Wall clock time and date at job start Tue Mar 9 2021 13:47:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45200 * 1 3 3 C 1.34229 * 117.00266 * 2 1 4 4 O 1.20822 * 119.99644 * 359.97438 * 3 2 1 5 5 C 1.50703 * 119.99944 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.46984 * 179.97438 * 5 3 2 7 7 H 1.08997 * 112.85264 * 316.20197 * 6 5 3 8 8 C 1.53788 * 113.68735 * 87.46568 * 6 5 3 9 9 C 1.53776 * 87.08054 * 139.99230 * 8 6 5 10 10 H 1.08996 * 113.69397 * 89.12460 * 9 8 6 11 11 N 1.46500 * 113.61519 * 220.02024 * 9 8 6 12 12 C 1.34776 * 119.99680 * 252.49755 * 11 9 8 13 13 O 1.21575 * 120.00252 * 0.02562 * 12 11 9 14 14 C 1.47712 * 119.99754 * 179.97438 * 12 11 9 15 15 N 1.31803 * 126.52137 * 359.97438 * 14 12 11 16 16 N 1.28471 * 110.07827 * 180.02562 * 15 14 12 17 17 C 1.46499 * 124.88621 * 180.02562 * 16 15 14 18 18 C 1.35034 * 110.22664 * 359.97438 * 16 15 14 19 19 C 1.50701 * 126.38376 * 180.02562 * 18 16 15 20 20 O 1.42905 * 109.46937 * 330.00149 * 19 18 16 21 21 Si 1.86301 * 109.47149 * 210.00078 * 19 18 16 22 22 C 1.35362 * 107.23125 * 0.26411 * 18 16 15 23 23 C 1.53778 * 113.61471 * 184.99702 * 6 5 3 24 24 H 1.09000 * 109.47016 * 300.00433 * 1 2 3 25 25 H 1.08995 * 109.46941 * 60.00073 * 1 2 3 26 26 H 1.08997 * 109.47653 * 180.02562 * 1 2 3 27 27 H 1.09002 * 109.47228 * 59.99654 * 5 3 2 28 28 H 1.09002 * 109.46976 * 299.99861 * 5 3 2 29 29 H 1.08995 * 113.61403 * 25.43946 * 8 6 5 30 30 H 1.09006 * 113.60953 * 254.54093 * 8 6 5 31 31 H 0.97000 * 120.00007 * 72.48877 * 11 9 8 32 32 H 1.08995 * 109.47398 * 269.95865 * 17 16 15 33 33 H 1.09000 * 109.47067 * 29.95758 * 17 16 15 34 34 H 1.09000 * 109.46888 * 149.94979 * 17 16 15 35 35 H 1.09001 * 109.46927 * 89.99893 * 19 18 16 36 36 H 0.96705 * 113.99788 * 300.00011 * 20 19 18 37 37 H 1.48498 * 109.99736 * 58.68050 * 21 19 18 38 38 H 1.48493 * 110.00101 * 179.97438 * 21 19 18 39 39 H 1.07996 * 127.24854 * 179.70029 * 22 18 16 40 40 H 1.08998 * 113.61480 * 105.38995 * 23 6 5 41 41 H 1.09007 * 113.69029 * 334.49965 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2747 -0.0006 6 6 4.0003 2.7419 -0.0011 7 1 3.4248 3.3533 -0.6962 8 6 4.1163 3.3524 1.4056 9 6 5.3816 4.0686 0.9049 10 1 5.1853 5.0428 0.4572 11 7 6.4652 4.1032 1.8902 12 6 6.7754 5.2589 2.5103 13 8 6.1557 6.2725 2.2524 14 6 7.8676 5.2936 3.5042 15 7 8.6179 4.2776 3.8810 16 7 9.4702 4.6616 4.7622 17 6 10.4633 3.7946 5.4011 18 6 9.3195 5.9797 5.0141 19 6 10.1278 6.8026 5.9841 20 8 10.5656 5.9735 7.0626 21 14 9.0747 8.1865 6.6524 22 6 8.3037 6.4229 4.2370 23 6 5.5209 2.9346 -0.1245 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3634 -1.0276 0.0005 27 1 3.9558 0.7807 -0.8908 28 1 3.9564 0.7804 0.8892 29 1 4.3108 2.6169 2.1861 30 1 3.3005 4.0309 1.6558 31 1 6.9593 3.2943 2.0963 32 1 10.0380 3.3600 6.3056 33 1 10.7460 2.9977 4.7133 34 1 11.3450 4.3811 5.6595 35 1 10.9946 7.2203 5.4719 36 1 9.8452 5.5674 7.5640 37 1 7.8732 7.6309 7.3254 38 1 9.8601 9.0050 7.6106 39 1 7.9099 7.4272 4.1859 40 1 5.8393 3.2757 -1.1095 41 1 6.1008 2.0854 0.2373 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17321982_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:47:41 Heat of formation + Delta-G solvation = -46.516469 kcal Electronic energy + Delta-G solvation = -25096.875875 eV Core-core repulsion = 21174.450133 eV Total energy + Delta-G solvation = -3922.425742 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 310.141 amu Computer time = 0.72 seconds Orbital eigenvalues (eV) -43.84171 -41.69485 -40.88672 -39.32985 -38.16195 -37.49245 -34.93126 -34.31424 -32.64798 -31.52071 -28.75969 -28.25209 -26.82555 -26.68918 -25.22665 -23.51463 -22.20104 -21.73066 -21.22062 -20.37404 -19.16230 -18.56446 -17.89802 -17.63782 -17.57956 -17.52086 -17.14852 -16.89074 -16.21232 -16.04857 -15.71312 -15.66778 -15.19158 -14.84016 -14.83596 -14.47976 -14.09016 -13.93390 -13.62393 -13.47681 -13.40752 -13.35131 -12.93324 -12.80240 -12.68920 -12.30221 -12.16291 -12.00465 -11.86760 -11.81505 -11.47413 -11.33901 -11.21232 -11.07837 -10.28520 -9.97840 -9.97046 -4.89326 0.43418 0.81764 1.18442 1.22338 1.54227 1.66850 1.77221 1.94023 2.16204 2.29081 3.09239 3.31161 3.35023 3.44491 3.49632 3.77525 3.83073 3.91078 4.00211 4.25887 4.27769 4.30369 4.30809 4.36044 4.45312 4.47754 4.50549 4.63401 4.65010 4.69001 4.70146 4.75000 4.81817 4.86716 5.02158 5.10016 5.25252 5.26559 5.41473 5.57874 5.67692 6.27390 6.40724 6.72029 6.82110 7.13007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.454 3.546 4 O -0.543 6.543 5 C -0.096 4.096 6 C -0.095 4.095 7 H 0.090 0.910 8 C -0.148 4.148 9 C 0.114 3.886 10 H 0.098 0.902 11 N -0.695 5.695 12 C 0.602 3.398 13 O -0.569 6.569 14 C -0.040 4.040 15 N -0.262 5.262 16 N -0.264 5.264 17 C 0.078 3.922 18 C -0.013 4.013 19 C -0.043 4.043 20 O -0.537 6.537 21 Si 0.780 3.220 22 C -0.189 4.189 23 C -0.118 4.118 24 H 0.057 0.943 25 H 0.059 0.941 26 H 0.128 0.872 27 H 0.136 0.864 28 H 0.130 0.870 29 H 0.097 0.903 30 H 0.051 0.949 31 H 0.417 0.583 32 H 0.100 0.900 33 H 0.103 0.897 34 H 0.116 0.884 35 H 0.147 0.853 36 H 0.388 0.612 37 H -0.296 1.296 38 H -0.283 1.283 39 H 0.180 0.820 40 H 0.090 0.910 41 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.961 -5.497 0.569 7.427 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.284 6.284 3 C 0.299 3.701 4 O -0.433 6.433 5 C -0.133 4.133 6 C -0.114 4.114 7 H 0.109 0.891 8 C -0.186 4.186 9 C 0.009 3.991 10 H 0.116 0.884 11 N -0.345 5.345 12 C 0.388 3.612 13 O -0.446 6.446 14 C -0.198 4.198 15 N -0.100 5.100 16 N -0.054 5.054 17 C -0.061 4.061 18 C -0.138 4.138 19 C -0.153 4.153 20 O -0.344 6.344 21 Si 0.683 3.317 22 C -0.217 4.217 23 C -0.156 4.156 24 H 0.076 0.924 25 H 0.078 0.922 26 H 0.146 0.854 27 H 0.154 0.846 28 H 0.148 0.852 29 H 0.115 0.885 30 H 0.070 0.930 31 H 0.254 0.746 32 H 0.118 0.882 33 H 0.121 0.879 34 H 0.134 0.866 35 H 0.164 0.836 36 H 0.238 0.762 37 H -0.222 1.222 38 H -0.210 1.210 39 H 0.197 0.803 40 H 0.108 0.892 41 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 4.788 -5.196 0.744 7.105 hybrid contribution -0.610 -0.303 0.917 1.142 sum 4.178 -5.499 1.661 7.103 Atomic orbital electron populations 1.23470 0.75372 1.05439 1.02226 1.86509 1.24550 1.33498 1.83831 1.24575 0.93627 0.80813 0.71041 1.90683 1.68336 1.37505 1.46783 1.21535 0.85007 0.98471 1.08319 1.22138 0.96984 0.94524 0.97741 0.89150 1.23578 0.97323 1.00079 0.97667 1.22575 0.86459 1.00059 0.89961 0.88387 1.45755 1.36271 1.11077 1.41405 1.17131 0.81030 0.83649 0.79434 1.90790 1.53403 1.35083 1.65344 1.21814 1.01385 0.92483 1.04148 1.73446 1.03489 1.26430 1.06660 1.45704 1.24662 1.07692 1.27309 1.22617 0.89838 0.94819 0.98832 1.22159 1.01334 0.86370 1.03934 1.24818 1.05253 0.98313 0.86917 1.86582 1.37402 1.65316 1.45144 0.93228 0.74813 0.78997 0.84666 1.21724 0.98905 1.01020 1.00015 1.23358 0.94744 0.97908 0.99566 0.92400 0.92201 0.85411 0.84576 0.85194 0.88477 0.93048 0.74601 0.88174 0.87853 0.86558 0.83588 0.76203 1.22235 1.20988 0.80296 0.89186 0.86609 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.01 10.56 113.37 1.20 1.19 16 2 O -0.37 -0.97 10.57 -51.41 -0.54 -1.52 16 3 C 0.45 1.61 7.96 71.24 0.57 2.17 16 4 O -0.54 -6.00 15.51 21.97 0.34 -5.66 16 5 C -0.10 0.47 5.65 29.85 0.17 0.64 16 6 C -0.09 0.20 3.15 -10.27 -0.03 0.16 16 7 H 0.09 0.17 7.68 -2.39 -0.02 0.15 16 8 C -0.15 -0.19 7.43 31.12 0.23 0.04 16 9 C 0.11 0.16 4.24 45.52 0.19 0.36 16 10 H 0.10 0.60 7.46 -2.39 -0.02 0.58 16 11 N -0.69 -1.71 5.35 -443.04 -2.37 -4.08 16 12 C 0.60 5.46 7.82 86.75 0.68 6.14 16 13 O -0.57 -9.14 16.53 -3.95 -0.07 -9.20 16 14 C -0.04 -0.27 7.13 42.46 0.30 0.03 16 15 N -0.26 -1.02 11.67 -48.17 -0.56 -1.58 16 16 N -0.26 -0.01 3.70 -355.94 -1.32 -1.33 16 17 C 0.08 -0.56 10.12 127.77 1.29 0.73 16 18 C -0.01 0.00 6.18 41.40 0.26 0.26 16 19 C -0.04 0.20 2.87 71.24 0.20 0.40 16 20 O -0.54 2.58 10.40 -148.98 -1.55 1.03 16 21 Si 0.78 -2.54 31.22 68.60 2.14 -0.39 16 22 C -0.19 -0.70 9.35 22.41 0.21 -0.49 16 23 C -0.12 0.65 7.39 31.12 0.23 0.88 16 24 H 0.06 0.04 8.13 -2.39 -0.02 0.02 16 25 H 0.06 0.03 8.13 -2.39 -0.02 0.01 16 26 H 0.13 -0.77 8.14 -2.39 -0.02 -0.79 16 27 H 0.14 -1.31 8.14 -2.39 -0.02 -1.33 16 28 H 0.13 -1.16 7.85 -2.39 -0.02 -1.18 16 29 H 0.10 -0.12 7.90 -2.39 -0.02 -0.14 16 30 H 0.05 0.35 8.14 -2.38 -0.02 0.33 16 31 H 0.42 -0.78 8.45 -92.71 -0.78 -1.57 16 32 H 0.10 -1.01 8.14 -2.39 -0.02 -1.03 16 33 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 34 H 0.12 -1.00 6.77 -2.39 -0.02 -1.01 16 35 H 0.15 -1.10 7.96 -2.39 -0.02 -1.12 16 36 H 0.39 -3.54 8.70 -74.05 -0.64 -4.18 16 37 H -0.30 -1.02 7.11 99.48 0.71 -0.31 16 38 H -0.28 -0.70 7.11 99.48 0.71 0.01 16 39 H 0.18 0.14 7.01 -2.91 -0.02 0.12 16 40 H 0.09 -0.56 8.14 -2.39 -0.02 -0.58 16 41 H 0.12 -1.16 8.08 -2.38 -0.02 -1.18 16 Total: 0.00 -25.60 352.00 1.26 -24.35 By element: Atomic # 1 Polarization: -13.80 SS G_CDS: -0.32 Total: -14.12 kcal Atomic # 6 Polarization: 7.00 SS G_CDS: 5.50 Total: 12.50 kcal Atomic # 7 Polarization: -2.74 SS G_CDS: -4.25 Total: -6.99 kcal Atomic # 8 Polarization: -13.53 SS G_CDS: -1.82 Total: -15.35 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: 2.14 Total: -0.39 kcal Total: -25.60 1.26 -24.35 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17321982_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -22.169 kcal (2) G-P(sol) polarization free energy of solvation -25.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -47.773 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.257 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.347 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.516 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.72 seconds