Wall clock time and date at job start Tue Mar 9 2021 12:53:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 C 1.34785 * 119.99843 * 2 1 4 4 O 1.21566 * 119.99414 * 183.52009 * 3 2 1 5 5 C 1.47705 * 120.00110 * 3.51995 * 3 2 1 6 6 N 1.31810 * 126.51872 * 353.43127 * 5 3 2 7 7 N 1.28464 * 110.07461 * 180.02562 * 6 5 3 8 8 C 1.46504 * 124.88703 * 179.97438 * 7 6 5 9 9 C 1.35030 * 110.23124 * 359.97438 * 7 6 5 10 10 C 1.50706 * 126.38726 * 179.97438 * 9 7 6 11 11 O 1.42899 * 109.47076 * 29.97612 * 10 9 7 12 12 Si 1.86301 * 109.46953 * 149.97394 * 10 9 7 13 13 C 1.35367 * 107.22912 * 359.97438 * 9 7 6 14 14 C 1.46495 * 120.00370 * 180.02562 * 2 1 3 15 15 H 1.08997 * 109.47713 * 179.97438 * 14 2 1 16 16 C 1.53007 * 109.46635 * 300.00061 * 14 2 1 17 17 C 1.53000 * 109.46877 * 179.97438 * 16 14 2 18 18 C 1.53000 * 109.47319 * 300.00234 * 17 16 14 19 19 H 1.09000 * 109.47038 * 299.99635 * 18 17 16 20 20 O 1.42899 * 109.47217 * 180.02562 * 18 17 16 21 21 C 1.52996 * 109.47294 * 59.99713 * 18 17 16 22 22 C 1.52992 * 109.47153 * 300.00118 * 21 18 17 23 23 H 1.08998 * 109.47090 * 84.08246 * 1 2 3 24 24 H 1.08999 * 109.47207 * 204.08488 * 1 2 3 25 25 H 1.09001 * 109.47118 * 324.08281 * 1 2 3 26 26 H 1.08997 * 109.46919 * 90.02862 * 8 7 6 27 27 H 1.09002 * 109.47387 * 210.02364 * 8 7 6 28 28 H 1.09006 * 109.47028 * 330.02415 * 8 7 6 29 29 H 1.08994 * 109.47026 * 269.97326 * 10 9 7 30 30 H 0.96696 * 114.00153 * 60.00000 * 11 10 9 31 31 H 1.48500 * 109.99847 * 179.97438 * 12 10 9 32 32 H 1.48496 * 110.00357 * 301.32149 * 12 10 9 33 33 H 1.08003 * 127.25135 * 179.97438 * 13 9 7 34 34 H 1.08992 * 109.47102 * 299.99325 * 16 14 2 35 35 H 1.09000 * 109.47393 * 59.99995 * 16 14 2 36 36 H 1.09000 * 109.47196 * 179.97438 * 17 16 14 37 37 H 1.09006 * 109.47408 * 59.99861 * 17 16 14 38 38 H 0.96695 * 114.00464 * 59.99601 * 20 18 17 39 39 H 1.09004 * 109.47291 * 179.97438 * 21 18 17 40 40 H 1.08997 * 109.47030 * 60.00504 * 21 18 17 41 41 H 1.08997 * 109.47467 * 300.00118 * 22 21 18 42 42 H 1.09000 * 109.47177 * 179.97438 * 22 21 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1389 1.1673 0.0000 4 8 3.3528 1.1682 -0.0646 5 6 1.4025 2.4452 0.0785 6 7 0.0944 2.6009 0.0316 7 7 -0.2051 3.8465 0.1270 8 6 -1.5677 4.3843 0.1105 9 6 0.9167 4.5888 0.2447 10 6 0.9866 6.0883 0.3791 11 8 -0.1873 6.5623 1.0418 12 14 2.4917 6.5531 1.3738 13 6 1.9669 3.7351 0.2194 14 6 2.1976 -1.2686 -0.0006 15 1 3.2692 -1.0695 -0.0009 16 6 1.8279 -2.0715 1.2484 17 6 2.5925 -3.3967 1.2475 18 6 2.2224 -4.1983 -0.0021 19 1 1.1507 -4.3972 -0.0019 20 8 2.9361 -5.4363 -0.0025 21 6 2.5920 -3.3954 -1.2509 22 6 1.8274 -2.0703 -1.2501 23 1 -0.3633 0.1059 -1.0222 24 1 -0.3633 -0.9382 0.4194 25 1 -0.3633 0.8323 0.6029 26 1 -1.9532 4.4284 1.1291 27 1 -1.5576 5.3867 -0.3177 28 1 -2.2061 3.7382 -0.4921 29 1 1.0520 6.5391 -0.6111 30 1 -0.3101 6.2016 1.9305 31 1 2.5724 8.0293 1.5130 32 1 2.4301 5.9185 2.7149 33 1 3.0151 3.9858 0.2902 34 1 2.0913 -1.5003 2.1385 35 1 0.7563 -2.2707 1.2483 36 1 2.3295 -3.9685 2.1375 37 1 3.6643 -3.1979 1.2474 38 1 2.7499 -5.9979 0.7622 39 1 2.3288 -3.9667 -2.1412 40 1 3.6637 -3.1966 -1.2511 41 1 0.7557 -2.2691 -1.2500 42 1 2.0910 -1.4981 -2.1396 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9156390_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:36 Heat of formation + Delta-G solvation = -26.544281 kcal Electronic energy + Delta-G solvation = -24822.443597 eV Core-core repulsion = 21192.254628 eV Total energy + Delta-G solvation = -3630.188970 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 296.157 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -43.87527 -41.22454 -39.53967 -38.17153 -37.30445 -35.33434 -34.30141 -32.65058 -31.90739 -30.08252 -28.46721 -27.69569 -26.76853 -24.58278 -23.83727 -22.70383 -21.98332 -20.74100 -20.34092 -18.81954 -18.21975 -17.90023 -17.66364 -17.32330 -17.05604 -16.37731 -16.13797 -15.82298 -15.64068 -15.53394 -14.95819 -14.82514 -14.75255 -14.23460 -14.08696 -14.02190 -13.64331 -13.49576 -13.39897 -13.35696 -13.25370 -12.83678 -12.59421 -12.38680 -12.21485 -12.18756 -11.86034 -11.63080 -11.26766 -11.24073 -11.04267 -10.77393 -10.20133 -9.97256 -9.68241 -4.89563 0.42357 0.81074 1.21494 1.51687 1.65518 1.87570 1.98062 2.24233 3.08329 3.20932 3.27820 3.34513 3.56545 3.66501 3.87331 4.00868 4.09707 4.17102 4.22748 4.30655 4.31389 4.35567 4.36964 4.43125 4.43938 4.49273 4.61981 4.65017 4.69004 4.71218 4.84396 4.90372 4.97844 5.02994 5.06499 5.09678 5.24025 5.24334 5.34162 5.52446 5.72078 6.21818 6.28261 6.75392 6.88852 7.04653 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.596 5.596 3 C 0.595 3.405 4 O -0.570 6.570 5 C -0.039 4.039 6 N -0.254 5.254 7 N -0.267 5.267 8 C 0.078 3.922 9 C -0.011 4.011 10 C -0.043 4.043 11 O -0.537 6.537 12 Si 0.778 3.222 13 C -0.188 4.188 14 C 0.136 3.864 15 H 0.078 0.922 16 C -0.117 4.117 17 C -0.144 4.144 18 C 0.105 3.895 19 H 0.072 0.928 20 O -0.589 6.589 21 C -0.111 4.111 22 C -0.113 4.113 23 H 0.059 0.941 24 H 0.089 0.911 25 H 0.091 0.909 26 H 0.101 0.899 27 H 0.115 0.885 28 H 0.103 0.897 29 H 0.145 0.855 30 H 0.388 0.612 31 H -0.283 1.283 32 H -0.294 1.294 33 H 0.179 0.821 34 H 0.062 0.938 35 H 0.087 0.913 36 H 0.087 0.913 37 H 0.059 0.941 38 H 0.395 0.605 39 H 0.074 0.926 40 H 0.058 0.942 41 H 0.086 0.914 42 H 0.063 0.937 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.054 1.094 1.345 6.298 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.068 4.068 2 N -0.326 5.326 3 C 0.383 3.617 4 O -0.449 6.449 5 C -0.196 4.196 6 N -0.092 5.092 7 N -0.056 5.056 8 C -0.061 4.061 9 C -0.136 4.136 10 C -0.153 4.153 11 O -0.344 6.344 12 Si 0.681 3.319 13 C -0.216 4.216 14 C 0.034 3.966 15 H 0.097 0.903 16 C -0.156 4.156 17 C -0.182 4.182 18 C 0.046 3.954 19 H 0.089 0.911 20 O -0.397 6.397 21 C -0.149 4.149 22 C -0.151 4.151 23 H 0.078 0.922 24 H 0.108 0.892 25 H 0.109 0.891 26 H 0.119 0.881 27 H 0.133 0.867 28 H 0.121 0.879 29 H 0.163 0.837 30 H 0.238 0.762 31 H -0.210 1.210 32 H -0.220 1.220 33 H 0.196 0.804 34 H 0.081 0.919 35 H 0.105 0.895 36 H 0.105 0.895 37 H 0.078 0.922 38 H 0.245 0.755 39 H 0.093 0.907 40 H 0.076 0.924 41 H 0.104 0.896 42 H 0.082 0.918 Dipole moment (debyes) X Y Z Total from point charges -6.120 1.499 0.818 6.353 hybrid contribution -0.347 0.026 1.180 1.231 sum -6.467 1.525 1.998 6.938 Atomic orbital electron populations 1.22209 0.77126 1.04485 1.03023 1.47818 1.08515 1.04784 1.71530 1.17264 0.85852 0.82691 0.75891 1.90766 1.14401 1.87184 1.52503 1.21730 0.90367 0.95019 1.12498 1.73685 1.15489 1.00662 1.19399 1.45874 1.08913 1.02736 1.48077 1.22610 0.76025 1.01464 1.05991 1.22143 0.86611 0.96615 1.08243 1.24805 0.98647 0.86344 1.05497 1.86581 1.42140 1.71493 1.34192 0.93219 0.82149 0.77542 0.78987 1.21681 1.00910 0.90083 1.08928 1.21220 0.97126 0.82161 0.96138 0.90341 1.21766 1.01792 0.95370 0.96632 1.22186 1.00771 0.96150 0.99076 1.21858 0.95546 0.83539 0.94421 0.91058 1.86487 1.70910 1.31425 1.50915 1.21420 1.00600 0.94943 0.97974 1.21727 1.01631 0.94801 0.96983 0.92230 0.89221 0.89089 0.88073 0.86693 0.87889 0.83735 0.76192 1.20980 1.22041 0.80411 0.91885 0.89477 0.89491 0.92215 0.75537 0.90706 0.92364 0.89572 0.91841 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.06 8.65 127.77 1.10 1.04 16 2 N -0.60 -2.77 2.76 -826.15 -2.28 -5.05 16 3 C 0.60 6.21 7.68 86.74 0.67 6.88 16 4 O -0.57 -9.65 16.26 -3.92 -0.06 -9.71 16 5 C -0.04 -0.28 6.82 42.45 0.29 0.01 16 6 N -0.25 -0.93 8.50 -48.18 -0.41 -1.34 16 7 N -0.27 0.07 3.70 -355.91 -1.32 -1.24 16 8 C 0.08 -0.59 10.12 127.77 1.29 0.70 16 9 C -0.01 0.00 6.18 41.41 0.26 0.26 16 10 C -0.04 0.20 2.88 71.24 0.20 0.40 16 11 O -0.54 2.69 10.40 -148.98 -1.55 1.14 16 12 Si 0.78 -2.64 31.24 68.60 2.14 -0.50 16 13 C -0.19 -0.73 9.36 22.41 0.21 -0.52 16 14 C 0.14 0.44 2.51 45.00 0.11 0.56 16 15 H 0.08 0.71 6.90 -2.39 -0.02 0.69 16 16 C -0.12 0.11 5.19 30.60 0.16 0.27 16 17 C -0.14 0.22 5.54 30.59 0.17 0.39 16 18 C 0.10 -0.06 3.47 30.59 0.11 0.04 16 19 H 0.07 -0.25 8.14 -2.39 -0.02 -0.27 16 20 O -0.59 -1.16 13.32 -148.98 -1.98 -3.15 16 21 C -0.11 -0.18 5.57 30.59 0.17 -0.01 16 22 C -0.11 -0.07 5.20 30.59 0.16 0.09 16 23 H 0.06 -0.06 8.14 -2.39 -0.02 -0.08 16 24 H 0.09 -0.47 6.44 -2.39 -0.02 -0.48 16 25 H 0.09 0.05 5.36 -2.39 -0.01 0.03 16 26 H 0.10 -1.08 8.14 -2.39 -0.02 -1.10 16 27 H 0.11 -1.00 6.77 -2.39 -0.02 -1.01 16 28 H 0.10 -0.93 8.14 -2.38 -0.02 -0.95 16 29 H 0.15 -1.06 7.96 -2.39 -0.02 -1.08 16 30 H 0.39 -3.68 8.70 -74.06 -0.64 -4.32 16 31 H -0.28 -0.67 7.11 99.48 0.71 0.04 16 32 H -0.29 -0.88 7.11 99.48 0.71 -0.17 16 33 H 0.18 0.19 7.03 -2.91 -0.02 0.17 16 34 H 0.06 0.07 8.14 -2.39 -0.02 0.06 16 35 H 0.09 -0.38 6.67 -2.39 -0.02 -0.40 16 36 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 37 H 0.06 0.12 8.14 -2.38 -0.02 0.10 16 38 H 0.39 -2.50 9.08 -74.06 -0.67 -3.17 16 39 H 0.07 0.13 8.14 -2.38 -0.02 0.11 16 40 H 0.06 0.28 8.14 -2.39 -0.02 0.26 16 41 H 0.09 -0.23 7.67 -2.39 -0.02 -0.25 16 42 H 0.06 0.19 8.14 -2.39 -0.02 0.18 16 Total: 0.00 -21.04 333.56 -0.79 -21.83 By element: Atomic # 1 Polarization: -11.86 SS G_CDS: -0.23 Total: -12.09 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 4.90 Total: 10.10 kcal Atomic # 7 Polarization: -3.63 SS G_CDS: -4.01 Total: -7.63 kcal Atomic # 8 Polarization: -8.11 SS G_CDS: -3.60 Total: -11.71 kcal Atomic # 14 Polarization: -2.64 SS G_CDS: 2.14 Total: -0.50 kcal Total: -21.04 -0.79 -21.83 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9156390_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -4.715 kcal (2) G-P(sol) polarization free energy of solvation -21.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -25.753 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.791 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.829 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.544 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds