Wall clock time and date at job start Tue Mar 9 2021 12:53:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86293 * 109.47041 * 2 1 4 4 C 1.50699 * 109.47152 * 239.99653 * 2 1 3 5 5 C 1.35004 * 126.42842 * 150.02797 * 4 2 1 6 6 N 1.33580 * 108.65557 * 179.97438 * 5 4 2 7 7 C 1.32415 * 109.22717 * 0.02562 * 6 5 4 8 8 C 1.41244 * 132.11815 * 180.02562 * 7 6 5 9 9 Br 1.89101 * 120.25452 * 359.96697 * 8 7 6 10 10 C 1.35709 * 119.49036 * 179.97438 * 8 7 6 11 11 C 1.41763 * 119.53106 * 359.97438 * 10 8 7 12 12 C 1.47575 * 120.01049 * 179.97438 * 11 10 8 13 13 O 1.21591 * 120.00002 * 179.97438 * 12 11 10 14 14 N 1.34774 * 119.99800 * 359.97438 * 12 11 10 15 15 C 1.46499 * 120.00287 * 180.02562 * 14 12 11 16 16 H 1.09009 * 112.84551 * 23.80442 * 15 14 12 17 17 C 1.53780 * 113.61797 * 154.99826 * 15 14 12 18 18 C 1.53785 * 87.07989 * 89.11797 * 17 15 14 19 19 H 1.08994 * 113.61180 * 270.80020 * 18 17 15 20 20 C 1.50695 * 113.61247 * 139.97824 * 18 17 15 21 21 C 1.38230 * 119.96784 * 120.00242 * 20 18 17 22 22 C 1.38234 * 120.04429 * 179.97438 * 21 20 18 23 23 C 1.38410 * 119.98331 * 0.02562 * 22 21 20 24 24 F 1.35102 * 120.02724 * 179.97438 * 23 22 21 25 25 C 1.38567 * 119.94026 * 359.97438 * 23 22 21 26 26 Br 1.89101 * 120.01795 * 180.02562 * 25 23 22 27 27 C 1.38251 * 119.95820 * 359.72823 * 25 23 22 28 28 C 1.53783 * 113.61349 * 252.50102 * 15 14 12 29 29 C 1.36504 * 119.97951 * 0.02562 * 11 10 8 30 30 N 1.35949 * 120.50762 * 359.72774 * 29 11 10 31 31 H 0.96700 * 114.00311 * 300.00531 * 1 2 3 32 32 H 1.09008 * 109.46477 * 119.99697 * 2 1 3 33 33 H 1.48506 * 109.99973 * 299.99283 * 3 2 1 34 34 H 1.48493 * 110.00375 * 61.31384 * 3 2 1 35 35 H 1.08003 * 125.66764 * 359.94381 * 5 4 2 36 36 H 1.07994 * 120.23293 * 180.02562 * 10 8 7 37 37 H 0.97001 * 119.99935 * 0.02562 * 14 12 11 38 38 H 1.08996 * 113.61132 * 203.66634 * 17 15 14 39 39 H 1.08994 * 113.61288 * 334.48593 * 17 15 14 40 40 H 1.08004 * 119.97561 * 359.97438 * 21 20 18 41 41 H 1.07994 * 120.00890 * 179.97438 * 22 21 20 42 42 H 1.07999 * 119.99561 * 180.27278 * 27 25 23 43 43 H 1.08995 * 113.61630 * 25.42964 * 28 15 14 44 44 H 1.08998 * 113.61013 * 156.33338 * 28 15 14 45 45 H 1.08001 * 119.74231 * 180.02562 * 29 11 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9314 -0.7105 -1.2304 5 6 3.0858 -0.4616 -1.8847 6 7 3.1770 -1.2970 -2.9230 7 6 2.1070 -2.0765 -2.9509 8 6 1.7129 -3.1133 -3.8254 9 35 2.8139 -3.5997 -5.2839 10 6 0.5379 -3.7576 -3.6110 11 6 -0.2754 -3.3807 -2.5127 12 6 -1.5554 -4.0739 -2.2700 13 8 -2.2526 -3.7508 -1.3277 14 7 -1.9516 -5.0650 -3.0929 15 6 -3.2226 -5.7527 -2.8524 16 1 -3.9289 -5.1495 -2.2819 17 6 -3.8310 -6.3827 -4.1164 18 6 -3.0222 -7.6468 -3.7803 19 1 -2.0224 -7.6536 -4.2142 20 6 -3.7756 -8.9286 -4.0262 21 6 -3.2841 -9.8569 -4.9247 22 6 -3.9737 -11.0334 -5.1511 23 6 -5.1573 -11.2819 -4.4780 24 9 -5.8322 -12.4312 -4.6990 25 6 -5.6494 -10.3508 -3.5775 26 35 -7.2659 -10.6884 -2.6562 27 6 -4.9546 -9.1777 -3.3484 28 6 -3.0565 -7.1837 -2.3143 29 6 0.1254 -2.3758 -1.6804 30 7 1.3048 -1.7335 -1.8919 31 1 -0.3934 0.4418 0.7650 32 1 1.7923 -0.5138 0.8901 33 1 1.5616 2.4678 -1.2086 34 1 1.5878 2.4586 1.2241 35 1 3.8141 0.2885 -1.6138 36 1 0.2250 -4.5523 -4.2719 37 1 -1.3953 -5.3229 -3.8444 38 1 -4.9099 -6.5260 -4.0568 39 1 -3.5190 -5.8960 -5.0403 40 1 -2.3608 -9.6629 -5.4503 41 1 -3.5894 -11.7581 -5.8535 42 1 -5.3353 -8.4536 -2.6433 43 1 -2.1181 -7.3444 -1.7836 44 1 -3.9236 -7.5459 -1.7621 45 1 -0.4970 -2.0921 -0.8446 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_9650940_12335884.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:53 Heat of formation + Delta-G solvation = 53.457185 kcal Electronic energy + Delta-G solvation = -35665.759341 eV Core-core repulsion = 30466.586342 eV Total energy + Delta-G solvation = -5199.172999 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 523.953 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -50.01393 -44.20504 -41.90377 -40.71711 -39.14664 -38.41469 -38.01902 -35.46846 -34.73662 -33.62112 -32.61217 -31.96900 -31.49539 -30.45169 -30.22973 -26.99745 -26.97912 -26.70292 -25.36623 -24.16133 -24.05874 -22.82162 -22.49832 -22.01207 -20.49926 -19.33180 -18.92075 -18.87344 -18.60183 -17.92250 -17.80749 -17.41512 -17.37401 -16.80528 -16.76059 -16.37292 -16.32333 -16.01190 -15.73434 -15.64743 -15.54190 -15.13299 -14.84921 -14.80316 -14.60394 -14.46722 -14.21650 -14.15765 -14.04665 -13.72531 -13.46605 -13.44670 -13.29717 -12.96080 -12.87537 -12.57123 -12.22903 -12.19951 -12.19147 -11.73295 -11.54555 -11.52264 -11.41338 -11.35073 -11.31584 -11.22390 -10.98903 -10.35667 -10.11104 -9.98728 -9.67664 -9.02849 -5.14636 -0.84943 -0.37553 -0.26541 -0.11617 0.21998 0.42922 0.86246 1.18996 1.31740 1.48559 1.80371 1.82992 1.88800 2.17138 2.25694 2.69349 2.85184 2.96189 3.11361 3.15911 3.33222 3.35401 3.40616 3.44595 3.47217 3.50145 3.66147 3.82783 3.86945 3.90926 4.02624 4.02810 4.13357 4.25881 4.27244 4.41677 4.44221 4.47484 4.48704 4.61386 4.65299 4.70039 4.71033 4.79064 4.84813 4.91657 4.99550 5.18508 5.28654 5.34153 5.51157 5.61171 6.09055 6.15978 6.53271 6.89579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.046 4.046 3 Si 0.713 3.287 4 C -0.039 4.039 5 C 0.049 3.951 6 N -0.459 5.459 7 C 0.242 3.758 8 C -0.063 4.063 9 Br 0.008 6.992 10 C -0.042 4.042 11 C -0.180 4.180 12 C 0.582 3.418 13 O -0.526 6.526 14 N -0.705 5.705 15 C 0.120 3.880 16 H 0.111 0.889 17 C -0.136 4.136 18 C -0.073 4.073 19 H 0.104 0.896 20 C -0.077 4.077 21 C -0.070 4.070 22 C -0.144 4.144 23 C 0.123 3.877 24 F -0.123 7.123 25 C -0.128 4.128 26 Br -0.026 7.026 27 C -0.061 4.061 28 C -0.145 4.145 29 C 0.178 3.822 30 N -0.353 5.353 31 H 0.391 0.609 32 H 0.087 0.913 33 H -0.250 1.250 34 H -0.252 1.252 35 H 0.198 0.802 36 H 0.153 0.847 37 H 0.402 0.598 38 H 0.102 0.898 39 H 0.082 0.918 40 H 0.140 0.860 41 H 0.146 0.854 42 H 0.144 0.856 43 H 0.079 0.921 44 H 0.098 0.902 45 H 0.192 0.808 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.937 1.377 0.752 3.330 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.353 6.353 2 C -0.155 4.155 3 Si 0.611 3.389 4 C -0.150 4.150 5 C -0.101 4.101 6 N -0.177 5.177 7 C -0.003 4.003 8 C -0.146 4.146 9 Br 0.094 6.906 10 C -0.068 4.068 11 C -0.187 4.187 12 C 0.368 3.632 13 O -0.402 6.402 14 N -0.357 5.357 15 C 0.015 3.985 16 H 0.129 0.871 17 C -0.174 4.174 18 C -0.092 4.092 19 H 0.123 0.877 20 C -0.078 4.078 21 C -0.089 4.089 22 C -0.163 4.163 23 C 0.102 3.898 24 F -0.102 7.102 25 C -0.209 4.209 26 Br 0.060 6.940 27 C -0.081 4.081 28 C -0.184 4.184 29 C 0.051 3.949 30 N -0.026 5.026 31 H 0.241 0.759 32 H 0.104 0.896 33 H -0.174 1.174 34 H -0.177 1.177 35 H 0.214 0.786 36 H 0.171 0.829 37 H 0.238 0.762 38 H 0.120 0.880 39 H 0.100 0.900 40 H 0.158 0.842 41 H 0.164 0.836 42 H 0.161 0.839 43 H 0.098 0.902 44 H 0.116 0.884 45 H 0.208 0.792 Dipole moment (debyes) X Y Z Total from point charges 2.762 1.828 0.176 3.317 hybrid contribution -1.519 -0.543 0.744 1.777 sum 1.243 1.286 0.920 2.011 Atomic orbital electron populations 1.86471 1.17537 1.80551 1.50760 1.24470 0.84615 1.11245 0.95129 0.94657 0.90986 0.72112 0.81194 1.20900 0.97428 0.95758 1.00915 1.22360 0.95897 1.00069 0.91802 1.70870 1.19222 1.07011 1.20594 1.20403 0.89883 0.99500 0.90557 1.20425 0.97671 0.98744 0.97717 1.96854 1.66284 1.90549 1.36937 1.21047 0.91433 0.98316 0.95990 1.19201 0.98519 1.01659 0.99341 1.17464 0.84216 0.79268 0.82264 1.90855 1.54815 1.64978 1.29581 1.45462 1.22709 1.36237 1.31281 1.21895 0.85579 0.93113 0.97904 0.87099 1.23466 1.01067 0.94798 0.98086 1.21639 0.98994 0.90679 0.97854 0.87742 1.19729 0.94953 0.96328 0.96770 1.21094 0.99483 0.92007 0.96294 1.21207 0.94061 0.99592 1.01476 1.17443 0.92210 0.82982 0.97174 1.91582 1.79073 1.46279 1.93235 1.21982 0.97530 0.98777 1.02609 1.96838 1.26608 1.95946 1.74640 1.20890 0.93799 0.94739 0.98637 1.23607 1.04004 0.95258 0.95489 1.22100 0.84884 0.89283 0.98604 1.42584 1.14885 1.23993 1.21145 0.75910 0.89569 1.17382 1.17675 0.78551 0.82918 0.76198 0.88008 0.89981 0.84177 0.83602 0.83869 0.90199 0.88382 0.79157 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.48 10.88 -35.23 -0.38 0.10 16 2 C -0.05 0.08 3.05 36.01 0.11 0.19 16 3 Si 0.71 -1.98 31.18 -169.99 -5.30 -7.28 16 4 C -0.04 -0.04 6.28 -81.43 -0.51 -0.55 16 5 C 0.05 0.04 10.44 -17.94 -0.19 -0.15 16 6 N -0.46 -1.63 11.30 -12.70 -0.14 -1.77 16 7 C 0.24 0.73 7.59 -155.91 -1.18 -0.45 16 8 C -0.06 -0.08 6.24 -39.35 -0.25 -0.32 16 9 Br 0.01 0.01 33.72 -68.01 -2.29 -2.29 16 10 C -0.04 0.05 9.26 -39.14 -0.36 -0.32 16 11 C -0.18 -0.02 5.84 -105.37 -0.61 -0.63 16 12 C 0.58 0.20 7.76 -12.45 -0.10 0.11 16 13 O -0.53 -1.99 15.87 5.29 0.08 -1.91 16 14 N -0.71 1.91 5.21 -54.04 -0.28 1.63 16 15 C 0.12 -0.34 4.32 -67.12 -0.29 -0.63 16 16 H 0.11 -0.13 7.46 -51.92 -0.39 -0.51 16 17 C -0.14 0.58 7.29 -25.92 -0.19 0.39 16 18 C -0.07 0.31 3.86 -90.96 -0.35 -0.04 16 19 H 0.10 -0.58 8.09 -51.93 -0.42 -1.00 16 20 C -0.08 0.19 5.29 -104.62 -0.55 -0.36 16 21 C -0.07 0.18 9.71 -39.59 -0.38 -0.20 16 22 C -0.14 0.16 10.03 -39.52 -0.40 -0.23 16 23 C 0.12 0.13 7.27 -39.40 -0.29 -0.15 16 24 F -0.12 -0.34 16.73 2.25 0.04 -0.30 16 25 C -0.13 -0.09 6.23 -39.46 -0.25 -0.34 16 26 Br -0.03 -0.04 33.28 -68.01 -2.26 -2.30 16 27 C -0.06 0.08 8.36 -39.57 -0.33 -0.25 16 28 C -0.15 0.47 7.25 -25.92 -0.19 0.28 16 29 C 0.18 0.25 9.91 -16.35 -0.16 0.08 16 30 N -0.35 -0.78 2.93 -58.09 -0.17 -0.95 16 31 H 0.39 -1.89 8.74 45.56 0.40 -1.49 16 32 H 0.09 -0.31 7.96 -51.92 -0.41 -0.73 16 33 H -0.25 -0.31 7.11 56.52 0.40 0.09 16 34 H -0.25 0.27 7.11 56.52 0.40 0.67 16 35 H 0.20 -0.67 6.90 -52.48 -0.36 -1.03 16 36 H 0.15 -0.70 6.44 -52.49 -0.34 -1.03 16 37 H 0.40 -2.10 6.73 -40.82 -0.27 -2.38 16 38 H 0.10 -0.42 7.73 -51.93 -0.40 -0.82 16 39 H 0.08 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.14 -0.70 8.05 -52.48 -0.42 -1.12 16 41 H 0.15 -0.40 8.06 -52.49 -0.42 -0.82 16 42 H 0.14 -0.37 6.64 -52.49 -0.35 -0.72 16 43 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 44 H 0.10 -0.32 6.29 -51.93 -0.33 -0.65 16 45 H 0.19 0.26 6.19 -52.49 -0.32 -0.07 16 LS Contribution 422.88 15.07 6.37 6.37 Total: 0.00 -10.41 422.88 -14.90 -25.31 By element: Atomic # 1 Polarization: -8.96 SS G_CDS: -4.09 Total: -13.05 kcal Atomic # 6 Polarization: 2.90 SS G_CDS: -6.47 Total: -3.57 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -0.60 Total: -1.09 kcal Atomic # 8 Polarization: -1.51 SS G_CDS: -0.30 Total: -1.81 kcal Atomic # 9 Polarization: -0.34 SS G_CDS: 0.04 Total: -0.30 kcal Atomic # 14 Polarization: -1.98 SS G_CDS: -5.30 Total: -7.28 kcal Atomic # 35 Polarization: -0.03 SS G_CDS: -4.56 Total: -4.59 kcal Total LS contribution 6.37 Total: 6.37 kcal Total: -10.41 -14.90 -25.31 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9650940_12335884.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 78.763 kcal (2) G-P(sol) polarization free energy of solvation -10.407 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 68.355 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -14.898 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.305 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.457 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds