Wall clock time and date at job start Tue Mar 9 2021 12:53:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.38213 * 119.99823 * 2 1 4 4 C 1.38256 * 119.99527 * 179.97438 * 3 2 1 5 5 C 1.50704 * 119.99542 * 180.02562 * 4 3 2 6 6 H 1.08999 * 112.85056 * 348.80263 * 5 4 3 7 7 C 1.53777 * 113.61710 * 120.00311 * 5 4 3 8 8 C 1.53774 * 87.08399 * 140.06008 * 7 5 4 9 9 H 1.08998 * 113.61946 * 219.92992 * 8 7 5 10 10 N 1.46505 * 113.61266 * 89.11813 * 8 7 5 11 11 C 1.34768 * 120.00285 * 156.52748 * 10 8 7 12 12 O 1.21577 * 120.00023 * 0.02562 * 11 10 8 13 13 C 1.47711 * 120.00405 * 179.97438 * 11 10 8 14 14 N 1.31810 * 126.51286 * 359.96451 * 13 11 10 15 15 N 1.28469 * 110.07188 * 180.02562 * 14 13 11 16 16 C 1.46500 * 124.88561 * 180.02562 * 15 14 13 17 17 C 1.35033 * 110.23234 * 0.02562 * 15 14 13 18 18 C 1.50699 * 126.38742 * 179.97438 * 17 15 14 19 19 O 1.42895 * 109.47034 * 329.99190 * 18 17 15 20 20 Si 1.86306 * 109.46748 * 209.99897 * 18 17 15 21 21 C 1.35365 * 107.22837 * 359.97438 * 17 15 14 22 22 C 1.53782 * 87.17560 * 334.52817 * 8 7 5 23 23 C 1.38207 * 120.00523 * 0.28185 * 4 3 2 24 24 C 1.38261 * 119.99789 * 359.51089 * 23 4 3 25 25 C 1.38210 * 119.99966 * 0.46460 * 24 23 4 26 26 H 1.08991 * 109.47456 * 89.99877 * 1 2 3 27 27 H 1.09004 * 109.46702 * 209.99505 * 1 2 3 28 28 H 1.09000 * 109.47114 * 329.98975 * 1 2 3 29 29 H 1.07993 * 119.99814 * 0.02562 * 3 2 1 30 30 H 1.09007 * 113.61110 * 25.51153 * 7 5 4 31 31 H 1.08994 * 113.69065 * 254.62910 * 7 5 4 32 32 H 0.97000 * 119.99761 * 336.52730 * 10 8 7 33 33 H 1.09004 * 109.46626 * 269.97238 * 16 15 14 34 34 H 1.08997 * 109.47132 * 29.97357 * 16 15 14 35 35 H 1.09004 * 109.47031 * 149.97696 * 16 15 14 36 36 H 1.08993 * 109.47565 * 90.00283 * 18 17 15 37 37 H 0.96693 * 114.00616 * 300.00459 * 19 18 17 38 38 H 1.48493 * 110.00312 * 58.68193 * 20 18 17 39 39 H 1.48505 * 109.99802 * 179.97438 * 20 18 17 40 40 H 1.08005 * 127.25194 * 179.73714 * 21 17 15 41 41 H 1.08995 * 113.61776 * 140.01935 * 22 8 7 42 42 H 1.09001 * 113.60983 * 270.92348 * 22 8 7 43 43 H 1.07997 * 120.00458 * 179.72555 * 23 4 3 44 44 H 1.08002 * 120.00341 * 180.25489 * 24 23 4 45 45 H 1.08001 * 120.00554 * 179.79027 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1981 1.1970 0.0000 4 6 3.5806 1.1969 0.0005 5 6 4.3341 2.5021 0.0011 6 1 3.6925 3.3613 -0.1940 7 6 5.2518 2.6831 1.2217 8 6 6.2800 3.2995 0.2586 9 1 7.3073 2.9999 0.4663 10 7 6.1327 4.7474 0.0911 11 6 7.1840 5.4900 -0.3085 12 8 8.2546 4.9583 -0.5303 13 6 7.0353 6.9498 -0.4780 14 7 5.9404 7.6553 -0.2761 15 7 6.1649 8.8968 -0.5182 16 6 5.1720 9.9671 -0.3969 17 6 7.4479 9.0734 -0.9005 18 6 8.0984 10.3813 -1.2712 19 8 7.1194 11.2580 -1.8324 20 14 9.4449 10.0728 -2.5212 21 6 8.0409 7.8566 -0.8888 22 6 5.6127 2.4791 -0.8579 23 6 4.2717 0.0000 -0.0048 24 6 3.5804 -1.1973 -0.0005 25 6 2.1984 -1.1974 -0.0005 26 1 -0.3634 0.0000 -1.0276 27 1 -0.3633 -0.8901 0.5138 28 1 -0.3633 0.8899 0.5140 29 1 1.6580 2.1322 0.0004 30 1 5.5784 1.7426 1.6657 31 1 4.8665 3.3877 1.9586 32 1 5.2785 5.1716 0.2677 33 1 4.6534 10.0909 -1.3476 34 1 4.4515 9.7081 0.3790 35 1 5.6723 10.8986 -0.1319 36 1 8.5278 10.8390 -0.3801 37 1 6.6947 10.9143 -2.6302 38 1 8.8776 9.4200 -3.7283 39 1 10.0939 11.3550 -2.8955 40 1 9.0646 7.6258 -1.1440 41 1 5.5176 3.0196 -1.7996 42 1 6.0379 1.4831 -0.9814 43 1 5.3517 0.0000 -0.0089 44 1 4.1204 -2.1327 -0.0005 45 1 1.6583 -2.1327 -0.0005 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9650858_13259642.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:49 Heat of formation + Delta-G solvation = 65.874863 kcal Electronic energy + Delta-G solvation = -26836.077783 eV Core-core repulsion = 23015.674039 eV Total energy + Delta-G solvation = -3820.403745 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.157 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -43.85559 -41.52391 -40.26293 -38.83790 -38.16449 -34.87046 -34.33626 -33.33103 -32.61467 -31.79011 -28.66277 -27.78663 -26.91470 -26.68906 -26.13027 -24.31364 -23.05327 -22.23488 -21.96196 -21.08797 -19.84168 -19.21617 -17.87935 -17.64939 -17.44266 -17.15935 -16.98731 -16.39245 -16.18085 -15.99298 -15.72213 -15.65066 -15.33506 -14.91737 -14.83843 -14.72735 -14.38461 -14.08617 -13.99570 -13.82479 -13.60864 -13.43655 -13.41157 -13.03967 -12.77887 -12.70064 -12.68644 -12.28562 -12.16086 -12.00493 -11.72410 -11.65650 -11.32491 -11.17097 -11.08593 -10.31417 -10.02578 -9.98213 -9.67616 -9.43963 -4.89117 0.41000 0.43307 0.48911 0.81419 1.21650 1.53399 1.67181 1.93562 2.06717 2.27304 2.79439 3.08788 3.29426 3.34171 3.45275 3.67574 3.70378 3.92176 3.98659 4.00829 4.07218 4.18751 4.26870 4.28795 4.34871 4.43529 4.48310 4.49508 4.55090 4.62468 4.65343 4.69275 4.76419 4.76732 4.78855 4.84693 4.91873 4.99785 5.02441 5.13856 5.18766 5.24869 5.30459 5.51234 5.59238 5.66323 5.70897 5.75053 6.14114 6.27060 6.36198 6.80045 7.09389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.115 4.115 2 C -0.098 4.098 3 C -0.131 4.131 4 C -0.073 4.073 5 C -0.067 4.067 6 H 0.102 0.898 7 C -0.123 4.123 8 C 0.116 3.884 9 H 0.095 0.905 10 N -0.691 5.691 11 C 0.606 3.394 12 O -0.563 6.563 13 C -0.040 4.040 14 N -0.265 5.265 15 N -0.264 5.264 16 C 0.077 3.923 17 C -0.013 4.013 18 C -0.044 4.044 19 O -0.537 6.537 20 Si 0.782 3.218 21 C -0.187 4.187 22 C -0.140 4.140 23 C -0.132 4.132 24 C -0.124 4.124 25 C -0.140 4.140 26 H 0.074 0.926 27 H 0.072 0.928 28 H 0.071 0.929 29 H 0.129 0.871 30 H 0.105 0.895 31 H 0.084 0.916 32 H 0.414 0.586 33 H 0.100 0.900 34 H 0.101 0.899 35 H 0.117 0.883 36 H 0.146 0.854 37 H 0.388 0.612 38 H -0.295 1.295 39 H -0.284 1.284 40 H 0.182 0.818 41 H 0.064 0.936 42 H 0.102 0.898 43 H 0.134 0.866 44 H 0.135 0.865 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.786 2.569 1.321 4.013 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.172 4.172 2 C -0.098 4.098 3 C -0.149 4.149 4 C -0.073 4.073 5 C -0.085 4.085 6 H 0.120 0.880 7 C -0.160 4.160 8 C 0.010 3.990 9 H 0.113 0.887 10 N -0.342 5.342 11 C 0.392 3.608 12 O -0.440 6.440 13 C -0.198 4.198 14 N -0.103 5.103 15 N -0.054 5.054 16 C -0.061 4.061 17 C -0.138 4.138 18 C -0.154 4.154 19 O -0.345 6.345 20 Si 0.685 3.315 21 C -0.214 4.214 22 C -0.179 4.179 23 C -0.150 4.150 24 C -0.142 4.142 25 C -0.158 4.158 26 H 0.092 0.908 27 H 0.091 0.909 28 H 0.090 0.910 29 H 0.147 0.853 30 H 0.123 0.877 31 H 0.102 0.898 32 H 0.251 0.749 33 H 0.118 0.882 34 H 0.120 0.880 35 H 0.135 0.865 36 H 0.164 0.836 37 H 0.238 0.762 38 H -0.222 1.222 39 H -0.210 1.210 40 H 0.199 0.801 41 H 0.082 0.918 42 H 0.120 0.880 43 H 0.152 0.848 44 H 0.153 0.847 45 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -2.795 2.718 1.214 4.083 hybrid contribution -0.805 0.311 -0.722 1.125 sum -3.599 3.029 0.491 4.730 Atomic orbital electron populations 1.20835 0.90149 1.03420 1.02799 1.20222 0.97111 0.93299 0.99120 1.21155 0.93900 0.98075 1.01785 1.19823 0.93505 0.94872 0.99110 1.21599 0.94747 0.94901 0.97233 0.88013 1.23348 0.94649 1.02052 0.95990 1.21922 1.00534 0.79003 0.97491 0.88716 1.45459 1.13604 1.07499 1.67591 1.17033 0.83694 0.84044 0.76033 1.90789 1.28056 1.72775 1.52364 1.21788 0.92506 0.94501 1.11018 1.73463 1.25546 0.91736 1.19576 1.45697 1.09732 1.05444 1.44495 1.22614 0.90873 0.86931 1.05695 1.22184 0.86547 0.98440 1.06626 1.24843 0.97440 0.85899 1.07227 1.86577 1.55419 1.45784 1.46703 0.93229 0.80987 0.80675 0.76585 1.21726 1.01857 0.90014 1.07829 1.23594 0.95617 1.01163 0.97514 1.21205 1.00644 0.91940 1.01203 1.21406 0.94522 0.98792 0.99434 1.21306 0.94748 0.98123 1.01615 0.90774 0.90950 0.90961 0.85323 0.87678 0.89779 0.74912 0.88173 0.87994 0.86499 0.83618 0.76204 1.22163 1.21037 0.80070 0.91763 0.88018 0.84835 0.84714 0.85182 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 0.12 10.01 71.24 0.71 0.83 16 2 C -0.10 -0.27 5.88 -19.86 -0.12 -0.39 16 3 C -0.13 -0.34 9.37 22.27 0.21 -0.13 16 4 C -0.07 -0.14 5.29 -19.87 -0.11 -0.24 16 5 C -0.07 0.06 3.87 -10.92 -0.04 0.02 16 6 H 0.10 -0.21 8.09 -2.39 -0.02 -0.23 16 7 C -0.12 0.24 7.29 31.12 0.23 0.47 16 8 C 0.12 0.18 4.30 45.51 0.20 0.38 16 9 H 0.09 0.42 7.50 -2.39 -0.02 0.41 16 10 N -0.69 -2.16 5.26 -443.04 -2.33 -4.49 16 11 C 0.61 5.29 7.82 86.75 0.68 5.97 16 12 O -0.56 -8.36 16.54 -3.96 -0.07 -8.43 16 13 C -0.04 -0.27 7.13 42.46 0.30 0.03 16 14 N -0.27 -1.15 11.67 -48.17 -0.56 -1.71 16 15 N -0.26 -0.09 3.70 -355.92 -1.32 -1.40 16 16 C 0.08 -0.53 10.12 127.77 1.29 0.77 16 17 C -0.01 0.00 6.18 41.40 0.26 0.26 16 18 C -0.04 0.21 2.88 71.24 0.20 0.41 16 19 O -0.54 2.56 10.40 -148.98 -1.55 1.01 16 20 Si 0.78 -2.82 31.23 68.60 2.14 -0.68 16 21 C -0.19 -0.62 9.35 22.41 0.21 -0.41 16 22 C -0.14 -0.09 7.27 31.21 0.23 0.13 16 23 C -0.13 -0.24 8.63 22.27 0.19 -0.04 16 24 C -0.12 -0.27 10.05 22.27 0.22 -0.05 16 25 C -0.14 -0.38 9.70 22.27 0.22 -0.17 16 26 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 27 H 0.07 -0.16 8.09 -2.39 -0.02 -0.18 16 28 H 0.07 -0.17 8.09 -2.39 -0.02 -0.19 16 29 H 0.13 -0.03 8.05 -2.91 -0.02 -0.06 16 30 H 0.10 -0.29 7.73 -2.38 -0.02 -0.31 16 31 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 32 H 0.41 0.01 8.43 -92.71 -0.78 -0.77 16 33 H 0.10 -0.96 8.14 -2.38 -0.02 -0.98 16 34 H 0.10 -0.82 8.14 -2.39 -0.02 -0.84 16 35 H 0.12 -0.96 6.77 -2.39 -0.02 -0.98 16 36 H 0.15 -1.11 7.96 -2.39 -0.02 -1.13 16 37 H 0.39 -3.52 8.70 -74.06 -0.64 -4.17 16 38 H -0.29 -0.88 7.11 99.48 0.71 -0.18 16 39 H -0.28 -0.62 7.11 99.48 0.71 0.08 16 40 H 0.18 0.01 7.02 -2.91 -0.02 -0.01 16 41 H 0.06 0.20 8.14 -2.39 -0.02 0.18 16 42 H 0.10 -0.04 6.32 -2.39 -0.02 -0.06 16 43 H 0.13 -0.17 6.65 -2.91 -0.02 -0.19 16 44 H 0.13 -0.18 8.06 -2.91 -0.02 -0.20 16 45 H 0.13 -0.03 8.06 -2.91 -0.02 -0.06 16 Total: 0.00 -18.96 374.37 0.84 -18.12 By element: Atomic # 1 Polarization: -9.90 SS G_CDS: -0.36 Total: -10.26 kcal Atomic # 6 Polarization: 2.96 SS G_CDS: 4.88 Total: 7.84 kcal Atomic # 7 Polarization: -3.40 SS G_CDS: -4.21 Total: -7.60 kcal Atomic # 8 Polarization: -5.80 SS G_CDS: -1.62 Total: -7.41 kcal Atomic # 14 Polarization: -2.82 SS G_CDS: 2.14 Total: -0.68 kcal Total: -18.96 0.84 -18.12 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9650858_13259642.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 83.996 kcal (2) G-P(sol) polarization free energy of solvation -18.960 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.036 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.121 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.875 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds