796 4.84838 4.89180 4.93245 5.03185 5.04326 5.14823 5.19699 5.32791 5.46615 6.07558 6.28845 6.64982 6.85602 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.327 6.327 3 C 0.142 3.858 4 C 0.022 3.978 5 O -0.174 6.174 6 C -0.027 4.027 7 C 0.620 3.380 8 O -0.541 6.541 9 N -0.622 5.622 10 C 0.096 3.904 11 C -0.114 4.114 12 C 0.129 3.871 13 C -0.119 4.119 14 C -0.149 4.149 15 C 0.069 3.931 16 F -0.241 7.241 17 C -0.120 4.120 18 C -0.110 4.110 19 C -0.097 4.097 20 C -0.070 4.070 21 C -0.089 4.089 22 O -0.564 6.564 23 Si 0.786 3.214 24 C -0.105 4.105 25 C -0.169 4.169 26 H 0.073 0.927 27 H 0.123 0.877 28 H 0.071 0.929 29 H 0.100 0.900 30 H 0.082 0.918 31 H 0.107 0.893 32 H 0.130 0.870 33 H 0.060 0.940 34 H 0.137 0.863 35 H 0.066 0.934 36 H 0.109 0.891 37 H 0.084 0.916 38 H 0.135 0.865 39 H 0.058 0.942 40 H 0.178 0.822 41 H 0.083 0.917 42 H 0.403 0.597 43 H -0.284 1.284 44 H -0.279 1.279 45 H 0.146 0.854 46 H 0.179 0.821 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.580 -2.173 -3.517 6.170 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.080 4.080 2 O -0.241 6.241 3 C 0.096 3.904 4 C -0.026 4.026 5 O -0.075 6.075 6 C -0.077 4.077 7 C 0.409 3.591 8 O -0.421 6.421 9 N -0.354 5.354 10 C -0.025 4.025 11 C -0.152 4.152 12 C 0.044 3.956 13 C -0.157 4.157 14 C -0.167 4.167 15 C 0.014 3.986 16 F -0.222 7.222 17 C -0.158 4.158 18 C -0.131 4.131 19 C -0.098 4.098 20 C -0.070 4.070 21 C -0.197 4.197 22 O -0.374 6.374 23 Si 0.689 3.311 24 C -0.123 4.123 25 C -0.188 4.188 26 H 0.092 0.908 27 H 0.141 0.859 28 H 0.090 0.910 29 H 0.118 0.882 30 H 0.100 0.900 31 H 0.126 0.874 32 H 0.148 0.852 33 H 0.078 0.922 34 H 0.155 0.845 35 H 0.085 0.915 36 H 0.127 0.873 37 H 0.102 0.898 38 H 0.153 0.847 39 H 0.077 0.923 40 H 0.196 0.804 41 H 0.101 0.899 42 H 0.254 0.746 43 H -0.211 1.211 44 H -0.206 1.206 45 H 0.163 0.837 46 H 0.196 0.804 Dipole moment (debyes) X Y Z Total from point charges -5.059 -2.542 -3.590 6.704 hybrid contribution 0.028 0.197 0.359 0.411 sum -5.030 -2.344 -3.231 6.422 Atomic orbital electron populations 1.23514 0.75218 1.06345 1.02960 1.86148 1.24370 1.25227 1.88333 1.17843 0.86102 0.86729 0.99751 1.19209 0.88334 0.87226 1.07866 1.84069 1.12587 1.34633 1.76242 1.21969 0.83942 0.92595 1.09230 1.16224 0.85075 0.80813 0.76983 1.90868 1.31357 1.67235 1.52603 1.49591 1.13571 1.02277 1.69972 1.23365 0.93460 0.83255 1.02462 1.23320 0.91604 0.98985 1.01279 1.22686 0.90310 0.84409 0.98174 1.23302 0.94644 1.02100 0.95674 1.23088 0.95122 0.99812 0.98724 1.22239 0.95571 1.03124 0.77634 1.92730 1.93208 1.96339 1.39925 1.23086 0.93957 1.03648 0.95138 1.22833 0.95022 0.94369 1.00866 1.19590 0.92738 0.92619 1.04884 1.18887 0.92874 0.93277 1.01999 1.25025 1.06471 0.98979 0.89230 1.86471 1.78398 1.43824 1.28666 0.93979 0.76405 0.84444 0.76244 1.20692 0.93385 0.98367 0.99827 1.21289 1.01819 0.89550 1.06144 0.90797 0.85911 0.91003 0.88180 0.89951 0.87446 0.85175 0.92158 0.84529 0.91526 0.87309 0.89790 0.84719 0.92332 0.80417 0.89883 0.74574 1.21064 1.20590 0.83716 0.80379 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.33 -1.69 10.50 -93.19 -0.98 -2.67 16 3 C 0.14 1.06 6.70 22.57 0.15 1.21 16 4 C 0.02 0.25 7.35 23.14 0.17 0.42 16 5 O -0.17 -2.08 9.13 -13.32 -0.12 -2.20 16 6 C -0.03 -0.33 7.04 24.00 0.17 -0.17 16 7 C 0.62 7.73 8.04 86.54 0.70 8.43 16 8 O -0.54 -9.48 16.60 -4.18 -0.07 -9.55 16 9 N -0.62 -3.65 3.69 -825.04 -3.04 -6.69 16 10 C 0.10 -0.07 7.79 82.35 0.64 0.57 16 11 C -0.11 0.72 8.24 30.83 0.25 0.98 16 12 C 0.13 -0.03 1.43 -0.57 0.00 -0.03 16 13 C -0.12 0.12 7.51 30.93 0.23 0.36 16 14 C -0.15 -0.42 4.09 -10.18 -0.04 -0.46 16 15 C 0.07 0.01 7.35 71.98 0.53 0.53 16 16 F -0.24 -2.02 17.36 44.97 0.78 -1.24 16 17 C -0.12 0.04 7.19 30.93 0.22 0.26 16 18 C -0.11 -1.27 10.68 23.79 0.25 -1.01 16 19 C -0.10 -1.09 6.16 -20.24 -0.12 -1.21 16 20 C -0.07 -0.55 5.30 -19.87 -0.11 -0.65 16 21 C -0.09 -0.18 2.70 71.23 0.19 0.01 16 22 O -0.56 -1.49 12.86 -148.98 -1.92 -3.41 16 23 Si 0.79 -1.98 30.20 68.60 2.07 0.10 16 24 C -0.11 -0.55 8.62 22.02 0.19 -0.36 16 25 C -0.17 -0.55 9.03 22.40 0.20 -0.35 16 26 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 27 H 0.12 -0.98 8.14 -2.39 -0.02 -1.00 16 28 H 0.07 -0.48 7.66 -2.39 -0.02 -0.50 16 29 H 0.10 -0.26 8.14 -2.39 -0.02 -0.28 16 30 H 0.08 0.04 7.50 -2.38 -0.02 0.02 16 31 H 0.11 -0.74 8.14 -2.39 -0.02 -0.76 16 32 H 0.13 -1.57 8.14 -2.39 -0.02 -1.59 16 33 H 0.06 0.17 8.14 -2.38 -0.02 0.15 16 34 H 0.14 -1.03 7.97 -2.39 -0.02 -1.05 16 35 H 0.07 0.74 7.73 -2.39 -0.02 0.72 16 36 H 0.11 -0.69 7.95 -2.39 -0.02 -0.71 16 37 H 0.08 -0.14 8.14 -2.39 -0.02 -0.16 16 38 H 0.13 -0.98 8.10 -2.38 -0.02 -1.00 16 39 H 0.06 0.33 7.85 -2.39 -0.02 0.31 16 40 H 0.18 1.64 8.06 -2.91 -0.02 1.61 16 41 H 0.08 -0.03 7.96 -2.39 -0.02 -0.05 16 42 H 0.40 -3.30 8.74 -74.06 -0.65 -3.95 16 43 H -0.28 -0.72 7.11 99.48 0.71 -0.01 16 44 H -0.28 -0.66 6.75 99.48 0.67 0.01 16 45 H 0.15 0.30 4.85 -2.91 -0.01 0.29 16 46 H 0.18 -0.73 6.26 -2.91 -0.02 -0.74 16 Total: 0.00 -27.17 386.34 1.86 -25.31 By element: Atomic # 1 Polarization: -9.62 SS G_CDS: 0.39 Total: -9.23 kcal Atomic # 6 Polarization: 4.84 SS G_CDS: 4.74 Total: 9.58 kcal Atomic # 7 Polarization: -3.65 SS G_CDS: -3.04 Total: -6.69 kcal Atomic # 8 Polarization: -14.75 SS G_CDS: -3.09 Total: -17.83 kcal Atomic # 9 Polarization: -2.02 SS G_CDS: 0.78 Total: -1.24 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: 2.07 Total: 0.10 kcal Total: -27.17 1.86 -25.31 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321334_6672420.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -14.121 kcal (2) G-P(sol) polarization free energy of solvation -27.172 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -41.293 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.857 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.315 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.436 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds