Wall clock time and date at job start Tue Mar 9 2021 13:58:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.36769 * 125.80291 * 2 1 4 4 C 1.47263 * 126.94165 * 0.02562 * 3 2 1 5 5 O 1.21629 * 120.00126 * 359.97438 * 4 3 2 6 6 N 1.34773 * 119.99813 * 180.02562 * 4 3 2 7 7 C 1.46499 * 120.00031 * 179.97438 * 6 4 3 8 8 C 1.52997 * 109.47695 * 204.99801 * 7 6 4 9 9 C 1.52997 * 109.47457 * 179.97438 * 8 7 6 10 10 C 1.53002 * 109.46817 * 60.00169 * 9 8 7 11 11 C 1.52996 * 109.47346 * 299.99737 * 10 9 8 12 12 C 1.53002 * 109.46891 * 59.99997 * 11 10 9 13 13 C 1.52997 * 109.46978 * 60.00410 * 12 11 10 14 14 C 1.53006 * 109.47164 * 299.99874 * 13 12 11 15 15 O 1.42895 * 109.47000 * 180.02562 * 14 13 12 16 16 C 1.52997 * 109.47127 * 59.99836 * 14 13 12 17 17 C 1.52999 * 109.46623 * 299.99900 * 14 13 12 18 18 C 1.46689 * 106.11423 * 180.28025 * 3 2 1 19 19 C 1.34487 * 106.33460 * 359.56902 * 18 3 2 20 20 C 1.50699 * 125.57303 * 180.14919 * 19 18 3 21 21 O 1.42891 * 109.47252 * 65.30836 * 20 19 18 22 22 Si 1.86299 * 109.47027 * 185.31071 * 20 19 18 23 23 N 1.34656 * 125.79889 * 180.02562 * 2 1 3 24 24 H 1.09009 * 109.46907 * 89.99896 * 1 2 3 25 25 H 1.09001 * 109.47478 * 209.99806 * 1 2 3 26 26 H 1.08995 * 109.47199 * 330.00524 * 1 2 3 27 27 H 0.96998 * 120.00452 * 359.97438 * 6 4 3 28 28 H 1.09004 * 109.47041 * 324.99924 * 7 6 4 29 29 H 1.09001 * 109.46989 * 59.99548 * 8 7 6 30 30 H 1.08993 * 109.47194 * 299.99651 * 9 8 7 31 31 H 1.09002 * 109.46695 * 179.97438 * 9 8 7 32 32 H 1.09004 * 109.46733 * 179.97438 * 10 9 8 33 33 H 1.08992 * 109.47554 * 180.02562 * 11 10 9 34 34 H 1.09004 * 109.47108 * 300.00289 * 11 10 9 35 35 H 1.09002 * 109.47097 * 180.02562 * 12 11 10 36 36 H 1.09001 * 109.47375 * 59.99908 * 13 12 11 37 37 H 1.09000 * 109.47140 * 179.97438 * 13 12 11 38 38 H 0.96696 * 114.00485 * 299.99339 * 15 14 13 39 39 H 1.09002 * 109.47153 * 180.02562 * 16 14 13 40 40 H 1.09001 * 109.46832 * 60.00321 * 16 14 13 41 41 H 1.09000 * 109.47486 * 299.99829 * 17 14 13 42 42 H 1.09002 * 109.46716 * 179.97438 * 17 14 13 43 43 H 1.07998 * 126.83379 * 179.73486 * 18 3 2 44 44 H 1.08998 * 109.46639 * 305.30680 * 20 19 18 45 45 H 0.96699 * 113.99933 * 59.99981 * 21 20 19 46 46 H 1.48503 * 109.99922 * 179.97438 * 22 20 19 47 47 H 1.48498 * 110.00032 * 301.31529 * 22 20 19 48 48 H 0.97006 * 124.85568 * 359.96193 * 23 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3071 1.1092 0.0000 4 6 1.8702 2.5156 0.0005 5 8 0.6839 2.7839 0.0006 6 7 2.7850 3.5053 -0.0001 7 6 2.3505 4.9044 -0.0001 8 6 3.4474 5.7792 -0.6103 9 6 2.9933 7.2402 -0.6109 10 6 2.7222 7.6905 0.8260 11 6 1.6252 6.8159 1.4362 12 6 2.0793 5.3548 1.4368 13 6 3.3592 5.2188 2.2640 14 6 4.4562 6.0936 1.6538 15 8 5.6517 5.9662 2.4260 16 6 4.0021 7.5547 1.6531 17 6 4.7273 5.6432 0.2169 18 6 3.6882 0.6150 -0.0069 19 6 3.6095 -0.7275 -0.0007 20 6 4.7819 -1.6744 -0.0011 21 8 5.5108 -1.5305 1.2194 22 14 4.1655 -3.4258 -0.1537 23 7 2.2946 -1.0922 -0.0005 24 1 -0.3633 0.0000 -1.0278 25 1 -0.3634 -0.8900 0.5138 26 1 -0.3633 0.8900 0.5137 27 1 3.7311 3.2914 -0.0005 28 1 1.4385 5.0016 -0.5892 29 1 3.6403 5.4586 -1.6341 30 1 2.0816 7.3371 -1.2003 31 1 3.7750 7.8634 -1.0453 32 1 2.3991 8.7316 0.8256 33 1 1.4318 7.1369 2.4597 34 1 0.7134 6.9127 0.8469 35 1 1.2976 4.7315 1.8711 36 1 3.1660 5.5396 3.2876 37 1 3.6825 4.1779 2.2647 38 1 5.5538 6.2345 3.3498 39 1 4.7834 8.1778 1.2180 40 1 3.8090 7.8755 2.6768 41 1 5.0508 4.6023 0.2173 42 1 5.5085 6.2667 -0.2180 43 1 4.5890 1.2108 -0.0128 44 1 5.4344 -1.4442 -0.8434 45 1 4.9912 -1.7202 2.0125 46 1 5.3122 -4.3694 -0.1559 47 1 3.2495 -3.7417 0.9716 48 1 1.9733 -2.0074 -0.0004 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_17849786_9865296.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:58:29 Heat of formation + Delta-G solvation = -87.217714 kcal Electronic energy + Delta-G solvation = -30654.500910 eV Core-core repulsion = 26675.116954 eV Total energy + Delta-G solvation = -3979.383956 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.177 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -42.86776 -42.40684 -39.91776 -37.92622 -37.45658 -35.66185 -33.74330 -32.86334 -32.79296 -31.98696 -31.20980 -28.94964 -26.97671 -26.92278 -25.38991 -23.61391 -22.82141 -22.33000 -22.03536 -21.47155 -20.54689 -18.76985 -18.72106 -18.03143 -17.76003 -16.98547 -16.72949 -16.62929 -16.02403 -15.88910 -15.58193 -15.40276 -15.36131 -15.05929 -14.83236 -14.72183 -14.55111 -14.41696 -14.18164 -13.98369 -13.85847 -13.63261 -13.51310 -13.37464 -13.34480 -13.02309 -12.77659 -12.63270 -12.15534 -12.13330 -12.02922 -11.92193 -11.87464 -11.56806 -11.22303 -10.99242 -10.76450 -10.62667 -10.43240 -10.07153 -9.80018 -9.18143 -5.06076 0.69313 1.11308 1.25122 1.44086 1.80459 2.02953 2.40015 2.52502 3.12386 3.31819 3.43841 3.48215 3.65222 3.80352 3.85802 3.90532 3.98234 4.05613 4.13449 4.16569 4.19884 4.21450 4.25327 4.28702 4.32141 4.49234 4.52805 4.58676 4.68251 4.70424 4.71748 4.72199 4.75578 4.94325 4.98885 5.00371 5.01994 5.03910 5.06983 5.10792 5.16883 5.22801 5.30848 5.39896 5.42102 5.48098 5.59591 5.66906 5.83915 6.37977 6.43134 6.63706 6.83427 7.34496 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.096 4.096 2 C 0.120 3.880 3 C -0.266 4.266 4 C 0.588 3.412 5 O -0.583 6.583 6 N -0.712 5.712 7 C 0.159 3.841 8 C -0.083 4.083 9 C -0.109 4.109 10 C -0.083 4.083 11 C -0.108 4.108 12 C -0.088 4.088 13 C -0.129 4.129 14 C 0.137 3.863 15 O -0.577 6.577 16 C -0.134 4.134 17 C -0.100 4.100 18 C -0.139 4.139 19 C -0.019 4.019 20 C -0.050 4.050 21 O -0.541 6.541 22 Si 0.758 3.242 23 N -0.534 5.534 24 H 0.088 0.912 25 H 0.088 0.912 26 H 0.080 0.920 27 H 0.405 0.595 28 H 0.075 0.925 29 H 0.090 0.910 30 H 0.073 0.927 31 H 0.080 0.920 32 H 0.087 0.913 33 H 0.070 0.930 34 H 0.067 0.933 35 H 0.055 0.945 36 H 0.068 0.932 37 H 0.057 0.943 38 H 0.388 0.612 39 H 0.071 0.929 40 H 0.071 0.929 41 H 0.064 0.936 42 H 0.075 0.925 43 H 0.151 0.849 44 H 0.139 0.861 45 H 0.386 0.614 46 H -0.293 1.293 47 H -0.273 1.273 48 H 0.426 0.574 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.287 -1.230 -1.508 1.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.153 4.153 2 C 0.000 4.000 3 C -0.275 4.275 4 C 0.378 3.622 5 O -0.465 6.465 6 N -0.362 5.362 7 C 0.055 3.945 8 C -0.102 4.102 9 C -0.147 4.147 10 C -0.101 4.101 11 C -0.146 4.146 12 C -0.108 4.108 13 C -0.167 4.167 14 C 0.097 3.903 15 O -0.385 6.385 16 C -0.172 4.172 17 C -0.137 4.137 18 C -0.163 4.163 19 C -0.128 4.128 20 C -0.160 4.160 21 O -0.349 6.349 22 Si 0.661 3.339 23 N -0.135 5.135 24 H 0.106 0.894 25 H 0.107 0.893 26 H 0.099 0.901 27 H 0.242 0.758 28 H 0.093 0.907 29 H 0.108 0.892 30 H 0.092 0.908 31 H 0.098 0.902 32 H 0.105 0.895 33 H 0.089 0.911 34 H 0.085 0.915 35 H 0.073 0.927 36 H 0.087 0.913 37 H 0.076 0.924 38 H 0.238 0.762 39 H 0.090 0.910 40 H 0.090 0.910 41 H 0.083 0.917 42 H 0.094 0.906 43 H 0.169 0.831 44 H 0.157 0.843 45 H 0.236 0.764 46 H -0.220 1.220 47 H -0.199 1.199 48 H 0.267 0.733 Dipole moment (debyes) X Y Z Total from point charges -0.427 -2.024 -2.118 2.960 hybrid contribution 0.282 0.015 1.889 1.910 sum -0.145 -2.008 -0.229 2.027 Atomic orbital electron populations 1.20614 0.85972 1.04457 1.04266 1.20559 0.94307 0.85515 0.99608 1.20218 0.94073 0.91870 1.21380 1.17592 0.85039 0.84884 0.74658 1.90718 1.17874 1.84942 1.52990 1.45831 1.09889 1.05439 1.75069 1.20887 0.97843 0.79793 0.95997 1.21288 0.93322 0.96013 0.99561 1.21583 1.02339 0.94144 0.96588 1.21062 0.94366 1.00039 0.94655 1.21555 0.98290 0.93038 1.01684 1.21309 0.96857 0.97270 0.95353 1.22100 0.95082 1.00182 0.99361 1.21072 0.83651 0.94122 0.91472 1.86514 1.35302 1.89823 1.26864 1.22176 0.97893 0.95964 1.01165 1.21439 0.97570 1.01797 0.92942 1.21930 0.95364 0.93294 1.05757 1.20595 0.84727 0.95437 1.12028 1.24682 0.93149 1.07815 0.90312 1.86633 1.41022 1.91092 1.16114 0.94518 0.80417 0.71689 0.87246 1.41695 1.05189 1.08791 1.57815 0.89375 0.89289 0.90100 0.75779 0.90729 0.89185 0.90810 0.90170 0.89519 0.91146 0.91463 0.92697 0.91325 0.92377 0.76226 0.91044 0.91022 0.91702 0.90609 0.83098 0.84347 0.76435 1.21970 1.19932 0.73252 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.10 -0.03 9.88 71.23 0.70 0.67 16 2 C 0.12 0.29 7.17 41.78 0.30 0.59 16 3 C -0.27 -1.49 6.29 -19.04 -0.12 -1.61 16 4 C 0.59 5.09 7.77 86.62 0.67 5.76 16 5 O -0.58 -8.45 14.47 -4.12 -0.06 -8.51 16 6 N -0.71 -2.64 4.23 -445.95 -1.89 -4.53 16 7 C 0.16 0.45 2.05 44.99 0.09 0.54 16 8 C -0.08 0.08 2.88 -10.79 -0.03 0.05 16 9 C -0.11 0.27 5.19 30.59 0.16 0.43 16 10 C -0.08 0.18 3.19 -10.79 -0.03 0.15 16 11 C -0.11 0.01 5.19 30.59 0.16 0.17 16 12 C -0.09 -0.25 2.88 -10.79 -0.03 -0.28 16 13 C -0.13 -0.20 4.66 30.60 0.14 -0.06 16 14 C 0.14 0.05 1.15 -10.79 -0.01 0.04 16 15 O -0.58 -1.31 12.98 -148.98 -1.93 -3.24 16 16 C -0.13 0.22 4.82 30.59 0.15 0.37 16 17 C -0.10 -0.01 4.67 30.60 0.14 0.14 16 18 C -0.14 -0.30 10.45 23.62 0.25 -0.06 16 19 C -0.02 0.02 6.09 40.98 0.25 0.27 16 20 C -0.05 0.16 2.98 71.24 0.21 0.38 16 21 O -0.54 -0.21 12.88 -148.98 -1.92 -2.13 16 22 Si 0.76 -4.25 30.96 68.60 2.12 -2.13 16 23 N -0.53 1.31 5.41 -171.07 -0.93 0.39 16 24 H 0.09 -0.08 8.14 -2.38 -0.02 -0.10 16 25 H 0.09 -0.42 8.14 -2.39 -0.02 -0.44 16 26 H 0.08 0.46 6.46 -2.39 -0.02 0.45 16 27 H 0.41 0.37 5.99 -92.71 -0.56 -0.18 16 28 H 0.07 0.49 7.58 -2.38 -0.02 0.47 16 29 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 30 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 31 H 0.08 -0.30 8.14 -2.39 -0.02 -0.32 16 32 H 0.09 -0.31 8.14 -2.39 -0.02 -0.33 16 33 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 34 H 0.07 0.04 8.14 -2.38 -0.02 0.02 16 35 H 0.05 0.43 8.14 -2.39 -0.02 0.41 16 36 H 0.07 0.04 8.14 -2.39 -0.02 0.02 16 37 H 0.06 0.24 7.61 -2.39 -0.02 0.22 16 38 H 0.39 -1.62 9.05 -74.06 -0.67 -2.29 16 39 H 0.07 -0.08 8.14 -2.39 -0.02 -0.10 16 40 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 41 H 0.06 0.03 6.51 -2.39 -0.02 0.02 16 42 H 0.08 0.03 8.14 -2.39 -0.02 0.01 16 43 H 0.15 0.02 7.70 -2.91 -0.02 -0.01 16 44 H 0.14 -0.71 7.96 -2.39 -0.02 -0.73 16 45 H 0.39 -1.83 8.70 -74.06 -0.64 -2.47 16 46 H -0.29 -0.74 7.11 99.48 0.71 -0.04 16 47 H -0.27 0.75 7.11 99.48 0.71 1.46 16 48 H 0.43 -3.38 6.72 -92.70 -0.62 -4.00 16 Total: 0.00 -18.17 362.58 -3.04 -21.21 By element: Atomic # 1 Polarization: -7.17 SS G_CDS: -1.44 Total: -8.61 kcal Atomic # 6 Polarization: 4.55 SS G_CDS: 3.00 Total: 7.55 kcal Atomic # 7 Polarization: -1.33 SS G_CDS: -2.81 Total: -4.14 kcal Atomic # 8 Polarization: -9.97 SS G_CDS: -3.91 Total: -13.88 kcal Atomic # 14 Polarization: -4.25 SS G_CDS: 2.12 Total: -2.13 kcal Total: -18.17 -3.04 -21.21 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_17849786_9865296.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.007 kcal (2) G-P(sol) polarization free energy of solvation -18.169 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.177 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -3.041 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.210 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds