Wall clock time and date at job start Tue Mar 9 2021 12:53:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42897 * 1 3 3 Si 1.86302 * 109.47077 * 2 1 4 4 C 1.50700 * 109.46994 * 239.99916 * 2 1 3 5 5 C 1.35003 * 126.42609 * 150.02784 * 4 2 1 6 6 N 1.33585 * 108.65462 * 179.97438 * 5 4 2 7 7 C 1.32416 * 109.22297 * 359.97438 * 6 5 4 8 8 C 1.41253 * 132.11761 * 180.02562 * 7 6 5 9 9 Br 1.89094 * 120.25507 * 0.02562 * 8 7 6 10 10 C 1.35707 * 119.48745 * 179.72288 * 8 7 6 11 11 C 1.41766 * 119.53162 * 0.55110 * 10 8 7 12 12 C 1.47569 * 120.00749 * 179.72090 * 11 10 8 13 13 O 1.21588 * 119.99916 * 179.72449 * 12 11 10 14 14 N 1.34784 * 120.00226 * 359.72396 * 12 11 10 15 15 C 1.46493 * 119.99864 * 179.72980 * 14 12 11 16 16 H 1.09002 * 112.85607 * 23.79935 * 15 14 12 17 17 C 1.53780 * 113.61595 * 155.00126 * 15 14 12 18 18 C 1.53775 * 87.08209 * 89.11149 * 17 15 14 19 19 H 1.08999 * 113.61758 * 270.88153 * 18 17 15 20 20 C 1.50707 * 113.61577 * 139.98598 * 18 17 15 21 21 C 1.38246 * 119.98190 * 299.72711 * 20 18 17 22 22 C 1.38211 * 120.01055 * 179.76769 * 21 20 18 23 23 C 1.38352 * 119.98826 * 0.52819 * 22 21 20 24 24 Cl 1.73599 * 120.01567 * 179.70394 * 23 22 21 25 25 C 1.38353 * 119.97239 * 359.71901 * 23 22 21 26 26 C 1.38220 * 119.98391 * 0.02562 * 25 23 22 27 27 C 1.53776 * 87.08368 * 25.43490 * 18 17 15 28 28 C 1.36495 * 119.97838 * 359.43994 * 11 10 8 29 29 N 1.35943 * 120.50526 * 0.28257 * 28 11 10 30 30 H 0.96691 * 114.00316 * 60.00159 * 1 2 3 31 31 H 1.09007 * 109.47029 * 120.00173 * 2 1 3 32 32 H 1.48497 * 110.00009 * 60.00409 * 3 2 1 33 33 H 1.48498 * 109.99822 * 181.31910 * 3 2 1 34 34 H 1.08002 * 125.67840 * 359.93779 * 5 4 2 35 35 H 1.07995 * 120.23285 * 180.27624 * 10 8 7 36 36 H 0.97000 * 119.99339 * 0.02562 * 14 12 11 37 37 H 1.08999 * 113.61977 * 203.66338 * 17 15 14 38 38 H 1.09006 * 113.61029 * 334.56474 * 17 15 14 39 39 H 1.08005 * 119.99166 * 0.02562 * 21 20 18 40 40 H 1.08000 * 120.00467 * 180.24999 * 22 21 20 41 41 H 1.07998 * 120.00626 * 179.97438 * 25 23 22 42 42 H 1.08004 * 119.98836 * 179.97438 * 26 25 23 43 43 H 1.08997 * 113.61894 * 220.02102 * 27 18 17 44 44 H 1.09004 * 113.61608 * 89.10867 * 27 18 17 45 45 H 1.07999 * 119.74281 * 180.25137 * 28 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 3.0857 -0.4615 -1.8847 6 7 3.1769 -1.2969 -2.9232 7 6 2.1074 -2.0771 -2.9504 8 6 1.7134 -3.1142 -3.8246 9 35 2.8146 -3.6011 -5.2827 10 6 0.5414 -3.7627 -3.6064 11 6 -0.2748 -3.3816 -2.5117 12 6 -1.5542 -4.0755 -2.2684 13 8 -2.2517 -3.7519 -1.3265 14 7 -1.9496 -5.0680 -3.0901 15 6 -3.2169 -5.7608 -2.8450 16 1 -3.9235 -5.1606 -2.2716 17 6 -3.8276 -6.3929 -4.1069 18 6 -3.0125 -7.6537 -3.7743 19 1 -2.0138 -7.6558 -4.2108 20 6 -3.7617 -8.9385 -4.0179 21 6 -4.9372 -9.1927 -3.3363 22 6 -5.6273 -10.3686 -3.5627 23 6 -5.1356 -11.2964 -4.4637 24 17 -5.9977 -12.7771 -4.7430 25 6 -3.9564 -11.0437 -5.1417 26 6 -3.2700 -9.8650 -4.9183 27 6 -3.0431 -7.1913 -2.3080 28 6 0.1259 -2.3765 -1.6796 29 7 1.3026 -1.7306 -1.8945 30 1 -0.3933 0.4416 -0.7650 31 1 1.7923 -0.5139 0.8900 32 1 1.5615 2.4679 1.2085 33 1 3.5345 1.7703 -0.0321 34 1 3.8140 0.2886 -1.6140 35 1 0.2306 -4.5604 -4.2647 36 1 -1.3929 -5.3264 -3.8413 37 1 -4.9057 -6.5405 -4.0434 38 1 -3.5198 -5.9054 -5.0320 39 1 -5.3187 -8.4703 -2.6297 40 1 -6.5477 -10.5653 -3.0332 41 1 -3.5719 -11.7677 -5.8448 42 1 -2.3492 -9.6679 -5.4473 43 1 -2.1021 -7.3484 -1.7809 44 1 -3.9068 -7.5571 -1.7527 45 1 -0.4969 -2.0920 -0.8445 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9610464_12335884.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:39 Heat of formation + Delta-G solvation = 88.494088 kcal Electronic energy + Delta-G solvation = -33318.743330 eV Core-core repulsion = 28570.561830 eV Total energy + Delta-G solvation = -4748.181499 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 462.013 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -44.27971 -41.73040 -40.63670 -39.14051 -38.38335 -37.97093 -37.34402 -35.43588 -34.62478 -32.62081 -32.05067 -31.86433 -31.31029 -30.24813 -26.93533 -26.66767 -26.58547 -25.24923 -24.09736 -23.84864 -22.70738 -22.50249 -22.01203 -20.21330 -19.57641 -18.68140 -18.30992 -18.13513 -17.72323 -17.51030 -17.09354 -16.56555 -16.36822 -16.17267 -16.15171 -15.92467 -15.77685 -15.52433 -15.28771 -15.11752 -14.73173 -14.66545 -14.53698 -14.32208 -14.05750 -13.67895 -13.46664 -13.42558 -13.32454 -13.23327 -13.02120 -12.68860 -12.59048 -12.42580 -12.15203 -11.99657 -11.74085 -11.58021 -11.54175 -11.36934 -11.34154 -11.26005 -11.19093 -10.89606 -10.25285 -10.02257 -9.98144 -9.47515 -9.09575 -4.95588 -0.90377 -0.37866 0.14394 0.19989 0.34153 0.96453 1.10894 1.18305 1.40756 1.66002 1.78064 1.90520 2.00967 2.22695 2.61393 2.80063 3.06795 3.17327 3.36555 3.44635 3.47261 3.49486 3.69303 3.72697 3.83554 3.87929 3.96630 4.00173 4.11557 4.22945 4.24891 4.33890 4.38299 4.41708 4.45826 4.49738 4.67149 4.75508 4.82675 4.87678 4.91851 4.96217 5.05572 5.08122 5.15751 5.25653 5.27880 5.29882 5.48257 5.56466 5.67105 5.86717 6.32043 6.41998 6.50598 6.98822 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.043 4.043 3 Si 0.804 3.196 4 C -0.081 4.081 5 C 0.035 3.965 6 N -0.494 5.494 7 C 0.227 3.773 8 C -0.081 4.081 9 Br 0.005 6.995 10 C -0.022 4.022 11 C -0.168 4.168 12 C 0.582 3.418 13 O -0.563 6.563 14 N -0.689 5.689 15 C 0.116 3.884 16 H 0.095 0.905 17 C -0.124 4.124 18 C -0.068 4.068 19 H 0.118 0.882 20 C -0.067 4.067 21 C -0.108 4.108 22 C -0.120 4.120 23 C -0.056 4.056 24 Cl -0.085 7.085 25 C -0.120 4.120 26 C -0.106 4.106 27 C -0.144 4.144 28 C 0.160 3.840 29 N -0.356 5.356 30 H 0.396 0.604 31 H 0.120 0.880 32 H -0.287 1.287 33 H -0.267 1.267 34 H 0.207 0.793 35 H 0.187 0.813 36 H 0.416 0.584 37 H 0.103 0.897 38 H 0.092 0.908 39 H 0.148 0.852 40 H 0.137 0.863 41 H 0.138 0.862 42 H 0.152 0.848 43 H 0.070 0.930 44 H 0.099 0.901 45 H 0.194 0.806 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.165 2.016 -2.852 3.681 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.152 4.152 3 Si 0.705 3.295 4 C -0.192 4.192 5 C -0.114 4.114 6 N -0.213 5.213 7 C -0.018 4.018 8 C -0.163 4.163 9 Br 0.090 6.910 10 C -0.048 4.048 11 C -0.176 4.176 12 C 0.369 3.631 13 O -0.442 6.442 14 N -0.340 5.340 15 C 0.011 3.989 16 H 0.113 0.887 17 C -0.162 4.162 18 C -0.086 4.086 19 H 0.136 0.864 20 C -0.067 4.067 21 C -0.126 4.126 22 C -0.138 4.138 23 C -0.083 4.083 24 Cl -0.057 7.057 25 C -0.139 4.139 26 C -0.124 4.124 27 C -0.183 4.183 28 C 0.034 3.966 29 N -0.029 5.029 30 H 0.246 0.754 31 H 0.137 0.863 32 H -0.214 1.214 33 H -0.193 1.193 34 H 0.224 0.776 35 H 0.204 0.796 36 H 0.255 0.745 37 H 0.121 0.879 38 H 0.111 0.889 39 H 0.166 0.834 40 H 0.155 0.845 41 H 0.156 0.844 42 H 0.170 0.830 43 H 0.088 0.912 44 H 0.117 0.883 45 H 0.210 0.790 Dipole moment (debyes) X Y Z Total from point charges -0.086 2.236 -2.312 3.217 hybrid contribution -0.597 -1.135 0.831 1.528 sum -0.682 1.101 -1.480 1.967 Atomic orbital electron populations 1.86482 1.17083 1.81731 1.50737 1.25158 0.85187 1.11398 0.93498 0.93081 0.78608 0.72706 0.85131 1.22345 0.97997 0.96421 1.02433 1.22841 0.96603 1.00220 0.91771 1.70827 1.20118 1.08090 1.22248 1.20726 0.89818 0.99806 0.91499 1.20566 0.98588 0.99174 0.97958 1.96847 1.66746 1.90458 1.36902 1.21368 0.90063 0.97932 0.95420 1.19241 0.98205 1.00945 0.99174 1.17516 0.83959 0.79628 0.82034 1.90856 1.55815 1.66345 1.31229 1.45376 1.22970 1.34815 1.30884 1.21920 0.85295 0.92814 0.98846 0.88736 1.23397 1.01031 0.94187 0.97609 1.21677 0.99653 0.90312 0.97005 0.86416 1.19987 0.94976 0.96099 0.95648 1.21219 0.94866 0.96581 0.99887 1.21254 1.01109 0.93763 0.97696 1.21180 0.96040 0.89483 1.01569 1.98382 1.76843 1.34753 1.95674 1.21285 0.93739 0.98889 0.99938 1.21318 1.00537 0.92439 0.98073 1.23592 1.03588 0.94946 0.96154 1.22264 0.84985 0.90391 0.98946 1.42702 1.15053 1.24043 1.21115 0.75408 0.86291 1.21366 1.19259 0.77621 0.79597 0.74534 0.87884 0.88929 0.83411 0.84465 0.84378 0.83000 0.91163 0.88253 0.78961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.61 10.90 -148.98 -1.62 -0.02 16 2 C -0.04 0.14 3.06 71.24 0.22 0.36 16 3 Si 0.80 -4.69 31.34 68.60 2.15 -2.54 16 4 C -0.08 -0.02 6.24 41.01 0.26 0.23 16 5 C 0.04 0.07 10.44 83.68 0.87 0.95 16 6 N -0.49 -3.58 11.30 -194.11 -2.19 -5.77 16 7 C 0.23 1.11 7.59 134.19 1.02 2.13 16 8 C -0.08 -0.08 6.24 22.42 0.14 0.06 16 9 Br 0.01 0.00 33.72 -20.37 -0.69 -0.68 16 10 C -0.02 0.10 9.26 22.56 0.21 0.31 16 11 C -0.17 0.36 5.84 -20.35 -0.12 0.24 16 12 C 0.58 -0.55 7.76 86.70 0.67 0.12 16 13 O -0.56 -3.92 15.87 -3.99 -0.06 -3.98 16 14 N -0.69 5.01 5.21 -443.16 -2.31 2.70 16 15 C 0.12 -0.78 4.33 45.52 0.20 -0.58 16 16 H 0.09 -0.25 7.46 -2.39 -0.02 -0.27 16 17 C -0.12 1.25 7.29 31.12 0.23 1.47 16 18 C -0.07 0.64 3.85 -11.02 -0.04 0.60 16 19 H 0.12 -1.48 8.10 -2.39 -0.02 -1.50 16 20 C -0.07 0.35 5.29 -19.86 -0.11 0.24 16 21 C -0.11 0.41 8.62 22.27 0.19 0.60 16 22 C -0.12 0.07 9.83 22.29 0.22 0.29 16 23 C -0.06 -0.09 6.32 22.32 0.14 0.05 16 24 Cl -0.09 -0.30 28.96 -2.72 -0.08 -0.37 16 25 C -0.12 0.10 9.83 22.29 0.22 0.32 16 26 C -0.11 0.45 9.71 22.26 0.22 0.67 16 27 C -0.14 1.02 7.25 31.12 0.23 1.24 16 28 C 0.16 0.04 9.91 83.65 0.83 0.87 16 29 N -0.36 -0.75 2.93 -337.72 -0.99 -1.74 16 30 H 0.40 -3.86 8.70 -74.06 -0.64 -4.50 16 31 H 0.12 -0.32 7.96 -2.38 -0.02 -0.34 16 32 H -0.29 -0.30 7.11 99.48 0.71 0.41 16 33 H -0.27 0.71 6.80 99.48 0.68 1.39 16 34 H 0.21 -0.59 6.70 -2.91 -0.02 -0.61 16 35 H 0.19 -2.30 6.44 -2.91 -0.02 -2.32 16 36 H 0.42 -5.49 6.73 -92.71 -0.62 -6.11 16 37 H 0.10 -1.00 7.73 -2.39 -0.02 -1.01 16 38 H 0.09 -1.10 8.14 -2.38 -0.02 -1.12 16 39 H 0.15 -1.11 6.64 -2.91 -0.02 -1.12 16 40 H 0.14 -0.30 8.06 -2.91 -0.02 -0.33 16 41 H 0.14 -0.37 8.06 -2.91 -0.02 -0.39 16 42 H 0.15 -1.36 8.06 -2.91 -0.02 -1.38 16 43 H 0.07 -0.36 8.14 -2.39 -0.02 -0.38 16 44 H 0.10 -0.71 6.30 -2.38 -0.02 -0.72 16 45 H 0.19 0.11 6.19 -2.91 -0.02 0.09 16 Total: 0.00 -22.06 412.21 -0.37 -22.43 By element: Atomic # 1 Polarization: -20.05 SS G_CDS: -0.16 Total: -20.21 kcal Atomic # 6 Polarization: 4.60 SS G_CDS: 5.59 Total: 10.18 kcal Atomic # 7 Polarization: 0.69 SS G_CDS: -5.50 Total: -4.81 kcal Atomic # 8 Polarization: -2.31 SS G_CDS: -1.69 Total: -4.00 kcal Atomic # 14 Polarization: -4.69 SS G_CDS: 2.15 Total: -2.54 kcal Atomic # 17 Polarization: -0.30 SS G_CDS: -0.08 Total: -0.37 kcal Atomic # 35 Polarization: 0.00 SS G_CDS: -0.69 Total: -0.68 kcal Total: -22.06 -0.37 -22.43 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9610464_12335884.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 110.920 kcal (2) G-P(sol) polarization free energy of solvation -22.055 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 88.865 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.370 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.426 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.494 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.15 seconds