Wall clock time and date at job start Tue Mar 9 2021 13:48:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28465 * 124.88594 * 2 1 4 4 C 1.31816 * 110.07671 * 180.13341 * 3 2 1 5 5 C 1.47710 * 126.51761 * 179.85662 * 4 3 2 6 6 O 1.21572 * 119.99633 * 179.68372 * 5 4 3 7 7 N 1.34767 * 120.00411 * 359.68935 * 5 4 3 8 8 C 1.46498 * 120.00411 * 179.97438 * 7 5 4 9 9 H 1.08994 * 109.47243 * 325.00379 * 8 7 5 10 10 C 1.53007 * 109.46881 * 84.99878 * 8 7 5 11 11 C 1.52997 * 109.47152 * 60.00294 * 10 8 7 12 12 C 1.53003 * 109.47247 * 59.99790 * 11 10 8 13 13 H 1.09000 * 109.46778 * 60.00218 * 12 11 10 14 14 C 1.52997 * 109.47247 * 180.02562 * 12 11 10 15 15 N 1.46906 * 109.46982 * 296.40645 * 14 12 11 16 16 H 1.00896 * 109.47106 * 54.06529 * 15 14 12 17 17 C 1.46899 * 109.46845 * 174.06969 * 15 14 12 18 18 C 1.46899 * 109.47153 * 294.06734 * 15 14 12 19 19 C 1.52999 * 109.47307 * 300.00342 * 12 11 10 20 20 C 1.52993 * 109.47557 * 204.99739 * 8 7 5 21 21 C 1.41502 * 106.95670 * 359.59507 * 4 3 2 22 22 C 1.35038 * 124.88711 * 179.67552 * 2 1 3 23 23 C 1.50704 * 126.38144 * 0.05069 * 22 2 1 24 24 O 1.42897 * 109.47191 * 30.00639 * 23 22 2 25 25 Si 1.86303 * 109.46656 * 150.00123 * 23 22 2 26 26 H 1.08997 * 109.46932 * 270.32718 * 1 2 3 27 27 H 1.08999 * 109.46791 * 30.32872 * 1 2 3 28 28 H 1.08999 * 109.46958 * 150.32468 * 1 2 3 29 29 H 0.97007 * 119.99839 * 359.97438 * 7 5 4 30 30 H 1.08996 * 109.46823 * 300.00298 * 10 8 7 31 31 H 1.08993 * 109.46942 * 180.02562 * 10 8 7 32 32 H 1.09000 * 109.47053 * 300.00177 * 11 10 8 33 33 H 1.09001 * 109.47317 * 180.02562 * 11 10 8 34 34 H 1.08992 * 109.47180 * 56.40428 * 14 12 11 35 35 H 1.08993 * 109.47211 * 176.40734 * 14 12 11 36 36 H 1.08998 * 109.47434 * 60.00032 * 17 15 14 37 37 H 1.09004 * 109.47079 * 180.02562 * 17 15 14 38 38 H 1.09001 * 109.47084 * 299.99712 * 17 15 14 39 39 H 1.09006 * 109.46859 * 306.18340 * 18 15 14 40 40 H 1.08993 * 109.47256 * 66.18193 * 18 15 14 41 41 H 1.08995 * 109.47244 * 186.18918 * 18 15 14 42 42 H 1.08997 * 109.47389 * 180.02562 * 19 12 11 43 43 H 1.09009 * 109.46557 * 299.99880 * 19 12 11 44 44 H 1.08996 * 109.47753 * 179.97438 * 20 8 7 45 45 H 1.09004 * 109.47359 * 60.00293 * 20 8 7 46 46 H 1.08003 * 127.24070 * 180.26121 * 21 4 3 47 47 H 1.08999 * 109.47090 * 270.00288 * 23 22 2 48 48 H 0.96696 * 114.00324 * 59.99198 * 24 23 22 49 49 H 1.48500 * 109.99700 * 180.02562 * 25 23 22 50 50 H 1.48492 * 110.00116 * 301.31977 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4741 0.7169 -0.0029 5 6 4.6273 1.6399 -0.0068 6 8 5.7598 1.1977 -0.0034 7 7 4.4242 2.9721 -0.0141 8 6 5.5679 3.8876 -0.0174 9 1 6.3769 3.4605 0.5752 10 6 6.0465 4.1005 -1.4551 11 6 4.9110 4.7000 -2.2870 12 6 4.4915 6.0426 -1.6850 13 1 5.3425 6.7236 -1.6875 14 6 3.3556 6.6418 -2.5166 15 7 3.8399 6.9260 -3.8741 16 1 4.2457 6.0905 -4.2682 17 6 2.7170 7.3674 -4.7121 18 6 4.8562 7.9853 -3.8197 19 6 4.0130 5.8297 -0.2474 20 6 5.1485 5.2301 0.5845 21 6 3.5272 -0.6971 0.0047 22 6 2.2374 -1.1077 0.0063 23 6 1.7534 -2.5349 0.0133 24 8 0.4961 -2.6148 -0.6610 25 14 2.9953 -3.6159 -0.8585 26 1 -0.3633 0.0059 1.0276 27 1 -0.3633 0.8870 -0.5189 28 1 -0.3633 -0.8929 -0.5088 29 1 3.5206 3.3250 -0.0171 30 1 6.3453 3.1440 -1.8839 31 1 6.8977 4.7812 -1.4575 32 1 4.0600 4.0189 -2.2845 33 1 5.2518 4.8513 -3.3113 34 1 2.5291 5.9331 -2.5667 35 1 3.0137 7.5664 -2.0518 36 1 2.2787 8.2700 -4.2863 37 1 3.0762 7.5779 -5.7195 38 1 1.9629 6.5814 -4.7525 39 1 4.4513 8.8507 -3.2949 40 1 5.7356 7.6182 -3.2905 41 1 5.1358 8.2730 -4.8331 42 1 3.7137 6.7860 0.1813 43 1 3.1619 5.1485 -0.2450 44 1 5.9995 5.9111 0.5825 45 1 4.8076 5.0785 1.6087 46 1 4.4109 -1.3180 0.0087 47 1 1.6359 -2.8736 1.0426 48 1 0.5257 -2.3280 -1.5840 49 1 2.5294 -5.0259 -0.8590 50 1 3.1882 -3.1447 -2.2534 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17509652_13259642.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:48:30 Heat of formation + Delta-G solvation = 114.319510 kcal Electronic energy + Delta-G solvation = -29020.883307 eV Core-core repulsion = 25169.790334 eV Total energy + Delta-G solvation = -3851.092972 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.207 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.88481 -42.25182 -40.92372 -38.91946 -38.29531 -35.15829 -34.42931 -32.82247 -31.91866 -31.83268 -29.39100 -28.71461 -27.79602 -26.77942 -25.51727 -24.53156 -23.63793 -22.44600 -22.29307 -21.29350 -20.20425 -19.31602 -19.26188 -17.74398 -17.64857 -17.59097 -17.32176 -17.19586 -16.74465 -16.43953 -16.09618 -15.82118 -15.69311 -15.35626 -15.02041 -14.86614 -14.79781 -14.20459 -14.15194 -13.90963 -13.71000 -13.57218 -13.50962 -13.42867 -13.25067 -13.24816 -13.10923 -12.91634 -12.70850 -12.61799 -12.29809 -12.17304 -12.05984 -11.59704 -11.42817 -11.34514 -11.19083 -11.05999 -10.33851 -10.03116 -10.00898 -4.94090 0.40292 0.77053 1.01931 1.15827 1.51197 1.60166 1.90600 2.09548 2.28304 2.87253 2.98451 2.99100 3.21293 3.29314 3.29470 3.52027 3.55737 3.71379 3.85876 4.01431 4.05829 4.12698 4.18718 4.25479 4.27924 4.29554 4.30719 4.35102 4.37411 4.39396 4.43584 4.46663 4.51998 4.58598 4.62961 4.69279 4.71644 4.72693 4.83382 4.85694 4.86075 5.02853 5.07244 5.14037 5.19252 5.22973 5.30596 5.32663 5.49394 5.61065 6.21583 6.36773 6.77753 7.12002 Molecular weight = 324.21amu Principal moments of inertia in cm(-1) A = 0.015811 B = 0.003189 C = 0.002964 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1770.462718 B = 8777.087153 C = 9445.139473 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.263 5.263 3 N -0.256 5.256 4 C -0.040 4.040 5 C 0.603 3.397 6 O -0.568 6.568 7 N -0.696 5.696 8 C 0.136 3.864 9 H 0.056 0.944 10 C -0.130 4.130 11 C -0.125 4.125 12 C -0.105 4.105 13 H 0.115 0.885 14 C 0.002 3.998 15 N -0.375 5.375 16 H 0.430 0.570 17 C -0.047 4.047 18 C -0.056 4.056 19 C -0.113 4.113 20 C -0.125 4.125 21 C -0.190 4.190 22 C -0.014 4.014 23 C -0.043 4.043 24 O -0.535 6.535 25 Si 0.778 3.222 26 H 0.088 0.912 27 H 0.111 0.889 28 H 0.126 0.874 29 H 0.413 0.587 30 H 0.040 0.960 31 H 0.090 0.910 32 H 0.067 0.933 33 H 0.091 0.909 34 H 0.136 0.864 35 H 0.147 0.853 36 H 0.123 0.877 37 H 0.125 0.875 38 H 0.122 0.878 39 H 0.126 0.874 40 H 0.122 0.878 41 H 0.126 0.874 42 H 0.093 0.907 43 H 0.067 0.933 44 H 0.095 0.905 45 H 0.060 0.940 46 H 0.176 0.824 47 H 0.140 0.860 48 H 0.390 0.610 49 H -0.292 1.292 50 H -0.286 1.286 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.651 25.326 -13.566 28.853 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.075 4.075 2 N -0.052 5.052 3 N -0.094 5.094 4 C -0.199 4.199 5 C 0.388 3.612 6 O -0.445 6.445 7 N -0.349 5.349 8 C 0.032 3.968 9 H 0.075 0.925 10 C -0.168 4.168 11 C -0.162 4.162 12 C -0.124 4.124 13 H 0.133 0.867 14 C -0.120 4.120 15 N 0.048 4.952 16 H 0.268 0.732 17 C -0.189 4.189 18 C -0.198 4.198 19 C -0.151 4.151 20 C -0.163 4.163 21 C -0.218 4.218 22 C -0.139 4.139 23 C -0.154 4.154 24 O -0.344 6.344 25 Si 0.681 3.319 26 H 0.107 0.893 27 H 0.129 0.871 28 H 0.144 0.856 29 H 0.252 0.748 30 H 0.059 0.941 31 H 0.109 0.891 32 H 0.086 0.914 33 H 0.110 0.890 34 H 0.154 0.846 35 H 0.165 0.835 36 H 0.142 0.858 37 H 0.144 0.856 38 H 0.140 0.860 39 H 0.144 0.856 40 H 0.140 0.860 41 H 0.144 0.856 42 H 0.112 0.888 43 H 0.086 0.914 44 H 0.113 0.887 45 H 0.078 0.922 46 H 0.193 0.807 47 H 0.158 0.842 48 H 0.241 0.759 49 H -0.219 1.219 50 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -2.862 25.451 -13.559 28.979 hybrid contribution -0.389 -0.999 -0.289 1.111 sum -3.251 24.452 -13.849 28.288 Atomic orbital electron populations 1.22879 0.70807 1.07810 1.05975 1.45665 1.08892 1.01871 1.48819 1.73369 1.02355 1.14469 1.19227 1.21871 0.91149 0.94253 1.12583 1.17004 0.85965 0.82608 0.75631 1.90822 1.24018 1.77914 1.51727 1.45840 1.11230 1.04051 1.73782 1.21128 0.87895 0.89958 0.97813 0.92531 1.21836 0.99635 1.01276 0.94079 1.21760 0.98524 0.96557 0.99384 1.21646 0.98650 0.97210 0.94854 0.86676 1.23961 0.99739 1.07917 0.80383 1.44925 1.16479 1.18572 1.15237 0.73202 1.24143 0.89873 1.06731 0.98151 1.24228 0.93432 0.92362 1.09745 1.21496 0.97303 1.02551 0.93739 1.21797 1.00891 0.94189 0.99433 1.21718 0.97199 0.94145 1.08748 1.22015 0.91132 0.91931 1.08816 1.24766 0.93148 0.92623 1.04852 1.86583 1.29440 1.88450 1.29901 0.93223 0.84161 0.74756 0.79777 0.89297 0.87086 0.85622 0.74827 0.94060 0.89143 0.91398 0.89046 0.84595 0.83525 0.85824 0.85649 0.85952 0.85586 0.85965 0.85558 0.88846 0.91389 0.88669 0.92152 0.80677 0.84213 0.75920 1.21931 1.21212 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -1.55 11.00 127.77 1.41 -0.14 16 2 N -0.26 4.82 3.70 -355.93 -1.32 3.50 16 3 N -0.26 4.39 11.67 -48.17 -0.56 3.83 16 4 C -0.04 0.57 7.13 42.46 0.30 0.87 16 5 C 0.60 -8.50 7.79 86.75 0.68 -7.82 16 6 O -0.57 3.35 16.59 -3.94 -0.07 3.29 16 7 N -0.70 16.73 4.23 -445.55 -1.88 14.85 16 8 C 0.14 -3.70 2.78 44.99 0.13 -3.58 16 9 H 0.06 -1.06 7.58 -2.39 -0.02 -1.08 16 10 C -0.13 4.23 5.60 30.60 0.17 4.40 16 11 C -0.12 5.60 4.78 30.59 0.15 5.75 16 12 C -0.11 5.42 2.07 -10.79 -0.02 5.39 16 13 H 0.12 -6.23 6.40 -2.39 -0.02 -6.25 16 14 C 0.00 -0.12 4.14 86.30 0.36 0.24 16 15 N -0.38 24.15 0.66 -948.87 -0.62 23.52 16 16 H 0.43 -28.37 6.53 -89.70 -0.59 -28.96 16 17 C -0.05 2.96 9.17 127.69 1.17 4.14 16 18 C -0.06 3.48 8.86 127.69 1.13 4.61 16 19 C -0.11 4.89 5.03 30.59 0.15 5.04 16 20 C -0.13 4.27 5.61 30.59 0.17 4.44 16 21 C -0.19 2.70 9.35 22.41 0.21 2.91 16 22 C -0.01 0.23 6.18 41.40 0.26 0.49 16 23 C -0.04 0.83 2.99 71.24 0.21 1.04 16 24 O -0.54 10.41 10.02 -148.98 -1.49 8.92 16 25 Si 0.78 -13.44 31.23 68.60 2.14 -11.30 16 26 H 0.09 -2.14 8.14 -2.39 -0.02 -2.16 16 27 H 0.11 -3.12 8.14 -2.39 -0.02 -3.14 16 28 H 0.13 -3.22 5.01 -2.39 -0.01 -3.23 16 29 H 0.41 -11.80 6.59 -92.70 -0.61 -12.41 16 30 H 0.04 -0.98 8.14 -2.39 -0.02 -1.00 16 31 H 0.09 -3.17 8.14 -2.39 -0.02 -3.19 16 32 H 0.07 -2.82 7.60 -2.39 -0.02 -2.84 16 33 H 0.09 -4.69 6.57 -2.39 -0.02 -4.70 16 34 H 0.14 -8.20 8.07 -2.39 -0.02 -8.22 16 35 H 0.15 -9.09 7.99 -2.39 -0.02 -9.11 16 36 H 0.12 -7.71 8.14 -2.39 -0.02 -7.73 16 37 H 0.13 -7.81 8.10 -2.38 -0.02 -7.83 16 38 H 0.12 -7.60 8.10 -2.39 -0.02 -7.62 16 39 H 0.13 -7.85 7.99 -2.38 -0.02 -7.87 16 40 H 0.12 -7.51 6.55 -2.39 -0.02 -7.53 16 41 H 0.13 -7.85 8.07 -2.39 -0.02 -7.87 16 42 H 0.09 -4.19 8.14 -2.39 -0.02 -4.20 16 43 H 0.07 -2.84 6.51 -2.38 -0.02 -2.85 16 44 H 0.09 -3.40 8.14 -2.39 -0.02 -3.42 16 45 H 0.06 -1.76 8.14 -2.39 -0.02 -1.78 16 46 H 0.18 -2.81 7.03 -2.91 -0.02 -2.83 16 47 H 0.14 -2.87 7.96 -2.39 -0.02 -2.89 16 48 H 0.39 -9.78 8.39 -74.06 -0.62 -10.40 16 49 H -0.29 2.81 7.11 99.48 0.71 3.52 16 50 H -0.29 3.54 7.11 99.48 0.71 4.25 16 Total: 1.00 -80.78 380.96 1.84 -78.94 By element: Atomic # 1 Polarization: -152.50 SS G_CDS: -0.82 Total: -153.33 kcal Atomic # 6 Polarization: 21.31 SS G_CDS: 6.47 Total: 27.78 kcal Atomic # 7 Polarization: 50.09 SS G_CDS: -4.39 Total: 45.70 kcal Atomic # 8 Polarization: 13.77 SS G_CDS: -1.56 Total: 12.21 kcal Atomic # 14 Polarization: -13.44 SS G_CDS: 2.14 Total: -11.30 kcal Total: -80.78 1.84 -78.94 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17509652_13259642.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 193.255 kcal (2) G-P(sol) polarization free energy of solvation -80.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 112.477 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.843 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -78.935 kcal (6) G-S(sol) free energy of system = (1) + (5) 114.320 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds