Wall clock time and date at job start Tue Mar 9 2021 12:52:23 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 S 1.81401 * 1 3 3 C 1.81406 * 102.99666 * 2 1 4 4 H 1.09000 * 112.84906 * 43.80032 * 3 2 1 5 5 C 1.53780 * 113.61268 * 174.99819 * 3 2 1 6 6 C 1.53787 * 87.08091 * 140.06142 * 5 3 2 7 7 H 1.09002 * 113.61122 * 89.19824 * 6 5 3 8 8 C 1.52996 * 113.61637 * 220.01549 * 6 5 3 9 9 N 1.46496 * 109.47038 * 185.00071 * 8 6 5 10 10 C 1.34778 * 119.99865 * 180.02562 * 9 8 6 11 11 O 1.21571 * 119.99901 * 359.97438 * 10 9 8 12 12 C 1.47710 * 119.99944 * 180.02562 * 10 9 8 13 13 N 1.31811 * 126.52146 * 359.97151 * 12 10 9 14 14 N 1.28465 * 110.07556 * 180.02562 * 13 12 10 15 15 C 1.46499 * 124.88399 * 179.97438 * 14 13 12 16 16 C 1.35034 * 110.22852 * 0.22725 * 14 13 12 17 17 C 1.50703 * 126.38041 * 179.75781 * 16 14 13 18 18 O 1.42899 * 109.47543 * 329.99882 * 17 16 14 19 19 Si 1.86303 * 109.46896 * 209.99944 * 17 16 14 20 20 C 1.35368 * 107.23277 * 359.63286 * 16 14 13 21 21 C 1.53779 * 87.08132 * 334.56682 * 6 5 3 22 22 H 1.09006 * 109.47320 * 60.00455 * 1 2 3 23 23 H 1.08997 * 109.47142 * 179.97438 * 1 2 3 24 24 H 1.09002 * 109.47692 * 300.00437 * 1 2 3 25 25 H 1.08996 * 113.61369 * 25.51795 * 5 3 2 26 26 H 1.08998 * 113.61469 * 254.60903 * 5 3 2 27 27 H 1.09000 * 109.47011 * 65.00253 * 8 6 5 28 28 H 1.08997 * 109.47240 * 305.00373 * 8 6 5 29 29 H 0.96997 * 120.00665 * 0.02562 * 9 8 6 30 30 H 1.09002 * 109.47391 * 90.01884 * 15 14 13 31 31 H 1.09001 * 109.46813 * 330.01941 * 15 14 13 32 32 H 1.09004 * 109.47041 * 210.02068 * 15 14 13 33 33 H 1.09001 * 109.47189 * 90.00465 * 17 16 14 34 34 H 0.96703 * 113.99773 * 300.00203 * 18 17 16 35 35 H 1.48496 * 110.00147 * 180.02562 * 19 17 16 36 36 H 1.48506 * 109.99779 * 301.32068 * 19 17 16 37 37 H 1.07991 * 127.24749 * 180.16245 * 20 16 14 38 38 H 1.08997 * 113.61355 * 139.97780 * 21 6 5 39 39 H 1.08999 * 113.61473 * 270.88348 * 21 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 16 1.8140 0.0000 0.0000 3 6 2.2220 1.7676 0.0000 4 1 1.6108 2.3430 0.6952 5 6 3.7282 2.0521 0.1229 6 6 3.5201 3.1753 -0.9068 7 1 3.2652 4.1360 -0.4593 8 6 4.6471 3.2798 -1.9361 9 7 4.4190 4.4456 -2.7934 10 6 5.2900 4.7377 -3.7795 11 8 6.2653 4.0339 -3.9573 12 6 5.0603 5.9135 -4.6435 13 7 4.0525 6.7594 -4.5655 14 7 4.1647 7.6638 -5.4709 15 6 3.2209 8.7653 -5.6764 16 6 5.2748 7.4500 -6.2093 17 6 5.7524 8.2867 -7.3682 18 8 4.6285 8.8740 -8.0269 19 14 6.6833 7.2095 -8.5698 20 6 5.8802 6.3457 -5.7129 21 6 2.3003 2.3836 -1.4069 22 1 -0.3634 0.5138 -0.8901 23 1 -0.3633 -1.0276 -0.0005 24 1 -0.3634 0.5139 0.8899 25 1 4.3571 1.2389 -0.2394 26 1 4.0257 2.4122 1.1077 27 1 4.6657 2.3774 -2.5473 28 1 5.6012 3.3890 -1.4205 29 1 3.6411 5.0074 -2.6514 30 1 3.5271 9.6228 -5.0771 31 1 2.2224 8.4492 -5.3747 32 1 3.2111 9.0435 -6.7303 33 1 6.4106 9.0741 -7.0009 34 1 3.9991 8.2303 -8.3800 35 1 7.1602 8.0228 -9.7170 36 1 7.8364 6.5677 -7.8886 37 1 6.7944 5.8888 -6.0616 38 1 1.4450 3.0113 -1.6569 39 1 2.5389 1.6610 -2.1873 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_18360570_13259642.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:23 Heat of formation + Delta-G solvation = 42.856222 kcal Electronic energy + Delta-G solvation = -21477.665258 eV Core-core repulsion = 18130.094018 eV Total energy + Delta-G solvation = -3347.571240 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.114 amu Computer time = 0.47 seconds Orbital eigenvalues (eV) -43.80389 -40.68877 -39.58247 -38.28485 -35.41382 -34.40249 -32.66098 -30.11014 -29.69268 -28.29986 -26.84375 -26.74640 -24.75904 -23.29612 -22.17638 -21.21902 -20.40807 -19.19366 -17.78751 -17.54405 -17.44180 -17.06852 -16.84472 -16.51956 -16.17426 -15.92791 -15.74283 -15.26006 -15.10413 -14.78832 -14.72080 -14.27870 -14.12263 -14.01788 -13.73022 -13.62470 -13.56615 -13.47598 -12.82334 -12.62653 -12.39080 -11.98223 -11.85199 -11.75945 -11.44406 -11.04913 -10.96545 -10.79025 -10.21119 -9.95437 -9.92815 -8.62823 -5.10238 0.55826 0.74724 0.83311 1.12884 1.47966 1.59894 1.62288 1.89744 2.19906 2.50750 2.93436 3.26017 3.31577 3.34729 3.41589 3.56049 3.69238 3.96462 4.07880 4.10695 4.18765 4.18844 4.21404 4.27871 4.30151 4.45332 4.52275 4.59229 4.65411 4.69331 4.70734 4.75666 4.79563 4.90172 4.98072 5.26998 5.31811 5.48517 5.63673 6.11751 6.49406 6.88509 7.29458 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 S -0.254 6.254 3 C -0.084 4.084 4 H 0.105 0.895 5 C -0.100 4.100 6 C -0.121 4.121 7 H 0.101 0.899 8 C 0.131 3.869 9 N -0.718 5.718 10 C 0.605 3.395 11 O -0.529 6.529 12 C -0.015 4.015 13 N -0.257 5.257 14 N -0.262 5.262 15 C 0.069 3.931 16 C -0.019 4.019 17 C -0.043 4.043 18 O -0.540 6.540 19 Si 0.719 3.281 20 C -0.176 4.176 21 C -0.123 4.123 22 H 0.077 0.923 23 H 0.100 0.900 24 H 0.076 0.924 25 H 0.096 0.904 26 H 0.083 0.917 27 H 0.075 0.925 28 H 0.074 0.926 29 H 0.407 0.593 30 H 0.083 0.917 31 H 0.093 0.907 32 H 0.121 0.879 33 H 0.125 0.875 34 H 0.383 0.617 35 H -0.248 1.248 36 H -0.249 1.249 37 H 0.166 0.834 38 H 0.073 0.927 39 H 0.098 0.902 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.237 2.941 -1.631 6.224 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.291 4.291 2 S -0.026 6.026 3 C -0.213 4.213 4 H 0.124 0.876 5 C -0.139 4.139 6 C -0.141 4.141 7 H 0.119 0.881 8 C 0.007 3.993 9 N -0.370 5.370 10 C 0.390 3.610 11 O -0.403 6.403 12 C -0.174 4.174 13 N -0.095 5.095 14 N -0.051 5.051 15 C -0.070 4.070 16 C -0.144 4.144 17 C -0.154 4.154 18 O -0.345 6.345 19 Si 0.617 3.383 20 C -0.204 4.204 21 C -0.162 4.162 22 H 0.096 0.904 23 H 0.119 0.881 24 H 0.095 0.905 25 H 0.115 0.885 26 H 0.101 0.899 27 H 0.093 0.907 28 H 0.092 0.908 29 H 0.242 0.758 30 H 0.101 0.899 31 H 0.112 0.888 32 H 0.139 0.861 33 H 0.142 0.858 34 H 0.231 0.769 35 H -0.173 1.173 36 H -0.173 1.173 37 H 0.183 0.817 38 H 0.092 0.908 39 H 0.116 0.884 Dipole moment (debyes) X Y Z Total from point charges -3.868 2.224 -1.367 4.667 hybrid contribution -0.778 1.647 0.444 1.875 sum -4.647 3.872 -0.923 6.118 Atomic orbital electron populations 1.23369 0.94184 1.06600 1.04918 1.86984 1.07510 1.10424 1.97632 1.24682 1.01082 0.94234 1.01262 0.87644 1.22767 0.93334 0.97917 0.99890 1.22758 0.95716 0.98953 0.96696 0.88078 1.21407 0.98197 0.88409 0.91279 1.45802 1.27726 1.30234 1.33189 1.16848 0.82467 0.82399 0.79324 1.90828 1.28905 1.50111 1.70476 1.21773 0.95699 0.98739 1.01224 1.73505 1.23626 1.00580 1.11751 1.45362 1.18665 1.20371 1.20716 1.22651 0.91950 0.86055 1.06357 1.21900 0.92267 1.00217 0.99974 1.24870 0.94038 1.01916 0.94528 1.86470 1.35585 1.37307 1.75159 0.94047 0.82377 0.82611 0.79246 1.21537 1.02914 0.97097 0.98878 1.23414 0.98160 0.99089 0.95574 0.90429 0.88086 0.90522 0.88541 0.89881 0.90651 0.90809 0.75822 0.89861 0.88792 0.86101 0.85788 0.76902 1.17270 1.17267 0.81650 0.90833 0.88355 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.11 10.76 101.05 1.09 1.20 16 2 S -0.25 -0.31 22.18 -107.50 -2.38 -2.69 16 3 C -0.08 0.08 4.27 -25.92 -0.11 -0.03 16 4 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 5 C -0.10 0.14 7.23 -25.92 -0.19 -0.05 16 6 C -0.12 0.24 3.75 -89.81 -0.34 -0.10 16 7 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 8 C 0.13 0.01 5.51 -4.05 -0.02 -0.02 16 9 N -0.72 -0.70 5.55 -61.30 -0.34 -1.04 16 10 C 0.61 2.42 7.82 -12.39 -0.10 2.32 16 11 O -0.53 -3.81 16.93 5.30 0.09 -3.72 16 12 C -0.02 -0.05 7.13 -82.76 -0.59 -0.64 16 13 N -0.26 -0.53 11.67 33.42 0.39 -0.14 16 14 N -0.26 -0.07 3.70 -63.85 -0.24 -0.30 16 15 C 0.07 -0.21 11.01 59.85 0.66 0.44 16 16 C -0.02 0.00 6.18 -82.21 -0.51 -0.51 16 17 C -0.04 0.08 2.99 36.01 0.11 0.19 16 18 O -0.54 1.62 10.02 -35.23 -0.35 1.27 16 19 Si 0.72 -1.52 31.37 -169.99 -5.33 -6.85 16 20 C -0.18 -0.38 9.35 -39.36 -0.37 -0.75 16 21 C -0.12 0.19 7.22 -25.92 -0.19 0.01 16 22 H 0.08 -0.12 8.14 -51.92 -0.42 -0.54 16 23 H 0.10 -0.14 8.14 -51.93 -0.42 -0.56 16 24 H 0.08 -0.12 8.14 -51.92 -0.42 -0.54 16 25 H 0.10 -0.06 8.06 -51.93 -0.42 -0.48 16 26 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 27 H 0.08 0.07 7.84 -51.93 -0.41 -0.34 16 28 H 0.07 0.06 8.14 -51.93 -0.42 -0.36 16 29 H 0.41 -0.24 8.20 -40.82 -0.33 -0.57 16 30 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 31 H 0.09 -0.38 8.14 -51.93 -0.42 -0.80 16 32 H 0.12 -0.55 5.00 -51.93 -0.26 -0.81 16 33 H 0.12 -0.22 7.96 -51.93 -0.41 -0.63 16 34 H 0.38 -2.50 8.39 45.56 0.38 -2.11 16 35 H -0.25 -0.13 7.11 56.52 0.40 0.27 16 36 H -0.25 -0.17 6.83 56.52 0.39 0.22 16 37 H 0.17 0.31 6.84 -52.49 -0.36 -0.05 16 38 H 0.07 -0.16 8.14 -51.93 -0.42 -0.58 16 39 H 0.10 -0.06 7.86 -51.93 -0.41 -0.46 16 LS Contribution 340.16 15.07 5.13 5.13 Total: 0.00 -7.96 340.16 -9.25 -17.22 By element: Atomic # 1 Polarization: -5.27 SS G_CDS: -5.66 Total: -10.93 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -0.55 Total: 2.06 kcal Atomic # 7 Polarization: -1.30 SS G_CDS: -0.19 Total: -1.48 kcal Atomic # 8 Polarization: -2.19 SS G_CDS: -0.26 Total: -2.46 kcal Atomic # 14 Polarization: -1.52 SS G_CDS: -5.33 Total: -6.85 kcal Atomic # 16 Polarization: -0.31 SS G_CDS: -2.38 Total: -2.69 kcal Total LS contribution 5.13 Total: 5.13 kcal Total: -7.96 -9.25 -17.22 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_18360570_13259642.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 60.073 kcal (2) G-P(sol) polarization free energy of solvation -7.963 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 52.110 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.254 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.216 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.856 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.47 seconds