Wall clock time and date at job start Tue Mar 9 2021 13:51:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 N 1.28467 * 124.88523 * 2 1 4 4 C 1.31812 * 110.07082 * 179.97438 * 3 2 1 5 5 C 1.47716 * 126.51406 * 180.02562 * 4 3 2 6 6 O 1.21568 * 120.00100 * 179.97438 * 5 4 3 7 7 N 1.34778 * 120.00083 * 359.97438 * 5 4 3 8 8 C 1.46493 * 119.99810 * 180.02562 * 7 5 4 9 9 H 1.09001 * 112.85187 * 336.19392 * 8 7 5 10 10 C 1.53788 * 113.61608 * 107.50315 * 8 7 5 11 11 C 1.53779 * 87.07976 * 89.11314 * 10 8 7 12 12 H 1.08996 * 113.61827 * 270.88272 * 11 10 8 13 13 N 1.46502 * 113.61496 * 139.98363 * 11 10 8 14 14 C 1.35314 * 125.86422 * 347.21271 * 13 11 10 15 15 C 1.35356 * 106.17502 * 179.90795 * 14 13 11 16 16 N 1.33771 * 106.49168 * 0.35199 * 15 14 13 17 17 N 1.28630 * 108.88967 * 359.77747 * 16 15 14 18 18 C 1.53784 * 87.08321 * 25.43442 * 11 10 8 19 19 C 1.41500 * 106.96641 * 359.75302 * 4 3 2 20 20 C 1.35040 * 124.88572 * 179.97438 * 2 1 3 21 21 C 1.50700 * 126.38140 * 0.03354 * 20 2 1 22 22 O 1.42896 * 109.47341 * 330.00050 * 21 20 2 23 23 Si 1.86300 * 109.46849 * 209.99936 * 21 20 2 24 24 H 1.09002 * 109.47394 * 270.03620 * 1 2 3 25 25 H 1.08996 * 109.47073 * 30.04041 * 1 2 3 26 26 H 1.09008 * 109.47063 * 150.03939 * 1 2 3 27 27 H 0.96995 * 120.00014 * 359.97438 * 7 5 4 28 28 H 1.09000 * 113.61376 * 203.65938 * 10 8 7 29 29 H 1.09001 * 113.60995 * 334.56448 * 10 8 7 30 30 H 1.08000 * 126.91607 * 0.02562 * 14 13 11 31 31 H 1.07997 * 126.75226 * 180.13384 * 15 14 13 32 32 H 1.08999 * 113.61082 * 220.01884 * 18 11 10 33 33 H 1.09000 * 113.61440 * 89.11730 * 18 11 10 34 34 H 1.07995 * 127.24568 * 180.29985 * 19 4 3 35 35 H 1.09000 * 109.46989 * 90.00380 * 21 20 2 36 36 H 0.96693 * 114.00306 * 299.99773 * 22 21 20 37 37 H 1.48506 * 110.00048 * 58.68772 * 23 21 20 38 38 H 1.48502 * 109.99996 * 180.02562 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7168 0.0006 5 6 4.6273 1.6398 0.0013 6 8 5.7597 1.1977 0.0022 7 7 4.4241 2.9722 0.0009 8 6 5.5679 3.8875 0.0010 9 1 6.4724 3.4345 0.4069 10 6 5.7845 4.6030 -1.3429 11 6 4.8395 5.6987 -0.8223 12 1 3.7894 5.5129 -1.0474 13 7 5.2659 7.0561 -1.1715 14 6 6.4781 7.4049 -1.6614 15 6 6.4402 8.7458 -1.8420 16 7 5.2254 9.1474 -1.4515 17 7 4.5540 8.1226 -1.0598 18 6 5.2507 5.2696 0.5961 19 6 3.5271 -0.6972 0.0068 20 6 2.2373 -1.1077 0.0005 21 6 1.7533 -2.5349 0.0004 22 8 0.4951 -2.6113 0.6734 23 14 2.9941 -3.6114 0.8794 24 1 -0.3634 0.0006 1.0277 25 1 -0.3633 0.8896 -0.5144 26 1 -0.3633 -0.8904 -0.5133 27 1 3.5206 3.3250 -0.0002 28 1 6.8081 4.9454 -1.4952 29 1 5.3886 4.0551 -2.1980 30 1 7.3082 6.7457 -1.8685 31 1 7.2356 9.3693 -2.2228 32 1 4.4239 5.2599 1.3062 33 1 6.1283 5.7943 0.9738 34 1 4.4108 -1.3181 0.0134 35 1 1.6372 -2.8791 -1.0273 36 1 0.5236 -2.3198 1.5949 37 1 3.1851 -3.1329 2.2722 38 1 2.5288 -5.0216 0.8856 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17567748_13259642.mol2 38 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:51:19 Heat of formation + Delta-G solvation = 152.522604 kcal Electronic energy + Delta-G solvation = -24236.266129 eV Core-core repulsion = 20507.105739 eV Total energy + Delta-G solvation = -3729.160390 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 305.127 amu Computer time = 0.65 seconds Orbital eigenvalues (eV) -44.26270 -43.85480 -41.26372 -39.43166 -38.17002 -35.24369 -34.44285 -33.38682 -32.50296 -31.97749 -28.70743 -27.09839 -27.05979 -26.50275 -24.50896 -23.55391 -22.83373 -22.23266 -21.16482 -20.60830 -19.29143 -18.82841 -17.64616 -17.52663 -17.36913 -17.23493 -16.98681 -16.12026 -16.00161 -15.78384 -15.72871 -15.60703 -15.22215 -14.87461 -14.69061 -14.08475 -13.96184 -13.74188 -13.58309 -13.42922 -13.35511 -12.74207 -12.69393 -12.35495 -12.28259 -12.05164 -12.00107 -11.64521 -11.38248 -11.08577 -11.00277 -10.38549 -10.35000 -10.09186 -9.97985 -4.89097 0.41010 0.63273 0.81556 1.21674 1.41403 1.52861 1.61026 1.67460 1.92251 2.00832 2.25335 2.94276 3.08855 3.15735 3.28405 3.34152 3.49960 3.64164 3.69141 3.96246 4.16288 4.25935 4.28318 4.32276 4.34918 4.42243 4.44968 4.48320 4.52861 4.63841 4.67840 4.71602 4.75350 4.82432 4.86825 5.23701 5.26034 5.36502 5.65134 5.68776 6.26078 6.30307 6.78620 7.05213 7.51536 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.265 5.265 3 N -0.266 5.266 4 C -0.041 4.041 5 C 0.613 3.387 6 O -0.555 6.555 7 N -0.696 5.696 8 C 0.129 3.871 9 H 0.119 0.881 10 C -0.141 4.141 11 C 0.106 3.894 12 H 0.136 0.864 13 N -0.276 5.276 14 C -0.035 4.035 15 C -0.067 4.067 16 N -0.319 5.319 17 N -0.130 5.130 18 C -0.137 4.137 19 C -0.185 4.185 20 C -0.014 4.014 21 C -0.046 4.046 22 O -0.538 6.538 23 Si 0.785 3.215 24 H 0.099 0.901 25 H 0.101 0.899 26 H 0.116 0.884 27 H 0.415 0.585 28 H 0.129 0.871 29 H 0.093 0.907 30 H 0.232 0.768 31 H 0.213 0.787 32 H 0.095 0.905 33 H 0.114 0.886 34 H 0.184 0.816 35 H 0.145 0.855 36 H 0.388 0.612 37 H -0.294 1.294 38 H -0.287 1.287 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.267 -5.619 -0.825 5.686 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.104 5.104 4 C -0.199 4.199 5 C 0.398 3.602 6 O -0.431 6.431 7 N -0.348 5.348 8 C 0.023 3.977 9 H 0.137 0.863 10 C -0.181 4.181 11 C 0.005 3.995 12 H 0.154 0.846 13 N -0.070 5.070 14 C -0.186 4.186 15 C -0.225 4.225 16 N -0.183 5.183 17 N -0.108 5.108 18 C -0.177 4.177 19 C -0.213 4.213 20 C -0.139 4.139 21 C -0.156 4.156 22 O -0.346 6.346 23 Si 0.688 3.312 24 H 0.118 0.882 25 H 0.119 0.881 26 H 0.134 0.866 27 H 0.252 0.748 28 H 0.147 0.853 29 H 0.112 0.888 30 H 0.248 0.752 31 H 0.230 0.770 32 H 0.114 0.886 33 H 0.132 0.868 34 H 0.201 0.799 35 H 0.163 0.837 36 H 0.238 0.762 37 H -0.220 1.220 38 H -0.213 1.213 Dipole moment (debyes) X Y Z Total from point charges -1.247 -5.166 -0.305 5.323 hybrid contribution -0.043 -0.238 0.414 0.480 sum -1.290 -5.404 0.109 5.557 Atomic orbital electron populations 1.22600 0.70861 1.06687 1.05987 1.45676 1.08954 1.01971 1.48827 1.73463 1.02803 1.14791 1.19343 1.21807 0.90858 0.94493 1.12719 1.16922 0.86337 0.81812 0.75115 1.90806 1.23532 1.77578 1.51193 1.45483 1.10466 1.04645 1.74175 1.21637 0.90771 0.88688 0.96587 0.86310 1.23973 1.01377 0.93718 0.98992 1.23808 1.02363 0.74432 0.98864 0.84643 1.47752 1.10090 1.08952 1.40156 1.24267 0.91923 0.97964 1.04480 1.24248 0.97058 0.94801 1.06385 1.75083 1.06396 1.21866 1.14988 1.78266 1.21538 0.89235 1.21793 1.23789 1.04417 0.94428 0.95024 1.21734 0.97397 0.93532 1.08595 1.22187 0.91081 0.92021 1.08585 1.24863 0.93392 0.92174 1.05138 1.86583 1.29365 1.88579 1.30059 0.93258 0.83810 0.74671 0.79457 0.88219 0.88066 0.86578 0.74789 0.85293 0.88847 0.75175 0.76985 0.88617 0.86772 0.79905 0.83721 0.76205 1.22048 1.21333 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.61 10.12 127.77 1.29 0.69 16 2 N -0.26 0.39 3.70 -355.93 -1.32 -0.92 16 3 N -0.27 -0.46 11.67 -48.17 -0.56 -1.02 16 4 C -0.04 -0.13 7.13 42.46 0.30 0.17 16 5 C 0.61 2.20 7.83 86.75 0.68 2.87 16 6 O -0.56 -5.11 16.52 -3.93 -0.06 -5.17 16 7 N -0.70 1.90 5.26 -443.02 -2.33 -0.43 16 8 C 0.13 -0.75 4.32 45.52 0.20 -0.55 16 9 H 0.12 -0.47 7.46 -2.39 -0.02 -0.48 16 10 C -0.14 1.16 7.23 31.12 0.22 1.39 16 11 C 0.11 -0.54 4.84 45.52 0.22 -0.32 16 12 H 0.14 -0.75 8.14 -2.39 -0.02 -0.77 16 13 N -0.28 -0.38 3.53 -324.66 -1.15 -1.53 16 14 C -0.04 0.08 10.78 83.49 0.90 0.98 16 15 C -0.07 -0.19 12.06 83.73 1.01 0.82 16 16 N -0.32 -3.78 12.41 -58.25 -0.72 -4.50 16 17 N -0.13 -1.34 13.16 37.02 0.49 -0.86 16 18 C -0.14 0.94 7.63 31.12 0.24 1.18 16 19 C -0.18 -0.10 9.35 22.41 0.21 0.11 16 20 C -0.01 0.03 6.18 41.40 0.26 0.29 16 21 C -0.05 0.28 2.87 71.24 0.20 0.48 16 22 O -0.54 3.10 10.40 -148.98 -1.55 1.55 16 23 Si 0.78 -3.98 31.22 68.60 2.14 -1.84 16 24 H 0.10 -1.05 8.14 -2.39 -0.02 -1.07 16 25 H 0.10 -0.90 8.14 -2.39 -0.02 -0.92 16 26 H 0.12 -1.05 6.77 -2.38 -0.02 -1.07 16 27 H 0.42 -2.12 8.43 -92.71 -0.78 -2.90 16 28 H 0.13 -1.56 6.33 -2.39 -0.02 -1.58 16 29 H 0.09 -0.67 8.14 -2.39 -0.02 -0.69 16 30 H 0.23 -2.77 6.73 -2.91 -0.02 -2.79 16 31 H 0.21 -0.79 8.06 -2.91 -0.02 -0.82 16 32 H 0.10 -0.64 8.14 -2.39 -0.02 -0.66 16 33 H 0.11 -0.84 8.14 -2.39 -0.02 -0.86 16 34 H 0.18 -0.54 7.01 -2.91 -0.02 -0.56 16 35 H 0.15 -1.27 7.96 -2.39 -0.02 -1.29 16 36 H 0.39 -3.92 8.70 -74.06 -0.64 -4.56 16 37 H -0.29 -0.40 7.11 99.48 0.71 0.31 16 38 H -0.29 -0.35 7.11 99.48 0.71 0.36 16 Total: 0.00 -27.37 328.72 0.41 -26.96 By element: Atomic # 1 Polarization: -20.09 SS G_CDS: -0.26 Total: -20.35 kcal Atomic # 6 Polarization: 2.38 SS G_CDS: 5.73 Total: 8.11 kcal Atomic # 7 Polarization: -3.67 SS G_CDS: -5.59 Total: -9.26 kcal Atomic # 8 Polarization: -2.01 SS G_CDS: -1.61 Total: -3.62 kcal Atomic # 14 Polarization: -3.98 SS G_CDS: 2.14 Total: -1.84 kcal Total: -27.37 0.41 -26.96 kcal The number of atoms in the molecule is 38 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17567748_13259642.mol2 38 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.483 kcal (2) G-P(sol) polarization free energy of solvation -27.371 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 152.112 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.960 kcal (6) G-S(sol) free energy of system = (1) + (5) 152.523 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds