Wall clock time and date at job start Tue Mar 9 2021 12:53:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 N 1.28457 * 124.89065 * 2 1 4 4 C 1.31807 * 110.07898 * 180.02562 * 3 2 1 5 5 C 1.47709 * 126.52020 * 180.02562 * 4 3 2 6 6 O 1.21568 * 120.00395 * 179.97438 * 5 4 3 7 7 N 1.34781 * 119.99883 * 359.97438 * 5 4 3 8 8 C 1.46499 * 119.99766 * 179.97438 * 7 5 4 9 9 C 1.53004 * 109.47032 * 179.97438 * 8 7 5 10 10 Si 1.86304 * 109.47219 * 179.97438 * 9 8 7 11 11 C 1.86305 * 109.46839 * 60.00168 * 10 9 8 12 12 C 1.86301 * 109.47035 * 179.97438 * 10 9 8 13 13 C 1.86295 * 109.47104 * 300.00334 * 10 9 8 14 14 C 1.41495 * 106.96159 * 359.77250 * 4 3 2 15 15 C 1.35039 * 124.88192 * 180.02562 * 2 1 3 16 16 C 1.50698 * 126.38460 * 359.96147 * 15 2 1 17 17 O 1.42895 * 109.47614 * 29.99690 * 16 15 2 18 18 Si 1.86300 * 109.47338 * 149.99690 * 16 15 2 19 19 H 1.48503 * 109.46942 * 299.99993 * 18 16 15 20 20 H 1.48503 * 109.47276 * 59.99467 * 18 16 15 21 21 H 1.48494 * 109.47372 * 179.97438 * 18 16 15 22 22 H 1.08998 * 109.46923 * 269.97740 * 1 2 3 23 23 H 1.09000 * 109.47030 * 29.97351 * 1 2 3 24 24 H 1.08993 * 109.47271 * 149.97239 * 1 2 3 25 25 H 0.96997 * 120.00242 * 359.97438 * 7 5 4 26 26 H 1.09005 * 109.47129 * 299.99485 * 8 7 5 27 27 H 1.08995 * 109.47320 * 59.99601 * 8 7 5 28 28 H 1.08991 * 109.47199 * 299.99816 * 9 8 7 29 29 H 1.09000 * 109.46671 * 60.00049 * 9 8 7 30 30 H 1.09005 * 109.47164 * 59.99841 * 11 10 9 31 31 H 1.08995 * 109.47108 * 179.97438 * 11 10 9 32 32 H 1.08995 * 109.47153 * 300.00121 * 11 10 9 33 33 H 1.09000 * 109.46753 * 60.00524 * 12 10 9 34 34 H 1.09005 * 109.46985 * 180.02562 * 12 10 9 35 35 H 1.08996 * 109.47009 * 300.00532 * 12 10 9 36 36 H 1.08999 * 109.47413 * 60.00419 * 13 10 9 37 37 H 1.09005 * 109.47020 * 179.97438 * 13 10 9 38 38 H 1.08995 * 109.47087 * 299.99684 * 13 10 9 39 39 H 1.08003 * 127.25109 * 180.24464 * 14 4 3 40 40 H 1.09001 * 109.47122 * 269.99765 * 16 15 2 41 41 H 0.96698 * 114.00355 * 180.02562 * 17 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0537 0.0000 4 6 3.4741 0.7167 -0.0006 5 6 4.6274 1.6396 -0.0002 6 8 5.7598 1.1975 -0.0003 7 7 4.4242 2.9720 0.0002 8 6 5.5681 3.8873 0.0011 9 6 5.0650 5.3323 0.0009 10 14 6.5196 6.4964 0.0028 11 6 7.5549 6.1989 -1.5173 12 6 5.9069 8.2558 0.0016 13 6 7.5514 6.1983 1.5250 14 6 3.5272 -0.6972 0.0044 15 6 2.2373 -1.1078 -0.0005 16 6 1.7533 -2.5349 -0.0003 17 8 0.4950 -2.6113 -0.6732 18 14 2.9938 -3.6115 -0.8794 19 1 3.1519 -3.1426 -2.2795 20 1 4.3016 -3.5322 -0.1802 21 1 2.5172 -5.0179 -0.8787 22 1 -0.3633 -0.0004 1.0277 23 1 -0.3633 0.8902 -0.5134 24 1 -0.3633 -0.8897 -0.5142 25 1 3.5207 3.3249 0.0000 26 1 6.1724 3.7128 0.8914 27 1 6.1732 3.7135 -0.8885 28 1 4.4610 5.5065 -0.8895 29 1 4.4596 5.5063 0.8904 30 1 6.9511 6.3733 -2.4080 31 1 8.4057 6.8803 -1.5164 32 1 7.9133 5.1696 -1.5171 33 1 5.3010 8.4300 0.8908 34 1 6.7580 8.9368 0.0023 35 1 5.3035 8.4297 -0.8892 36 1 7.9099 5.1690 1.5251 37 1 8.4027 6.8791 1.5259 38 1 6.9457 6.3723 2.4143 39 1 4.4108 -1.3183 0.0091 40 1 1.6372 -2.8791 1.0274 41 1 0.1226 -3.5029 -0.7108 RHF calculation, no. of doubly occupied orbitals= 51 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_9043546_13259642.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:26 Heat of formation + Delta-G solvation = -38.320902 kcal Electronic energy + Delta-G solvation = -20315.947620 eV Core-core repulsion = 17163.024826 eV Total energy + Delta-G solvation = -3152.922794 eV No. of doubly occupied orbitals = 51 Molecular weight (most abundant/longest-lived isotopes) = 285.142 amu Computer time = 0.38 seconds Orbital eigenvalues (eV) -43.68380 -40.16183 -38.15645 -36.08872 -34.33326 -32.81188 -31.31684 -29.42413 -28.43279 -28.39189 -28.35203 -26.74671 -24.59007 -22.90967 -22.02929 -20.61558 -18.77804 -18.38163 -17.37809 -17.31920 -16.75421 -16.40413 -16.15929 -15.39783 -15.22960 -14.84376 -14.63685 -14.29159 -14.19917 -14.00446 -13.94740 -13.78369 -13.60531 -13.49001 -13.28729 -13.19933 -13.07522 -12.99844 -12.80685 -12.41456 -12.36902 -12.02121 -11.69585 -11.28605 -10.94781 -10.83000 -10.79213 -10.60840 -10.09077 -9.81802 -9.80678 0.62992 0.82936 1.18710 1.35779 1.49025 1.58998 1.69572 1.85939 1.87737 1.91179 2.40629 2.60015 2.68244 2.86849 3.39200 3.54902 4.04260 4.13215 4.17308 4.23474 4.24482 4.41719 4.57871 4.68833 4.69774 4.72185 4.74175 4.77641 4.77991 4.79945 4.82355 4.84057 5.01785 5.22886 5.40244 5.47538 5.56296 5.59626 5.60256 5.75066 6.22863 6.62563 6.99968 7.39836 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.077 3.923 2 N -0.259 5.259 3 N -0.258 5.258 4 C -0.015 4.015 5 C 0.603 3.397 6 O -0.532 6.532 7 N -0.717 5.717 8 C 0.128 3.872 9 C -0.434 4.434 10 Si 1.025 2.975 11 C -0.454 4.454 12 C -0.451 4.451 13 C -0.454 4.454 14 C -0.185 4.185 15 C 0.026 3.974 16 C -0.056 4.056 17 O -0.551 6.551 18 Si 0.966 3.034 19 H -0.245 1.245 20 H -0.243 1.243 21 H -0.250 1.250 22 H 0.081 0.919 23 H 0.091 0.909 24 H 0.124 0.876 25 H 0.407 0.593 26 H 0.071 0.929 27 H 0.071 0.929 28 H 0.084 0.916 29 H 0.084 0.916 30 H 0.068 0.932 31 H 0.069 0.931 32 H 0.071 0.929 33 H 0.068 0.932 34 H 0.070 0.930 35 H 0.068 0.932 36 H 0.071 0.929 37 H 0.069 0.931 38 H 0.068 0.932 39 H 0.167 0.833 40 H 0.088 0.912 41 H 0.389 0.611 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.738 -1.121 0.630 4.910 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.063 4.063 2 N -0.047 5.047 3 N -0.096 5.096 4 C -0.174 4.174 5 C 0.388 3.612 6 O -0.407 6.407 7 N -0.370 5.370 8 C 0.006 3.994 9 C -0.518 4.518 10 Si 1.220 2.780 11 C -0.561 4.561 12 C -0.558 4.558 13 C -0.561 4.561 14 C -0.213 4.213 15 C -0.099 4.099 16 C -0.166 4.166 17 O -0.359 6.359 18 Si 0.785 3.215 19 H -0.168 1.168 20 H -0.166 1.166 21 H -0.174 1.174 22 H 0.099 0.901 23 H 0.110 0.890 24 H 0.142 0.858 25 H 0.242 0.758 26 H 0.090 0.910 27 H 0.090 0.910 28 H 0.102 0.898 29 H 0.102 0.898 30 H 0.087 0.913 31 H 0.088 0.912 32 H 0.090 0.910 33 H 0.088 0.912 34 H 0.089 0.911 35 H 0.088 0.912 36 H 0.090 0.910 37 H 0.088 0.912 38 H 0.087 0.913 39 H 0.184 0.816 40 H 0.106 0.894 41 H 0.239 0.761 Dipole moment (debyes) X Y Z Total from point charges -4.072 -0.387 0.142 4.093 hybrid contribution -0.617 -0.716 0.401 1.027 sum -4.690 -1.103 0.543 4.848 Atomic orbital electron populations 1.22570 0.72371 1.06760 1.04594 1.45324 1.08088 1.01989 1.49334 1.73496 1.02879 1.14080 1.19115 1.21762 0.90836 0.93710 1.11121 1.16893 0.86534 0.81569 0.76246 1.90807 1.22526 1.77194 1.50160 1.46038 1.10870 1.05256 1.74801 1.21110 0.88405 0.87345 1.02585 1.26591 1.15625 1.04002 1.05540 0.78967 0.65696 0.66119 0.67257 1.26186 1.09560 1.05099 1.15290 1.26129 1.06282 1.18992 1.04440 1.26185 1.09518 1.05110 1.15316 1.21446 0.96132 0.94153 1.09527 1.20739 0.90813 0.89382 1.08953 1.24395 0.94219 0.95915 1.02099 1.86289 1.35042 1.35192 1.79356 0.85459 0.77880 0.77144 0.81052 1.16760 1.16563 1.17361 0.90061 0.88991 0.85794 0.75808 0.91041 0.91046 0.89756 0.89767 0.91254 0.91163 0.91029 0.91245 0.91102 0.91243 0.91028 0.91160 0.91252 0.81578 0.89392 0.76148 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.11 11.00 59.85 0.66 0.55 16 2 N -0.26 -0.57 3.70 -63.85 -0.24 -0.81 16 3 N -0.26 -0.98 11.67 33.42 0.39 -0.59 16 4 C -0.02 -0.07 7.13 -82.77 -0.59 -0.66 16 5 C 0.60 3.23 7.82 -12.39 -0.10 3.13 16 6 O -0.53 -4.35 16.93 5.31 0.09 -4.26 16 7 N -0.72 -1.79 5.55 -61.29 -0.34 -2.13 16 8 C 0.13 0.12 5.05 -4.04 -0.02 0.10 16 9 C -0.43 0.73 4.56 37.16 0.17 0.90 16 10 Si 1.02 -2.69 12.19 -169.99 -2.07 -4.76 16 11 C -0.45 0.49 8.65 101.05 0.87 1.36 16 12 C -0.45 0.73 8.65 101.05 0.87 1.60 16 13 C -0.45 0.50 8.65 101.05 0.87 1.38 16 14 C -0.18 -0.67 9.35 -39.37 -0.37 -1.03 16 15 C 0.03 0.05 6.21 -82.21 -0.51 -0.46 16 16 C -0.06 0.10 2.98 36.00 0.11 0.20 16 17 O -0.55 1.62 9.76 -35.23 -0.34 1.28 16 18 Si 0.97 -1.28 26.64 -169.99 -4.53 -5.81 16 19 H -0.24 -0.24 7.11 56.52 0.40 0.16 16 20 H -0.24 0.07 6.87 56.52 0.39 0.46 16 21 H -0.25 0.47 7.11 56.52 0.40 0.87 16 22 H 0.08 -0.21 8.14 -51.93 -0.42 -0.64 16 23 H 0.09 -0.20 8.14 -51.93 -0.42 -0.62 16 24 H 0.12 -0.27 5.19 -51.93 -0.27 -0.54 16 25 H 0.41 0.40 8.20 -40.82 -0.33 0.07 16 26 H 0.07 0.08 7.79 -51.93 -0.40 -0.32 16 27 H 0.07 0.09 7.79 -51.93 -0.40 -0.32 16 28 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 29 H 0.08 -0.17 7.96 -51.93 -0.41 -0.59 16 30 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 31 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 32 H 0.07 -0.04 7.79 -51.93 -0.40 -0.44 16 33 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 34 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 35 H 0.07 -0.11 7.96 -51.93 -0.41 -0.52 16 36 H 0.07 -0.04 7.79 -51.93 -0.40 -0.45 16 37 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 38 H 0.07 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.17 0.44 6.87 -52.48 -0.36 0.08 16 40 H 0.09 -0.33 7.96 -51.93 -0.41 -0.74 16 41 H 0.39 -2.85 8.74 45.56 0.40 -2.45 16 LS Contribution 343.67 15.07 5.18 5.18 Total: 0.00 -8.52 343.67 -5.87 -14.38 By element: Atomic # 1 Polarization: -3.59 SS G_CDS: -5.97 Total: -9.56 kcal Atomic # 6 Polarization: 5.10 SS G_CDS: 1.97 Total: 7.07 kcal Atomic # 7 Polarization: -3.33 SS G_CDS: -0.19 Total: -3.52 kcal Atomic # 8 Polarization: -2.72 SS G_CDS: -0.25 Total: -2.98 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: -6.60 Total: -10.57 kcal Total LS contribution 5.18 Total: 5.18 kcal Total: -8.52 -5.87 -14.38 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9043546_13259642.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.939 kcal (2) G-P(sol) polarization free energy of solvation -8.516 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -32.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -5.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.382 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.321 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.38 seconds