Wall clock time and date at job start Tue Mar 9 2021 12:53:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 N 1.28468 * 124.88202 * 2 1 4 4 C 1.31814 * 110.07177 * 179.97438 * 3 2 1 5 5 C 1.47705 * 126.51590 * 180.02562 * 4 3 2 6 6 O 1.21576 * 120.00207 * 179.97438 * 5 4 3 7 7 N 1.34778 * 120.00345 * 359.97438 * 5 4 3 8 8 C 1.46499 * 120.00304 * 179.97438 * 7 5 4 9 9 H 1.08999 * 112.84911 * 25.33670 * 8 7 5 10 10 C 1.53780 * 113.61500 * 156.52502 * 8 7 5 11 11 C 1.53779 * 87.07890 * 139.98219 * 10 8 7 12 12 H 1.09003 * 113.61585 * 89.20422 * 11 10 8 13 13 O 1.42904 * 113.61785 * 220.01862 * 11 10 8 14 14 C 1.53777 * 113.61543 * 254.13468 * 8 7 5 15 15 C 1.41496 * 106.96607 * 0.02562 * 4 3 2 16 16 C 1.35034 * 124.88692 * 179.97438 * 2 1 3 17 17 C 1.50702 * 126.38702 * 0.02562 * 16 2 1 18 18 O 1.42909 * 109.46803 * 29.97367 * 17 16 2 19 19 Si 1.86293 * 109.47105 * 149.96986 * 17 16 2 20 20 H 1.08994 * 109.46809 * 90.03071 * 1 2 3 21 21 H 1.09002 * 109.46891 * 210.02241 * 1 2 3 22 22 H 1.08999 * 109.46998 * 330.02418 * 1 2 3 23 23 H 0.96998 * 120.00006 * 359.97438 * 7 5 4 24 24 H 1.08999 * 113.61693 * 254.53380 * 10 8 7 25 25 H 1.09007 * 113.61340 * 25.35445 * 10 8 7 26 26 H 0.96697 * 114.00483 * 179.97438 * 13 11 10 27 27 H 1.08999 * 113.61766 * 334.57077 * 14 8 7 28 28 H 1.09006 * 113.60748 * 105.47134 * 14 8 7 29 29 H 1.07999 * 127.24983 * 180.02562 * 15 4 3 30 30 H 1.09000 * 109.47123 * 269.97677 * 17 16 2 31 31 H 0.96700 * 113.99774 * 60.00291 * 18 17 16 32 32 H 1.48501 * 110.00095 * 58.68439 * 19 17 16 33 33 H 1.48507 * 110.00127 * 179.97438 * 19 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4741 0.7169 0.0006 5 6 4.6272 1.6399 0.0013 6 8 5.7597 1.1978 0.0022 7 7 4.4240 2.9723 0.0009 8 6 5.5678 3.8877 0.0022 9 1 6.4660 3.4434 -0.4266 10 6 5.2418 5.2816 -0.5597 11 6 6.1227 5.8539 0.5635 12 1 7.1733 5.9490 0.2889 13 8 5.5944 7.0419 1.1564 14 6 5.8064 4.5735 1.3577 15 6 3.5273 -0.6970 0.0003 16 6 2.2374 -1.1077 0.0005 17 6 1.7535 -2.5349 0.0006 18 8 0.4955 -2.6114 -0.6730 19 14 2.9946 -3.6114 -0.8777 20 1 -0.3633 -0.0006 -1.0276 21 1 -0.3633 -0.8898 0.5142 22 1 -0.3633 0.8902 0.5135 23 1 3.5205 3.3251 -0.0002 24 1 5.6415 5.4541 -1.5589 25 1 4.1896 5.5526 -0.4720 26 1 6.1439 7.4064 1.8637 27 1 4.9092 4.6511 1.9718 28 1 6.6614 4.1751 1.9040 29 1 4.4109 -1.3179 0.0010 30 1 1.6369 -2.8789 1.0283 31 1 0.5245 -2.3200 -1.5946 32 1 4.3155 -3.5158 -0.2058 33 1 2.5294 -5.0217 -0.8840 There are 46 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 46 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_7348514_13259642.mol2 33 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:15 Heat of formation + Delta-G solvation = -8.214033 kcal Electronic energy + Delta-G solvation = -18664.741306 eV Core-core repulsion = 15501.960053 eV Total energy + Delta-G solvation = -3162.781253 eV No. of doubly occupied orbitals = 46 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 254.110 amu Computer time = 0.37 seconds Orbital eigenvalues (eV) -43.88520 -41.12999 -39.53470 -38.02617 -36.39443 -34.57609 -33.88903 -32.54891 -28.67754 -26.90584 -26.80763 -25.61297 -23.62422 -22.23181 -21.28726 -20.67304 -19.11327 -18.75166 -17.64054 -17.58936 -17.10966 -16.88841 -16.30912 -16.07011 -15.73968 -15.55304 -15.26343 -15.05473 -14.65449 -14.02784 -13.74383 -13.60155 -13.52651 -13.45450 -12.74680 -12.61510 -12.41971 -12.29950 -11.87202 -11.78704 -11.34563 -10.94353 -10.82557 -10.33989 -10.04626 -10.00093 -4.97631 0.38265 0.77500 1.17808 1.52902 1.70231 1.95815 2.05630 2.21645 3.15293 3.28140 3.29797 3.34120 3.45397 3.63314 3.78559 3.89916 4.01012 4.28343 4.34188 4.39363 4.43766 4.50716 4.58982 4.68450 4.72171 4.73080 4.91186 4.93693 5.07269 5.16686 5.43460 5.64967 6.31420 6.55854 6.77416 6.85709 7.04008 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.076 3.924 2 N -0.258 5.258 3 N -0.261 5.261 4 C -0.039 4.039 5 C 0.604 3.396 6 O -0.569 6.569 7 N -0.695 5.695 8 C 0.118 3.882 9 H 0.113 0.887 10 C -0.131 4.131 11 C 0.084 3.916 12 H 0.105 0.895 13 O -0.577 6.577 14 C -0.180 4.180 15 C -0.198 4.198 16 C -0.005 4.005 17 C -0.035 4.035 18 O -0.543 6.543 19 Si 0.789 3.211 20 H 0.111 0.889 21 H 0.116 0.884 22 H 0.099 0.901 23 H 0.415 0.585 24 H 0.094 0.906 25 H 0.094 0.906 26 H 0.397 0.603 27 H 0.086 0.914 28 H 0.075 0.925 29 H 0.161 0.839 30 H 0.128 0.872 31 H 0.398 0.602 32 H -0.292 1.292 33 H -0.280 1.280 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.022 0.534 -2.285 4.656 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.062 4.062 2 N -0.047 5.047 3 N -0.100 5.100 4 C -0.197 4.197 5 C 0.390 3.610 6 O -0.446 6.446 7 N -0.346 5.346 8 C 0.013 3.987 9 H 0.131 0.869 10 C -0.169 4.169 11 C 0.024 3.976 12 H 0.123 0.877 13 O -0.385 6.385 14 C -0.219 4.219 15 C -0.226 4.226 16 C -0.131 4.131 17 C -0.146 4.146 18 O -0.350 6.350 19 Si 0.692 3.308 20 H 0.129 0.871 21 H 0.134 0.866 22 H 0.117 0.883 23 H 0.252 0.748 24 H 0.113 0.887 25 H 0.113 0.887 26 H 0.247 0.753 27 H 0.105 0.895 28 H 0.094 0.906 29 H 0.178 0.822 30 H 0.145 0.855 31 H 0.249 0.751 32 H -0.219 1.219 33 H -0.207 1.207 Dipole moment (debyes) X Y Z Total from point charges -4.204 0.177 -2.091 4.698 hybrid contribution 0.498 -0.147 1.192 1.301 sum -3.705 0.030 -0.899 3.813 Atomic orbital electron populations 1.22686 0.70252 1.06567 1.06693 1.45740 1.09126 1.01632 1.48219 1.73482 1.02509 1.14765 1.19201 1.21738 0.91005 0.94204 1.12770 1.17100 0.86412 0.82191 0.75280 1.90780 1.23942 1.77808 1.52075 1.45733 1.10846 1.04599 1.73417 1.22343 0.90238 0.88279 0.97802 0.86948 1.23428 1.01966 0.92215 0.99292 1.23161 0.97910 0.82831 0.93652 0.87704 1.86470 1.53370 1.42567 1.56090 1.24197 1.02952 0.97347 0.97453 1.21627 0.97383 0.93694 1.09868 1.22150 0.90563 0.92323 1.08056 1.24813 0.94725 0.91929 1.03141 1.86481 1.28758 1.89004 1.30774 0.93173 0.73437 0.75570 0.88580 0.87073 0.86571 0.88285 0.74812 0.88722 0.88709 0.75295 0.89537 0.90617 0.82175 0.85501 0.75099 1.21862 1.20702 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.59 10.12 127.77 1.29 0.70 16 2 N -0.26 -0.02 3.70 -355.92 -1.32 -1.34 16 3 N -0.26 -1.24 11.67 -48.18 -0.56 -1.80 16 4 C -0.04 -0.31 7.13 42.45 0.30 -0.01 16 5 C 0.60 6.12 7.83 86.75 0.68 6.80 16 6 O -0.57 -9.41 16.54 -3.96 -0.07 -9.47 16 7 N -0.70 -3.03 5.36 -443.04 -2.37 -5.40 16 8 C 0.12 0.26 4.21 45.52 0.19 0.45 16 9 H 0.11 0.46 7.50 -2.39 -0.02 0.45 16 10 C -0.13 0.12 7.66 31.12 0.24 0.36 16 11 C 0.08 -0.10 5.21 31.18 0.16 0.06 16 12 H 0.11 -0.49 8.14 -2.39 -0.02 -0.51 16 13 O -0.58 -0.43 13.67 -148.98 -2.04 -2.47 16 14 C -0.18 -0.17 7.73 31.18 0.24 0.08 16 15 C -0.20 -1.13 9.35 22.41 0.21 -0.92 16 16 C -0.01 0.00 6.18 41.40 0.26 0.25 16 17 C -0.03 0.15 2.87 71.24 0.20 0.35 16 18 O -0.54 3.97 10.40 -148.98 -1.55 2.42 16 19 Si 0.79 -2.83 31.37 68.60 2.15 -0.68 16 20 H 0.11 -1.33 8.14 -2.39 -0.02 -1.35 16 21 H 0.12 -1.03 6.77 -2.39 -0.02 -1.05 16 22 H 0.10 -0.83 8.14 -2.39 -0.02 -0.85 16 23 H 0.41 0.59 8.44 -92.71 -0.78 -0.19 16 24 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 25 H 0.09 -0.03 8.11 -2.38 -0.02 -0.05 16 26 H 0.40 -2.84 9.12 -74.06 -0.68 -3.51 16 27 H 0.09 0.21 8.14 -2.39 -0.02 0.19 16 28 H 0.08 0.09 8.14 -2.38 -0.02 0.07 16 29 H 0.16 0.97 6.84 -2.91 -0.02 0.95 16 30 H 0.13 -0.55 7.96 -2.39 -0.02 -0.57 16 31 H 0.40 -5.75 8.70 -74.06 -0.64 -6.39 16 32 H -0.29 -1.02 6.83 99.48 0.68 -0.34 16 33 H -0.28 -0.52 7.11 99.48 0.71 0.18 16 Total: 0.00 -20.98 287.23 -2.90 -23.88 By element: Atomic # 1 Polarization: -12.34 SS G_CDS: -0.92 Total: -13.26 kcal Atomic # 6 Polarization: 4.34 SS G_CDS: 3.78 Total: 8.12 kcal Atomic # 7 Polarization: -4.29 SS G_CDS: -4.25 Total: -8.54 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -3.65 Total: -9.52 kcal Atomic # 14 Polarization: -2.83 SS G_CDS: 2.15 Total: -0.68 kcal Total: -20.98 -2.90 -23.88 kcal The number of atoms in the molecule is 33 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_7348514_13259642.mol2 33 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 15.664 kcal (2) G-P(sol) polarization free energy of solvation -20.980 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -5.317 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.897 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.878 kcal (6) G-S(sol) free energy of system = (1) + (5) -8.214 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.37 seconds