Wall clock time and date at job start Tue Mar 9 2021 13:48:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28465 * 124.88594 * 2 1 4 4 C 1.31816 * 110.07671 * 180.13341 * 3 2 1 5 5 C 1.47710 * 126.51761 * 179.85662 * 4 3 2 6 6 O 1.21572 * 119.99633 * 179.68372 * 5 4 3 7 7 N 1.34767 * 120.00411 * 359.68935 * 5 4 3 8 8 C 1.46498 * 120.00411 * 179.97438 * 7 5 4 9 9 H 1.08994 * 109.47243 * 325.00379 * 8 7 5 10 10 C 1.53007 * 109.46881 * 84.99878 * 8 7 5 11 11 C 1.52997 * 109.47152 * 60.00294 * 10 8 7 12 12 C 1.53003 * 109.47247 * 59.99790 * 11 10 8 13 13 H 1.09000 * 109.46778 * 60.00218 * 12 11 10 14 14 C 1.52997 * 109.47247 * 180.02562 * 12 11 10 15 15 N 1.46906 * 109.46982 * 296.40645 * 14 12 11 16 16 H 1.00896 * 109.47106 * 54.06529 * 15 14 12 17 17 C 1.46899 * 109.46845 * 174.06969 * 15 14 12 18 18 C 1.46899 * 109.47153 * 294.06734 * 15 14 12 19 19 C 1.52999 * 109.47307 * 300.00342 * 12 11 10 20 20 C 1.52993 * 109.47557 * 204.99739 * 8 7 5 21 21 C 1.41502 * 106.95670 * 359.59507 * 4 3 2 22 22 C 1.35038 * 124.88711 * 179.67552 * 2 1 3 23 23 C 1.50704 * 126.38144 * 0.05069 * 22 2 1 24 24 O 1.42897 * 109.47191 * 30.00639 * 23 22 2 25 25 Si 1.86303 * 109.46656 * 150.00123 * 23 22 2 26 26 H 1.08997 * 109.46932 * 270.32718 * 1 2 3 27 27 H 1.08999 * 109.46791 * 30.32872 * 1 2 3 28 28 H 1.08999 * 109.46958 * 150.32468 * 1 2 3 29 29 H 0.97007 * 119.99839 * 359.97438 * 7 5 4 30 30 H 1.08996 * 109.46823 * 300.00298 * 10 8 7 31 31 H 1.08993 * 109.46942 * 180.02562 * 10 8 7 32 32 H 1.09000 * 109.47053 * 300.00177 * 11 10 8 33 33 H 1.09001 * 109.47317 * 180.02562 * 11 10 8 34 34 H 1.08992 * 109.47180 * 56.40428 * 14 12 11 35 35 H 1.08993 * 109.47211 * 176.40734 * 14 12 11 36 36 H 1.08998 * 109.47434 * 60.00032 * 17 15 14 37 37 H 1.09004 * 109.47079 * 180.02562 * 17 15 14 38 38 H 1.09001 * 109.47084 * 299.99712 * 17 15 14 39 39 H 1.09006 * 109.46859 * 306.18340 * 18 15 14 40 40 H 1.08993 * 109.47256 * 66.18193 * 18 15 14 41 41 H 1.08995 * 109.47244 * 186.18918 * 18 15 14 42 42 H 1.08997 * 109.47389 * 180.02562 * 19 12 11 43 43 H 1.09009 * 109.46557 * 299.99880 * 19 12 11 44 44 H 1.08996 * 109.47753 * 179.97438 * 20 8 7 45 45 H 1.09004 * 109.47359 * 60.00293 * 20 8 7 46 46 H 1.08003 * 127.24070 * 180.26121 * 21 4 3 47 47 H 1.08999 * 109.47090 * 270.00288 * 23 22 2 48 48 H 0.96696 * 114.00324 * 59.99198 * 24 23 22 49 49 H 1.48500 * 109.99700 * 180.02562 * 25 23 22 50 50 H 1.48492 * 110.00116 * 301.31977 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7169 -0.0029 5 6 4.6273 1.6399 -0.0068 6 8 5.7598 1.1977 -0.0034 7 7 4.4242 2.9721 -0.0141 8 6 5.5679 3.8876 -0.0174 9 1 6.3769 3.4605 0.5752 10 6 6.0465 4.1005 -1.4551 11 6 4.9110 4.7000 -2.2870 12 6 4.4915 6.0426 -1.6850 13 1 5.3425 6.7236 -1.6875 14 6 3.3556 6.6418 -2.5166 15 7 3.8399 6.9260 -3.8741 16 1 4.2457 6.0905 -4.2682 17 6 2.7170 7.3674 -4.7121 18 6 4.8562 7.9853 -3.8197 19 6 4.0130 5.8297 -0.2474 20 6 5.1485 5.2301 0.5845 21 6 3.5272 -0.6971 0.0047 22 6 2.2374 -1.1077 0.0063 23 6 1.7534 -2.5349 0.0133 24 8 0.4961 -2.6148 -0.6610 25 14 2.9953 -3.6159 -0.8585 26 1 -0.3633 0.0059 1.0276 27 1 -0.3633 0.8870 -0.5189 28 1 -0.3633 -0.8929 -0.5088 29 1 3.5206 3.3250 -0.0171 30 1 6.3453 3.1440 -1.8839 31 1 6.8977 4.7812 -1.4575 32 1 4.0600 4.0189 -2.2845 33 1 5.2518 4.8513 -3.3113 34 1 2.5291 5.9331 -2.5667 35 1 3.0137 7.5664 -2.0518 36 1 2.2787 8.2700 -4.2863 37 1 3.0762 7.5779 -5.7195 38 1 1.9629 6.5814 -4.7525 39 1 4.4513 8.8507 -3.2949 40 1 5.7356 7.6182 -3.2905 41 1 5.1358 8.2730 -4.8331 42 1 3.7137 6.7860 0.1813 43 1 3.1619 5.1485 -0.2450 44 1 5.9995 5.9111 0.5825 45 1 4.8076 5.0785 1.6087 46 1 4.4109 -1.3180 0.0087 47 1 1.6359 -2.8736 1.0426 48 1 0.5257 -2.3280 -1.5840 49 1 2.5294 -5.0259 -0.8590 50 1 3.1882 -3.1447 -2.2534 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_17509652_13259642.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:31 Heat of formation + Delta-G solvation = 139.204163 kcal Electronic energy + Delta-G solvation = -29019.804227 eV Core-core repulsion = 25169.790334 eV Total energy + Delta-G solvation = -3850.013893 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.207 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -44.65511 -44.54081 -42.11183 -40.16245 -39.08485 -36.44302 -35.27440 -33.82408 -33.47957 -33.08329 -31.91264 -30.14047 -29.26956 -27.84796 -27.51737 -25.54276 -25.18182 -24.19334 -23.07906 -22.32060 -21.77039 -21.41002 -20.19471 -19.93260 -19.66936 -18.60723 -18.40737 -18.24036 -17.85640 -17.72780 -17.17182 -17.05556 -16.80877 -16.60754 -16.30374 -16.26761 -16.12625 -16.03392 -15.84874 -15.72689 -15.64206 -15.60368 -15.05799 -14.83628 -14.82314 -14.65389 -14.54684 -14.46876 -14.28039 -13.73340 -13.40625 -13.32042 -13.04295 -12.97180 -12.70936 -12.66745 -12.03727 -11.82357 -11.18140 -10.92638 -10.74255 -5.66863 -1.45382 -0.33218 0.04787 0.37888 0.49306 0.55242 0.71011 0.72615 0.92080 1.13283 1.25326 1.37082 1.44783 1.55653 1.66406 1.76578 1.81278 1.85555 2.00402 2.14653 2.18770 2.20372 2.26917 2.30175 2.42664 2.47001 2.52421 2.54591 2.60965 2.71524 2.88649 2.91685 3.01825 3.11017 3.25078 3.30098 3.37141 3.44082 3.57681 3.58790 3.63901 3.64872 3.72951 3.75514 3.84725 3.93290 3.95954 4.41290 4.52289 4.80005 5.29577 5.45428 5.99720 6.30751 Molecular weight = 324.21amu Principal moments of inertia in cm(-1) A = 0.015811 B = 0.003189 C = 0.002964 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1770.462718 B = 8777.087153 C = 9445.139473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.069 3.931 2 N -0.263 5.263 3 N -0.263 5.263 4 C -0.023 4.023 5 C 0.609 3.391 6 O -0.520 6.520 7 N -0.719 5.719 8 C 0.143 3.857 9 H 0.100 0.900 10 C -0.130 4.130 11 C -0.128 4.128 12 C -0.115 4.115 13 H 0.098 0.902 14 C -0.008 4.008 15 N -0.389 5.389 16 H 0.425 0.575 17 C -0.048 4.048 18 C -0.052 4.052 19 C -0.113 4.113 20 C -0.129 4.129 21 C -0.169 4.169 22 C -0.014 4.014 23 C -0.052 4.052 24 O -0.528 6.528 25 Si 0.717 3.283 26 H 0.087 0.913 27 H 0.092 0.908 28 H 0.120 0.880 29 H 0.403 0.597 30 H 0.081 0.919 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.057 0.943 34 H 0.130 0.870 35 H 0.132 0.868 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.124 0.876 41 H 0.124 0.876 42 H 0.080 0.920 43 H 0.073 0.927 44 H 0.086 0.914 45 H 0.083 0.917 46 H 0.173 0.827 47 H 0.132 0.868 48 H 0.378 0.622 49 H -0.247 1.247 50 H -0.256 1.256 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.064 22.803 -12.371 25.964 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.051 5.051 3 N -0.101 5.101 4 C -0.182 4.182 5 C 0.394 3.606 6 O -0.393 6.393 7 N -0.373 5.373 8 C 0.038 3.962 9 H 0.118 0.882 10 C -0.169 4.169 11 C -0.166 4.166 12 C -0.134 4.134 13 H 0.116 0.884 14 C -0.130 4.130 15 N 0.034 4.966 16 H 0.261 0.739 17 C -0.190 4.190 18 C -0.194 4.194 19 C -0.152 4.152 20 C -0.167 4.167 21 C -0.197 4.197 22 C -0.138 4.138 23 C -0.162 4.162 24 O -0.335 6.335 25 Si 0.614 3.386 26 H 0.106 0.894 27 H 0.110 0.890 28 H 0.137 0.863 29 H 0.239 0.761 30 H 0.100 0.900 31 H 0.098 0.902 32 H 0.098 0.902 33 H 0.076 0.924 34 H 0.148 0.852 35 H 0.150 0.850 36 H 0.141 0.859 37 H 0.143 0.857 38 H 0.141 0.859 39 H 0.142 0.858 40 H 0.142 0.858 41 H 0.143 0.857 42 H 0.099 0.901 43 H 0.091 0.909 44 H 0.105 0.895 45 H 0.102 0.898 46 H 0.190 0.810 47 H 0.150 0.850 48 H 0.227 0.773 49 H -0.171 1.171 50 H -0.180 1.180 Dipole moment (debyes) X Y Z Total from point charges -1.250 22.876 -12.361 26.032 hybrid contribution -0.884 -0.193 -0.660 1.120 sum -2.134 22.683 -13.021 26.242 Atomic orbital electron populations 1.22658 0.72366 1.06512 1.05499 1.45355 1.07998 1.02168 1.49619 1.73397 1.02802 1.14403 1.19477 1.21714 0.90667 0.93939 1.11837 1.16873 0.86685 0.81333 0.75742 1.90859 1.22479 1.76951 1.49027 1.45926 1.10042 1.05295 1.75998 1.20976 0.89606 0.89284 0.96296 0.88235 1.21899 0.97120 1.02583 0.95298 1.21777 1.01036 0.95514 0.98236 1.21830 0.96528 0.98338 0.96709 0.88355 1.24183 1.01593 1.07325 0.79880 1.45129 1.16655 1.18430 1.16361 0.73859 1.24142 0.89926 1.06714 0.98190 1.24183 0.93475 0.92174 1.09567 1.21518 0.99220 1.02541 0.91880 1.21836 0.98999 0.95679 1.00141 1.21484 0.96455 0.93738 1.08046 1.21974 0.91331 0.91466 1.09064 1.24851 0.93467 0.93369 1.04481 1.86607 1.29640 1.88402 1.28809 0.94096 0.84726 0.78186 0.81549 0.89435 0.88977 0.86254 0.76081 0.90012 0.90214 0.90239 0.92445 0.85193 0.85010 0.85886 0.85719 0.85912 0.85831 0.85758 0.85719 0.90113 0.90868 0.89519 0.89798 0.80973 0.85046 0.77322 1.17078 1.18014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.85 11.00 59.85 0.66 -0.19 16 2 N -0.26 2.54 3.70 -63.85 -0.24 2.31 16 3 N -0.26 2.47 11.67 33.42 0.39 2.86 16 4 C -0.02 0.19 7.13 -82.76 -0.59 -0.40 16 5 C 0.61 -5.56 7.79 -12.39 -0.10 -5.65 16 6 O -0.52 2.91 16.59 5.30 0.09 3.00 16 7 N -0.72 9.91 4.23 -54.80 -0.23 9.68 16 8 C 0.14 -2.22 2.78 -67.93 -0.19 -2.41 16 9 H 0.10 -1.23 7.58 -51.93 -0.39 -1.63 16 10 C -0.13 2.32 5.60 -26.73 -0.15 2.17 16 11 C -0.13 2.92 4.78 -26.73 -0.13 2.79 16 12 C -0.12 2.95 2.07 -90.62 -0.19 2.77 16 13 H 0.10 -2.60 6.40 -51.93 -0.33 -2.93 16 14 C -0.01 0.24 4.14 -3.82 -0.02 0.23 16 15 N -0.39 12.35 0.66 -251.27 -0.16 12.19 16 16 H 0.42 -13.80 6.53 -39.29 -0.26 -14.05 16 17 C -0.05 1.49 9.17 60.06 0.55 2.04 16 18 C -0.05 1.61 8.86 60.06 0.53 2.14 16 19 C -0.11 2.48 5.03 -26.73 -0.13 2.35 16 20 C -0.13 2.35 5.61 -26.73 -0.15 2.20 16 21 C -0.17 1.44 9.35 -39.37 -0.37 1.07 16 22 C -0.01 0.13 6.18 -82.21 -0.51 -0.38 16 23 C -0.05 0.53 2.99 36.01 0.11 0.63 16 24 O -0.53 5.30 10.02 -35.23 -0.35 4.95 16 25 Si 0.72 -7.03 31.23 -169.99 -5.31 -12.34 16 26 H 0.09 -1.06 8.14 -51.93 -0.42 -1.48 16 27 H 0.09 -1.27 8.14 -51.93 -0.42 -1.69 16 28 H 0.12 -1.53 5.01 -51.93 -0.26 -1.79 16 29 H 0.40 -6.25 6.59 -40.82 -0.27 -6.52 16 30 H 0.08 -1.17 8.14 -51.93 -0.42 -1.59 16 31 H 0.08 -1.48 8.14 -51.93 -0.42 -1.90 16 32 H 0.08 -1.69 7.60 -51.93 -0.39 -2.09 16 33 H 0.06 -1.45 6.57 -51.93 -0.34 -1.79 16 34 H 0.13 -3.84 8.07 -51.93 -0.42 -4.25 16 35 H 0.13 -3.96 7.99 -51.93 -0.41 -4.37 16 36 H 0.12 -3.80 8.14 -51.93 -0.42 -4.22 16 37 H 0.12 -3.87 8.10 -51.93 -0.42 -4.29 16 38 H 0.12 -3.79 8.10 -51.93 -0.42 -4.21 16 39 H 0.12 -3.80 7.99 -51.93 -0.41 -4.21 16 40 H 0.12 -3.77 6.55 -51.93 -0.34 -4.11 16 41 H 0.12 -3.85 8.07 -51.93 -0.42 -4.27 16 42 H 0.08 -1.78 8.14 -51.93 -0.42 -2.21 16 43 H 0.07 -1.55 6.51 -51.92 -0.34 -1.89 16 44 H 0.09 -1.62 8.14 -51.93 -0.42 -2.05 16 45 H 0.08 -1.37 8.14 -51.93 -0.42 -1.79 16 46 H 0.17 -1.68 7.03 -52.48 -0.37 -2.05 16 47 H 0.13 -1.40 7.96 -51.93 -0.41 -1.82 16 48 H 0.38 -4.85 8.39 45.56 0.38 -4.47 16 49 H -0.25 1.57 7.11 56.52 0.40 1.97 16 50 H -0.26 1.93 7.11 56.52 0.40 2.34 16 LS Contribution 380.96 15.07 5.74 5.74 Total: 1.00 -36.46 380.96 -9.16 -45.61 By element: Atomic # 1 Polarization: -74.96 SS G_CDS: -8.41 Total: -83.37 kcal Atomic # 6 Polarization: 10.04 SS G_CDS: -0.67 Total: 9.37 kcal Atomic # 7 Polarization: 27.28 SS G_CDS: -0.24 Total: 27.04 kcal Atomic # 8 Polarization: 8.21 SS G_CDS: -0.27 Total: 7.95 kcal Atomic # 14 Polarization: -7.03 SS G_CDS: -5.31 Total: -12.34 kcal Total LS contribution 5.74 Total: 5.74 kcal Total: -36.46 -9.16 -45.61 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17509652_13259642.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 184.817 kcal (2) G-P(sol) polarization free energy of solvation -36.456 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 148.361 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.157 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -45.613 kcal (6) G-S(sol) free energy of system = (1) + (5) 139.204 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds