Wall clock time and date at job start Tue Mar 9 2021 13:53:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.33864 * 124.19297 * 2 1 4 4 O 1.21543 * 123.79115 * 0.03179 * 3 2 1 5 5 N 1.34668 * 112.41977 * 179.76467 * 3 2 1 6 6 C 1.46862 * 106.42757 * 0.22691 * 5 3 2 7 7 C 1.52461 * 110.48834 * 241.45833 * 6 5 3 8 8 C 1.53083 * 109.58419 * 178.66514 * 7 6 5 9 9 C 1.53011 * 109.41838 * 59.14377 * 8 7 6 10 10 N 1.46499 * 109.46522 * 179.51622 * 9 8 7 11 11 C 1.34778 * 120.00316 * 275.04319 * 10 9 8 12 12 O 1.21591 * 119.99717 * 359.97438 * 11 10 9 13 13 C 1.47571 * 120.00059 * 179.97438 * 11 10 9 14 14 C 1.36498 * 120.01168 * 179.72742 * 13 11 10 15 15 N 1.35940 * 120.50558 * 179.72083 * 14 13 11 16 16 C 1.37011 * 132.41435 * 180.20148 * 15 14 13 17 17 C 1.50695 * 126.42600 * 0.31304 * 16 15 14 18 18 O 1.42898 * 109.47639 * 330.00812 * 17 16 15 19 19 Si 1.86297 * 109.47005 * 210.00165 * 17 16 15 20 20 C 1.35004 * 107.14007 * 180.31988 * 16 15 14 21 21 N 1.33584 * 108.65955 * 359.97438 * 20 16 15 22 22 C 1.32416 * 109.22090 * 359.97438 * 21 20 16 23 23 C 1.41253 * 132.11197 * 180.02562 * 22 21 20 24 24 Br 1.89097 * 120.25659 * 359.97438 * 23 22 21 25 25 C 1.35704 * 119.48808 * 180.02562 * 23 22 21 26 26 C 1.52997 * 109.50933 * 299.53128 * 9 8 7 27 27 C 1.52477 * 110.48719 * 118.54255 * 6 5 3 28 28 C 1.34915 * 124.19445 * 180.18243 * 2 1 3 29 29 O 1.21231 * 127.25540 * 359.97438 * 28 2 1 30 30 H 1.08994 * 109.47505 * 0.02919 * 1 2 3 31 31 H 1.09004 * 109.46708 * 120.03202 * 1 2 3 32 32 H 1.09001 * 109.47423 * 240.02362 * 1 2 3 33 33 H 0.97002 * 126.79302 * 180.22541 * 5 3 2 34 34 H 1.09001 * 109.45356 * 298.69746 * 7 6 5 35 35 H 1.08995 * 109.45664 * 58.62910 * 7 6 5 36 36 H 1.09000 * 109.47786 * 299.16452 * 8 7 6 37 37 H 1.08993 * 109.48162 * 179.13373 * 8 7 6 38 38 H 1.09005 * 109.46270 * 59.54186 * 9 8 7 39 39 H 0.97004 * 119.99756 * 95.03680 * 10 9 8 40 40 H 1.07998 * 119.74491 * 359.97379 * 14 13 11 41 41 H 1.09003 * 109.46763 * 90.00498 * 17 16 15 42 42 H 0.96700 * 113.99494 * 300.00141 * 18 17 16 43 43 H 1.48502 * 109.99678 * 180.02562 * 19 17 16 44 44 H 1.48497 * 110.00144 * 301.32310 * 19 17 16 45 45 H 1.08004 * 125.66862 * 179.97438 * 20 16 15 46 46 H 1.08000 * 120.23064 * 180.02562 * 25 23 22 47 47 H 1.08992 * 109.48152 * 300.48271 * 26 9 8 48 48 H 1.09005 * 109.47720 * 180.45166 * 26 9 8 49 49 H 1.08997 * 109.45140 * 301.37437 * 27 6 5 50 50 H 1.09005 * 109.44254 * 61.29636 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2173 1.1073 0.0000 4 8 1.7617 2.2341 0.0006 5 7 3.5357 0.8325 0.0051 6 6 3.6548 -0.6313 0.0033 7 6 4.3730 -1.1098 1.2602 8 6 4.4564 -2.6383 1.2531 9 6 5.2126 -3.1007 0.0059 10 7 5.3031 -4.5629 0.0040 11 6 6.2958 -5.1777 0.6771 12 8 7.1167 -4.5186 1.2856 13 6 6.3865 -6.6506 0.6756 14 6 7.3951 -7.2732 1.3526 15 7 7.4849 -8.6296 1.3626 16 6 8.3721 -9.4927 1.9502 17 6 9.5563 -9.1156 2.8024 18 8 10.0565 -7.8431 2.3869 19 14 10.8922 -10.4001 2.6124 20 6 7.9862 -10.7441 1.6223 21 7 6.8946 -10.6679 0.8561 22 6 6.5702 -9.3956 0.6849 23 6 5.5206 -8.7731 -0.0265 24 35 4.2552 -9.8182 -0.9658 25 6 5.4278 -7.4193 -0.0315 26 6 4.4670 -2.6343 -1.2460 27 6 4.3836 -1.1058 -1.2491 28 6 2.2233 -1.1159 -0.0036 29 8 1.8376 -2.2652 -0.0068 30 1 -0.3634 1.0276 -0.0005 31 1 -0.3633 -0.5144 -0.8898 32 1 -0.3634 -0.5135 0.8902 33 1 4.2629 1.4744 0.0092 34 1 5.3793 -0.6915 1.2848 35 1 3.8218 -0.7804 2.1409 36 1 3.4501 -3.0571 1.2441 37 1 4.9835 -2.9777 2.1446 38 1 6.2160 -2.6749 0.0109 39 1 4.6483 -5.0887 -0.4817 40 1 8.1249 -6.6838 1.8877 41 1 9.2498 -9.0620 3.8471 42 1 10.3482 -7.8171 1.4654 43 1 12.0655 -10.0401 3.4485 44 1 10.3749 -11.7337 3.0112 45 1 8.4783 -11.6555 1.9286 46 1 4.6299 -6.9309 -0.5710 47 1 3.4608 -3.0532 -1.2470 48 1 5.0019 -2.9709 -2.1341 49 1 3.8398 -0.7736 -2.1334 50 1 5.3900 -0.6873 -1.2638 There are 76 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 76 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17849352_12335884.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:53:42 Heat of formation + Delta-G solvation = 1.550182 kcal Electronic energy + Delta-G solvation = -40429.542265 eV Core-core repulsion = 35086.325085 eV Total energy + Delta-G solvation = -5343.217181 eV No. of doubly occupied orbitals = 76 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 478.073 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -44.26787 -43.84123 -41.32795 -40.09482 -38.95171 -38.37105 -37.97265 -37.24509 -36.06239 -35.30410 -34.19786 -32.55660 -32.09502 -31.81742 -30.27516 -29.66475 -28.96789 -26.88817 -25.91012 -24.80280 -24.14433 -24.02951 -23.13154 -22.60384 -22.44229 -21.67980 -20.64534 -19.47898 -19.13852 -18.77668 -18.20597 -18.02959 -17.76612 -17.54331 -17.52892 -17.09921 -16.65077 -16.54253 -16.31806 -16.18809 -16.01467 -15.85426 -15.70410 -15.58227 -15.25069 -15.03392 -14.95810 -14.69209 -14.32579 -14.22313 -14.05341 -13.82409 -13.69363 -13.53997 -13.40924 -13.39822 -13.32417 -13.01734 -12.85891 -12.67462 -12.26799 -12.20286 -12.14672 -11.96882 -11.79339 -11.53003 -11.34426 -11.32686 -11.22099 -10.92493 -10.88545 -10.87713 -10.49731 -10.23389 -10.00396 -9.08488 -4.95024 -0.88622 -0.36729 0.20792 0.47543 0.97615 1.12878 1.15365 1.42380 1.66962 1.79725 1.84939 1.92343 2.00893 2.07781 2.25715 2.79314 2.80989 3.08229 3.18351 3.35189 3.42738 3.43117 3.47908 3.49129 3.74287 3.85339 3.93803 3.99096 4.12309 4.14167 4.20609 4.25077 4.34899 4.37128 4.39626 4.41863 4.44211 4.49697 4.53571 4.56653 4.60966 4.72597 4.82929 4.93139 4.96916 5.01977 5.06765 5.19390 5.21070 5.26543 5.42391 5.57866 5.74923 5.91931 6.29633 6.35546 6.43268 6.51845 7.00770 7.01208 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.585 5.585 3 C 0.698 3.302 4 O -0.582 6.582 5 N -0.701 5.701 6 C 0.127 3.873 7 C -0.105 4.105 8 C -0.134 4.134 9 C 0.151 3.849 10 N -0.703 5.703 11 C 0.581 3.419 12 O -0.558 6.558 13 C -0.169 4.169 14 C 0.161 3.839 15 N -0.356 5.356 16 C -0.080 4.080 17 C -0.042 4.042 18 O -0.552 6.552 19 Si 0.804 3.196 20 C 0.034 3.966 21 N -0.495 5.495 22 C 0.227 3.773 23 C -0.082 4.082 24 Br 0.003 6.997 25 C -0.023 4.023 26 C -0.129 4.129 27 C -0.105 4.105 28 C 0.528 3.472 29 O -0.469 6.469 30 H 0.093 0.907 31 H 0.090 0.910 32 H 0.086 0.914 33 H 0.452 0.548 34 H 0.110 0.890 35 H 0.072 0.928 36 H 0.074 0.926 37 H 0.067 0.933 38 H 0.095 0.905 39 H 0.413 0.587 40 H 0.196 0.804 41 H 0.120 0.880 42 H 0.396 0.604 43 H -0.287 1.287 44 H -0.268 1.268 45 H 0.207 0.793 46 H 0.183 0.817 47 H 0.081 0.919 48 H 0.100 0.900 49 H 0.084 0.916 50 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.139 0.775 -3.934 5.092 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.331 5.331 3 C 0.399 3.601 4 O -0.458 6.458 5 N -0.366 5.366 6 C 0.037 3.963 7 C -0.144 4.144 8 C -0.173 4.173 9 C 0.047 3.953 10 N -0.354 5.354 11 C 0.368 3.632 12 O -0.438 6.438 13 C -0.176 4.176 14 C 0.035 3.965 15 N -0.029 5.029 16 C -0.191 4.191 17 C -0.151 4.151 18 O -0.360 6.360 19 Si 0.705 3.295 20 C -0.115 4.115 21 N -0.214 5.214 22 C -0.018 4.018 23 C -0.164 4.164 24 Br 0.088 6.912 25 C -0.049 4.049 26 C -0.168 4.168 27 C -0.144 4.144 28 C 0.315 3.685 29 O -0.339 6.339 30 H 0.112 0.888 31 H 0.108 0.892 32 H 0.105 0.895 33 H 0.300 0.700 34 H 0.128 0.872 35 H 0.091 0.909 36 H 0.093 0.907 37 H 0.085 0.915 38 H 0.113 0.887 39 H 0.251 0.749 40 H 0.213 0.787 41 H 0.137 0.863 42 H 0.246 0.754 43 H -0.213 1.213 44 H -0.194 1.194 45 H 0.223 0.777 46 H 0.201 0.799 47 H 0.099 0.901 48 H 0.119 0.881 49 H 0.103 0.897 50 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges 2.644 -0.338 -3.143 4.121 hybrid contribution -0.318 1.105 0.958 1.496 sum 2.326 0.767 -2.184 3.282 Atomic orbital electron populations 1.22027 0.74263 1.05333 1.04599 1.46466 1.10382 1.07984 1.68294 1.16104 0.83111 0.83735 0.77172 1.91020 1.76053 1.21882 1.56853 1.45543 1.05824 1.07587 1.77599 1.21234 0.93364 0.80834 1.00904 1.21600 1.02522 0.96041 0.94206 1.21988 1.01923 0.94623 0.98783 1.21051 1.00663 0.78590 0.94972 1.45784 1.29508 1.08134 1.52010 1.17474 0.81312 0.85617 0.78839 1.90846 1.41964 1.66452 1.44531 1.19299 0.98484 0.94506 1.05346 1.22283 0.98153 0.81105 0.94996 1.42709 1.20421 1.05972 1.33785 1.22347 0.98916 0.89543 1.08339 1.25142 0.96207 0.95709 0.98092 1.86482 1.83625 1.30679 1.35169 0.93084 0.74355 0.73183 0.88868 1.22839 0.94281 0.97199 0.97196 1.70825 1.15754 1.15033 1.19751 1.20688 0.93891 0.87398 0.99838 1.20558 0.96975 0.94403 1.04465 1.96843 1.51349 1.70971 1.72023 1.21372 0.97798 0.90452 0.95266 1.21894 1.02388 0.94787 0.97688 1.21648 1.02736 0.95991 0.94012 1.21006 0.88888 0.84558 0.74013 1.90754 1.79403 1.17962 1.45808 0.88835 0.89170 0.89533 0.70041 0.87190 0.90913 0.90729 0.91470 0.88704 0.74880 0.78733 0.86302 0.75382 1.21341 1.19405 0.77655 0.79948 0.90073 0.88133 0.89699 0.86765 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.18 10.89 127.77 1.39 1.21 16 2 N -0.58 -0.19 3.01 -796.76 -2.40 -2.59 16 3 C 0.70 1.74 8.63 179.37 1.55 3.29 16 4 O -0.58 -6.23 17.24 -3.85 -0.07 -6.30 16 5 N -0.70 3.69 5.88 -442.69 -2.60 1.09 16 6 C 0.13 -0.84 1.01 2.58 0.00 -0.83 16 7 C -0.10 0.74 5.10 30.44 0.16 0.89 16 8 C -0.13 0.62 5.25 30.63 0.16 0.78 16 9 C 0.15 -1.05 2.44 44.99 0.11 -0.94 16 10 N -0.70 4.57 5.03 -445.64 -2.24 2.33 16 11 C 0.58 -0.70 7.73 86.71 0.67 -0.03 16 12 O -0.56 -2.94 15.94 -4.00 -0.06 -3.00 16 13 C -0.17 0.29 5.84 -20.35 -0.12 0.17 16 14 C 0.16 0.03 9.91 83.65 0.83 0.86 16 15 N -0.36 -0.81 2.93 -337.71 -0.99 -1.80 16 16 C -0.08 -0.03 6.24 41.00 0.26 0.23 16 17 C -0.04 0.14 3.06 71.23 0.22 0.36 16 18 O -0.55 1.86 10.89 -148.98 -1.62 0.23 16 19 Si 0.80 -4.75 31.34 68.60 2.15 -2.60 16 20 C 0.03 0.08 10.44 83.68 0.87 0.95 16 21 N -0.49 -3.83 11.30 -194.10 -2.19 -6.02 16 22 C 0.23 1.24 7.59 134.19 1.02 2.26 16 23 C -0.08 -0.16 6.24 22.42 0.14 -0.02 16 24 Br 0.00 0.01 33.72 -20.37 -0.69 -0.68 16 25 C -0.02 0.08 9.26 22.55 0.21 0.29 16 26 C -0.13 1.28 5.14 30.62 0.16 1.43 16 27 C -0.11 1.09 5.10 30.45 0.16 1.25 16 28 C 0.53 -0.71 6.53 87.78 0.57 -0.14 16 29 O -0.47 -0.75 13.94 -2.88 -0.04 -0.79 16 30 H 0.09 -0.11 7.45 -2.39 -0.02 -0.13 16 31 H 0.09 -0.42 8.14 -2.38 -0.02 -0.44 16 32 H 0.09 -0.35 8.14 -2.39 -0.02 -0.36 16 33 H 0.45 -4.33 8.96 -92.71 -0.83 -5.16 16 34 H 0.11 -1.13 8.14 -2.39 -0.02 -1.15 16 35 H 0.07 -0.38 8.14 -2.39 -0.02 -0.40 16 36 H 0.07 -0.15 6.11 -2.39 -0.01 -0.16 16 37 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 38 H 0.09 -0.56 7.58 -2.38 -0.02 -0.57 16 39 H 0.41 -4.46 6.64 -92.71 -0.62 -5.07 16 40 H 0.20 0.00 6.18 -2.91 -0.02 -0.02 16 41 H 0.12 -0.33 7.96 -2.39 -0.02 -0.35 16 42 H 0.40 -4.06 8.70 -74.06 -0.64 -4.71 16 43 H -0.29 -0.25 7.11 99.48 0.71 0.46 16 44 H -0.27 0.68 6.80 99.48 0.68 1.36 16 45 H 0.21 -0.54 6.70 -2.91 -0.02 -0.56 16 46 H 0.18 -1.85 6.44 -2.91 -0.02 -1.87 16 47 H 0.08 -0.59 6.11 -2.39 -0.01 -0.61 16 48 H 0.10 -1.24 8.14 -2.38 -0.02 -1.26 16 49 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 50 H 0.11 -1.61 8.14 -2.38 -0.02 -1.63 16 Total: 0.00 -28.29 425.48 -3.41 -31.70 By element: Atomic # 1 Polarization: -22.59 SS G_CDS: -1.00 Total: -23.59 kcal Atomic # 6 Polarization: 3.67 SS G_CDS: 8.35 Total: 12.02 kcal Atomic # 7 Polarization: 3.43 SS G_CDS: -10.43 Total: -6.99 kcal Atomic # 8 Polarization: -8.06 SS G_CDS: -1.79 Total: -9.86 kcal Atomic # 14 Polarization: -4.75 SS G_CDS: 2.15 Total: -2.60 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -0.69 Total: -0.68 kcal Total: -28.29 -3.41 -31.70 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17849352_12335884.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 33.251 kcal (2) G-P(sol) polarization free energy of solvation -28.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 4.963 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.413 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.700 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.550 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds