Wall clock time and date at job start Tue Mar 9 2021 12:53:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86301 * 109.47058 * 2 1 4 4 C 1.86303 * 109.46984 * 240.00330 * 2 1 3 5 5 C 1.86295 * 109.47058 * 120.00188 * 2 1 3 6 6 C 1.52999 * 109.47259 * 60.00149 * 5 2 1 7 7 N 1.46502 * 109.47152 * 180.02562 * 6 5 2 8 8 C 1.34779 * 119.99861 * 179.97438 * 7 6 5 9 9 O 1.21594 * 119.99923 * 0.02562 * 8 7 6 10 10 C 1.47572 * 119.99650 * 179.97438 * 8 7 6 11 11 C 1.36503 * 120.00563 * 179.97438 * 10 8 7 12 12 N 1.35940 * 120.50299 * 180.02562 * 11 10 8 13 13 C 1.36999 * 132.41397 * 180.02562 * 12 11 10 14 14 C 1.50701 * 126.42589 * 0.02562 * 13 12 11 15 15 O 1.42896 * 109.47417 * 330.00365 * 14 13 12 16 16 Si 1.86301 * 109.47149 * 210.00349 * 14 13 12 17 17 H 1.48506 * 109.47302 * 59.99966 * 16 14 13 18 18 H 1.48503 * 109.47334 * 300.00099 * 16 14 13 19 19 H 1.48500 * 109.47376 * 180.02562 * 16 14 13 20 20 C 1.35004 * 107.14687 * 180.28179 * 13 12 11 21 21 N 1.33587 * 108.65456 * 359.57066 * 20 13 12 22 22 C 1.32419 * 109.22142 * 0.43301 * 21 20 13 23 23 C 1.41248 * 132.11979 * 179.72854 * 22 21 20 24 24 Br 1.89101 * 120.25507 * 0.03437 * 23 22 21 25 25 C 1.35698 * 119.49061 * 180.02562 * 23 22 21 26 26 H 1.09000 * 109.46719 * 299.99927 * 1 2 3 27 27 H 1.09006 * 109.46909 * 60.00046 * 1 2 3 28 28 H 1.08998 * 109.47076 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46836 * 180.02562 * 3 2 1 30 30 H 1.08996 * 109.47553 * 300.00200 * 3 2 1 31 31 H 1.09000 * 109.47296 * 60.00426 * 3 2 1 32 32 H 1.08995 * 109.46814 * 299.99740 * 4 2 1 33 33 H 1.08996 * 109.47081 * 60.00134 * 4 2 1 34 34 H 1.08995 * 109.46967 * 179.97438 * 4 2 1 35 35 H 1.09000 * 109.47261 * 299.99553 * 5 2 1 36 36 H 1.09001 * 109.46884 * 179.97438 * 5 2 1 37 37 H 1.08999 * 109.46951 * 59.99605 * 6 5 2 38 38 H 1.08995 * 109.47015 * 299.99898 * 6 5 2 39 39 H 0.97000 * 119.99826 * 359.97438 * 7 6 5 40 40 H 1.07994 * 119.74665 * 0.06874 * 11 10 8 41 41 H 1.09002 * 109.46793 * 90.00818 * 14 13 12 42 42 H 0.96708 * 114.00095 * 299.99924 * 15 14 13 43 43 H 1.08000 * 125.67691 * 179.73129 * 20 13 12 44 44 H 1.08007 * 120.23412 * 179.97438 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7565 0.0000 4 6 2.4840 -0.8782 -1.5212 5 6 2.4840 -0.8783 1.5211 6 6 1.9740 -2.3208 1.5210 7 7 2.4619 -3.0112 2.7175 8 6 2.1358 -4.3014 2.9310 9 8 1.4371 -4.8924 2.1304 10 6 2.6277 -4.9970 4.1360 11 6 2.2971 -6.3036 4.3527 12 7 2.7442 -6.9540 5.4595 13 6 2.5682 -8.2348 5.9129 14 6 1.7711 -9.3213 5.2380 15 8 0.7000 -8.7352 4.4957 16 14 1.0761 -10.4732 6.5268 17 1 0.1943 -9.7117 7.4476 18 1 2.1892 -11.0824 7.2983 19 1 0.2912 -11.5442 5.8618 20 6 3.2379 -8.3393 7.0804 21 7 3.8216 -7.1671 7.3446 22 6 3.5340 -6.3092 6.3777 23 6 3.8884 -4.9571 6.1747 24 35 4.9769 -4.0581 7.4329 25 6 3.4418 -4.3081 5.0698 26 1 -0.3633 0.5138 0.8900 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 -1.0276 -0.0005 29 1 3.5740 1.7564 -0.0005 30 1 2.1207 2.2704 -0.8899 31 1 2.1208 2.2703 0.8900 32 1 2.1207 -1.9058 -1.5212 33 1 2.1207 -0.3643 -2.4111 34 1 3.5739 -0.8778 -1.5215 35 1 2.1207 -0.3644 2.4111 36 1 3.5740 -0.8786 1.5208 37 1 2.3373 -2.8345 0.6310 38 1 0.8841 -2.3208 1.5210 39 1 3.0195 -2.5398 3.3560 40 1 1.6762 -6.8247 3.6391 41 1 2.4184 -9.8803 4.5623 42 1 0.0828 -8.2215 5.0346 43 1 3.2948 -9.2243 7.6968 44 1 3.7051 -3.2740 4.9028 RHF calculation, no. of doubly occupied orbitals= 60 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_9043546_12335884.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:18 Heat of formation + Delta-G solvation = -20.384505 kcal Electronic energy + Delta-G solvation = -26433.818240 eV Core-core repulsion = 22557.176803 eV Total energy + Delta-G solvation = -3876.641437 eV No. of doubly occupied orbitals = 60 Molecular weight (most abundant/longest-lived isotopes) = 399.053 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -44.22742 -41.04470 -38.52900 -38.05690 -36.47780 -35.24062 -32.91999 -31.91027 -31.15008 -30.20596 -29.46857 -28.51184 -28.48726 -26.93246 -25.75669 -24.06962 -23.48894 -22.54119 -21.81375 -19.52904 -18.70911 -18.27698 -17.79382 -17.49890 -16.95440 -16.66334 -16.39960 -16.00782 -15.87231 -15.46015 -15.14279 -15.12713 -14.75634 -14.49851 -14.34174 -14.14034 -14.04334 -13.89647 -13.48195 -13.37586 -13.35419 -13.29194 -13.16827 -12.98830 -12.95975 -12.76280 -12.54369 -12.26414 -12.15124 -11.56027 -11.39311 -11.30568 -11.22399 -10.97030 -10.92799 -10.89343 -10.80136 -10.24363 -9.98721 -9.05923 -0.85555 -0.36858 0.21926 0.79878 1.14135 1.32262 1.34188 1.41490 1.54432 1.74924 1.77184 1.78559 1.87521 2.15065 2.29776 2.53926 2.79224 2.97549 3.17263 3.39529 3.43270 3.48310 3.82370 3.92016 4.05876 4.13090 4.22139 4.30160 4.41547 4.49632 4.54743 4.63868 4.64470 4.68338 4.68866 4.70255 4.72682 4.83857 4.97289 5.04439 5.26623 5.27645 5.39694 5.48548 5.50373 5.60659 6.16106 6.29440 6.53052 6.99952 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.455 4.455 2 Si 1.027 2.973 3 C -0.452 4.452 4 C -0.455 4.455 5 C -0.436 4.436 6 C 0.128 3.872 7 N -0.720 5.720 8 C 0.572 3.428 9 O -0.529 6.529 10 C -0.173 4.173 11 C 0.163 3.837 12 N -0.353 5.353 13 C -0.086 4.086 14 C -0.052 4.052 15 O -0.540 6.540 16 Si 0.973 3.027 17 H -0.247 1.247 18 H -0.243 1.243 19 H -0.244 1.244 20 C 0.042 3.958 21 N -0.461 5.461 22 C 0.243 3.757 23 C -0.064 4.064 24 Br 0.008 6.992 25 C -0.041 4.041 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.069 0.931 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.070 0.930 33 H 0.070 0.930 34 H 0.069 0.931 35 H 0.085 0.915 36 H 0.085 0.915 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.401 0.599 40 H 0.196 0.804 41 H 0.128 0.872 42 H 0.379 0.621 43 H 0.191 0.809 44 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.608 2.394 -0.962 2.651 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.562 4.562 2 Si 1.221 2.779 3 C -0.559 4.559 4 C -0.562 4.562 5 C -0.519 4.519 6 C 0.006 3.994 7 N -0.372 5.372 8 C 0.358 3.642 9 O -0.406 6.406 10 C -0.180 4.180 11 C 0.037 3.963 12 N -0.026 5.026 13 C -0.197 4.197 14 C -0.162 4.162 15 O -0.344 6.344 16 Si 0.791 3.209 17 H -0.170 1.170 18 H -0.166 1.166 19 H -0.167 1.167 20 C -0.108 4.108 21 N -0.179 5.179 22 C -0.002 4.002 23 C -0.146 4.146 24 Br 0.093 6.907 25 C -0.068 4.068 26 H 0.088 0.912 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.089 0.911 34 H 0.088 0.912 35 H 0.104 0.896 36 H 0.104 0.896 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.237 0.763 40 H 0.213 0.787 41 H 0.145 0.855 42 H 0.227 0.773 43 H 0.208 0.792 44 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges -0.267 1.535 -0.227 1.574 hybrid contribution -0.285 0.549 -0.488 0.788 sum -0.552 2.084 -0.715 2.271 Atomic orbital electron populations 1.26196 1.20793 1.04654 1.04568 0.78937 0.66902 0.66560 0.65463 1.26137 1.06300 1.18901 1.04603 1.26196 1.06302 1.08259 1.15470 1.26601 1.06793 1.01094 1.17448 1.21160 0.99667 0.91365 0.87224 1.46052 1.53630 1.11400 1.26157 1.17536 0.80278 0.81987 0.84441 1.90859 1.37635 1.66031 1.46087 1.19319 1.05722 0.94050 0.98921 1.22206 0.94310 0.92333 0.87450 1.42619 1.33375 1.10406 1.16238 1.22089 1.11755 0.85745 1.00126 1.24873 0.89874 0.96860 1.04562 1.86523 1.38745 1.71465 1.37707 0.85404 0.81059 0.78305 0.76148 1.17029 1.16586 1.16669 1.22523 0.96703 0.97230 0.94386 1.70861 1.23610 1.00426 1.23041 1.20438 0.96803 0.94082 0.88885 1.20444 1.04504 0.91280 0.98362 1.96856 1.64383 1.73825 1.55616 1.21101 0.94254 1.00451 0.90946 0.91223 0.91098 0.91074 0.91213 0.91056 0.91211 0.91073 0.91098 0.91225 0.89592 0.89597 0.90778 0.90776 0.76322 0.78699 0.85476 0.77290 0.79205 0.82823 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.12 8.65 101.05 0.87 2.00 16 2 Si 1.03 -4.29 12.19 -169.99 -2.07 -6.36 16 3 C -0.45 1.27 8.65 101.05 0.87 2.15 16 4 C -0.46 1.10 8.65 101.05 0.87 1.97 16 5 C -0.44 1.77 4.56 37.16 0.17 1.94 16 6 C 0.13 -0.24 5.05 -4.04 -0.02 -0.26 16 7 N -0.72 1.09 5.51 -61.34 -0.34 0.75 16 8 C 0.57 0.61 7.76 -12.45 -0.10 0.51 16 9 O -0.53 -2.34 16.27 5.28 0.09 -2.25 16 10 C -0.17 -0.05 5.84 -105.37 -0.61 -0.66 16 11 C 0.16 0.14 9.91 -16.36 -0.16 -0.02 16 12 N -0.35 -0.59 2.93 -58.09 -0.17 -0.76 16 13 C -0.09 -0.05 6.25 -81.43 -0.51 -0.56 16 14 C -0.05 0.09 3.06 36.01 0.11 0.20 16 15 O -0.54 0.60 10.90 -35.23 -0.38 0.22 16 16 Si 0.97 -2.21 26.59 -169.99 -4.52 -6.73 16 17 H -0.25 0.33 7.11 56.52 0.40 0.73 16 18 H -0.24 0.57 6.84 56.52 0.39 0.95 16 19 H -0.24 0.25 7.11 56.52 0.40 0.65 16 20 C 0.04 0.06 10.44 -17.94 -0.19 -0.13 16 21 N -0.46 -1.84 11.30 -12.70 -0.14 -1.98 16 22 C 0.24 0.75 7.59 -155.91 -1.18 -0.44 16 23 C -0.06 -0.10 6.24 -39.35 -0.25 -0.34 16 24 Br 0.01 0.01 33.72 -68.01 -2.29 -2.28 16 25 C -0.04 0.03 9.26 -39.15 -0.36 -0.33 16 26 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.14 7.79 -51.93 -0.40 -0.55 16 29 H 0.07 -0.19 7.96 -51.93 -0.41 -0.60 16 30 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 31 H 0.07 -0.19 7.96 -51.93 -0.41 -0.61 16 32 H 0.07 -0.14 7.79 -51.93 -0.40 -0.54 16 33 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 34 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 35 H 0.09 -0.40 7.96 -51.93 -0.41 -0.81 16 36 H 0.09 -0.39 7.96 -51.93 -0.41 -0.81 16 37 H 0.07 -0.10 7.79 -51.93 -0.40 -0.51 16 38 H 0.07 -0.11 7.79 -51.93 -0.40 -0.51 16 39 H 0.40 -1.60 6.51 -40.82 -0.27 -1.86 16 40 H 0.20 0.12 6.19 -52.49 -0.32 -0.21 16 41 H 0.13 -0.33 7.96 -51.93 -0.41 -0.75 16 42 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 43 H 0.19 -0.26 6.71 -52.49 -0.35 -0.61 16 44 H 0.15 -0.58 6.44 -52.48 -0.34 -0.92 16 LS Contribution 387.73 15.07 5.84 5.84 Total: 0.00 -8.45 387.73 -9.92 -18.37 By element: Atomic # 1 Polarization: -5.40 SS G_CDS: -5.45 Total: -10.85 kcal Atomic # 6 Polarization: 6.50 SS G_CDS: -0.48 Total: 6.02 kcal Atomic # 7 Polarization: -1.33 SS G_CDS: -0.65 Total: -1.99 kcal Atomic # 8 Polarization: -1.74 SS G_CDS: -0.30 Total: -2.03 kcal Atomic # 14 Polarization: -6.49 SS G_CDS: -6.59 Total: -13.09 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 5.84 Total: 5.84 kcal Total: -8.45 -9.92 -18.37 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9043546_12335884.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.018 kcal (2) G-P(sol) polarization free energy of solvation -8.446 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -10.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.367 kcal (6) G-S(sol) free energy of system = (1) + (5) -20.385 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds