Wall clock time and date at job start Tue Mar 9 2021 12:54:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86303 * 1 3 3 C 1.86295 * 109.47058 * 2 1 4 4 C 1.86303 * 109.46984 * 239.99858 * 2 1 3 5 5 C 1.86301 * 109.47058 * 120.00188 * 2 1 3 6 6 C 1.52995 * 109.47304 * 60.00089 * 5 2 1 7 7 C 1.52999 * 109.47223 * 180.02562 * 6 5 2 8 8 N 1.46502 * 109.47152 * 179.97438 * 7 6 5 9 9 C 1.34779 * 119.99861 * 179.97438 * 8 7 6 10 10 O 1.21594 * 119.99923 * 0.02562 * 9 8 7 11 11 C 1.47572 * 119.99650 * 179.97438 * 9 8 7 12 12 C 1.36503 * 120.00563 * 179.97438 * 11 9 8 13 13 N 1.35940 * 120.50299 * 180.02562 * 12 11 9 14 14 C 1.36999 * 132.41397 * 180.02562 * 13 12 11 15 15 C 1.50701 * 126.42589 * 0.02562 * 14 13 12 16 16 O 1.42896 * 109.47417 * 330.00365 * 15 14 13 17 17 Si 1.86301 * 109.47149 * 210.00349 * 15 14 13 18 18 H 1.48506 * 109.47302 * 59.99966 * 17 15 14 19 19 H 1.48503 * 109.47334 * 300.00099 * 17 15 14 20 20 H 1.48500 * 109.47376 * 180.02562 * 17 15 14 21 21 C 1.35004 * 107.14687 * 180.28179 * 14 13 12 22 22 N 1.33587 * 108.65456 * 359.57066 * 21 14 13 23 23 C 1.32419 * 109.22142 * 0.43301 * 22 21 14 24 24 C 1.41248 * 132.11979 * 179.72854 * 23 22 21 25 25 Br 1.89101 * 120.25507 * 0.03437 * 24 23 22 26 26 C 1.35698 * 119.49061 * 180.02562 * 24 23 22 27 27 H 1.09000 * 109.46719 * 299.99885 * 1 2 3 28 28 H 1.08998 * 109.46745 * 60.00026 * 1 2 3 29 29 H 1.08996 * 109.47102 * 180.02562 * 1 2 3 30 30 H 1.09007 * 109.47300 * 180.02562 * 3 2 1 31 31 H 1.08998 * 109.47321 * 299.99622 * 3 2 1 32 32 H 1.08999 * 109.47461 * 59.99933 * 3 2 1 33 33 H 1.08993 * 109.47184 * 300.00380 * 4 2 1 34 34 H 1.09005 * 109.46676 * 60.00186 * 4 2 1 35 35 H 1.09001 * 109.46676 * 179.97438 * 4 2 1 36 36 H 1.08999 * 109.46776 * 299.99648 * 5 2 1 37 37 H 1.09007 * 109.46710 * 180.02562 * 5 2 1 38 38 H 1.09000 * 109.47365 * 59.99527 * 6 5 2 39 39 H 1.09001 * 109.46816 * 299.99574 * 6 5 2 40 40 H 1.08999 * 109.46951 * 59.99501 * 7 6 5 41 41 H 1.08995 * 109.47015 * 299.99794 * 7 6 5 42 42 H 0.97000 * 119.99826 * 359.97438 * 8 7 6 43 43 H 1.07994 * 119.74665 * 0.06874 * 12 11 9 44 44 H 1.09002 * 109.46793 * 90.00818 * 15 14 13 45 45 H 0.96708 * 114.00095 * 299.99924 * 16 15 14 46 46 H 1.08000 * 125.67691 * 179.73129 * 21 14 13 47 47 H 1.08007 * 120.23412 * 179.97438 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.4840 1.7564 0.0000 4 6 2.4840 -0.8783 -1.5212 5 6 2.4840 -0.8783 1.5211 6 6 1.9741 -2.3207 1.5211 7 6 2.4835 -3.0418 2.7706 8 7 1.9947 -4.4229 2.7709 9 6 2.3202 -5.2528 3.7818 10 8 3.0192 -4.8550 4.6938 11 6 1.8274 -6.6437 3.7823 12 6 2.1574 -7.4845 4.8058 13 7 1.7093 -8.7679 4.8162 14 6 1.8846 -9.8007 5.6991 15 6 2.6817 -9.7596 6.9775 16 8 3.7535 -8.8245 6.8407 17 14 3.3755 -11.4520 7.3313 18 1 4.2570 -11.8697 6.2116 19 1 2.2617 -12.4239 7.4735 20 1 4.1605 -11.4117 8.5913 21 6 1.2141 -10.8638 5.2064 22 7 0.6307 -10.5065 4.0589 23 6 0.9191 -9.2406 3.7989 24 6 0.5653 -8.3889 2.7291 25 35 -0.5236 -9.0288 1.3217 26 6 1.0128 -7.1078 2.7190 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.5741 1.7565 -0.0005 31 1 2.1207 2.2702 -0.8900 32 1 2.1207 2.2703 0.8899 33 1 2.1206 -1.9059 -1.5212 34 1 2.1206 -0.3644 -2.4111 35 1 3.5740 -0.8779 -1.5213 36 1 2.1207 -0.3644 2.4111 37 1 3.5741 -0.8779 1.5213 38 1 2.3373 -2.8346 0.6311 39 1 0.8841 -2.3207 1.5212 40 1 2.1199 -2.5278 3.6604 41 1 3.5735 -3.0418 2.7711 42 1 1.4368 -4.7400 2.0436 43 1 2.7785 -7.1272 5.6137 44 1 2.0346 -9.4531 7.7993 45 1 4.3705 -9.0350 6.1264 46 1 1.1565 -11.8399 5.6649 47 1 0.7500 -6.4463 1.9067 RHF calculation, no. of doubly occupied orbitals= 63 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_9704008_12335884.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:01 Heat of formation + Delta-G solvation = -26.522107 kcal Electronic energy + Delta-G solvation = -28071.108032 eV Core-core repulsion = 24038.662830 eV Total energy + Delta-G solvation = -4032.445203 eV No. of doubly occupied orbitals = 63 Molecular weight (most abundant/longest-lived isotopes) = 413.068 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -44.23315 -41.07905 -38.55216 -38.07435 -36.92038 -35.29858 -33.83503 -32.40528 -31.79219 -30.23688 -29.61390 -28.49299 -28.49236 -27.44279 -26.89715 -24.96432 -24.07651 -22.66206 -22.55026 -21.69720 -19.51346 -18.74653 -18.28294 -17.79415 -17.50167 -16.90002 -16.87283 -16.41342 -16.05468 -15.89903 -15.54534 -15.53832 -15.15312 -14.77937 -14.50585 -14.37951 -14.26602 -14.16396 -14.00325 -13.63886 -13.50948 -13.42776 -13.33488 -13.21705 -13.18619 -13.15908 -12.93276 -12.76267 -12.68958 -12.26684 -12.15460 -11.94952 -11.50528 -11.31183 -11.29994 -11.20055 -10.97065 -10.88959 -10.86667 -10.62668 -10.27290 -9.99773 -9.06485 -0.86283 -0.37555 0.21455 0.79478 1.13799 1.32479 1.33846 1.42655 1.68630 1.77532 1.79363 1.81178 1.86678 2.03718 2.28743 2.56109 2.78658 2.96846 3.14707 3.37089 3.42460 3.47283 3.82706 3.92304 3.94316 4.11058 4.16147 4.21974 4.29791 4.41196 4.48825 4.55545 4.59612 4.65068 4.67507 4.69283 4.70415 4.70565 4.71084 4.88492 4.97122 5.04493 5.18636 5.27158 5.30873 5.42797 5.48594 5.49098 5.60002 6.15754 6.25586 6.52579 6.97924 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.452 4.452 2 Si 1.013 2.987 3 C -0.453 4.453 4 C -0.452 4.452 5 C -0.411 4.411 6 C -0.123 4.123 7 C 0.119 3.881 8 N -0.723 5.723 9 C 0.574 3.426 10 O -0.528 6.528 11 C -0.172 4.172 12 C 0.164 3.836 13 N -0.353 5.353 14 C -0.086 4.086 15 C -0.052 4.052 16 O -0.540 6.540 17 Si 0.972 3.028 18 H -0.247 1.247 19 H -0.242 1.242 20 H -0.244 1.244 21 C 0.042 3.958 22 N -0.461 5.461 23 C 0.243 3.757 24 C -0.063 4.063 25 Br 0.008 6.992 26 C -0.041 4.041 27 H 0.068 0.932 28 H 0.068 0.932 29 H 0.068 0.932 30 H 0.068 0.932 31 H 0.068 0.932 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.068 0.932 35 H 0.068 0.932 36 H 0.079 0.921 37 H 0.079 0.921 38 H 0.072 0.928 39 H 0.072 0.928 40 H 0.072 0.928 41 H 0.072 0.928 42 H 0.401 0.599 43 H 0.196 0.804 44 H 0.128 0.872 45 H 0.379 0.621 46 H 0.191 0.809 47 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.498 1.864 -1.677 2.557 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.559 4.559 2 Si 1.209 2.791 3 C -0.560 4.560 4 C -0.559 4.559 5 C -0.497 4.497 6 C -0.160 4.160 7 C -0.004 4.004 8 N -0.375 5.375 9 C 0.360 3.640 10 O -0.405 6.405 11 C -0.180 4.180 12 C 0.037 3.963 13 N -0.026 5.026 14 C -0.197 4.197 15 C -0.162 4.162 16 O -0.344 6.344 17 Si 0.790 3.210 18 H -0.170 1.170 19 H -0.166 1.166 20 H -0.167 1.167 21 C -0.108 4.108 22 N -0.179 5.179 23 C -0.002 4.002 24 C -0.146 4.146 25 Br 0.094 6.906 26 C -0.068 4.068 27 H 0.087 0.913 28 H 0.087 0.913 29 H 0.087 0.913 30 H 0.087 0.913 31 H 0.087 0.913 32 H 0.087 0.913 33 H 0.087 0.913 34 H 0.087 0.913 35 H 0.087 0.913 36 H 0.098 0.902 37 H 0.098 0.902 38 H 0.091 0.909 39 H 0.091 0.909 40 H 0.090 0.910 41 H 0.090 0.910 42 H 0.237 0.763 43 H 0.213 0.787 44 H 0.145 0.855 45 H 0.227 0.773 46 H 0.208 0.792 47 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.174 0.813 -1.279 1.525 hybrid contribution 0.351 0.767 -0.168 0.860 sum 0.525 1.580 -1.447 2.206 Atomic orbital electron populations 1.26175 1.20941 1.04349 1.04440 0.79150 0.66895 0.66739 0.66327 1.26151 1.06279 1.19148 1.04441 1.26174 1.06261 1.07991 1.15468 1.26135 1.06232 1.01132 1.16188 1.21444 1.01444 0.95854 0.97300 1.21600 0.99808 0.79720 0.99273 1.45895 1.53762 1.12895 1.24948 1.17490 0.80232 0.83900 0.82401 1.90865 1.37555 1.76579 1.35491 1.19296 1.05765 0.95821 0.97124 1.22202 0.94276 0.80813 0.98963 1.42617 1.33365 1.08797 1.17859 1.22091 1.11745 0.88008 0.97865 1.24873 0.89854 1.07536 0.93906 1.86524 1.38710 1.51095 1.58115 0.85409 0.81078 0.72482 0.81988 1.17023 1.16568 1.16658 1.22525 0.96686 0.98926 0.92689 1.70862 1.23603 1.07597 1.15853 1.20440 0.96786 0.91896 0.91083 1.20445 1.04478 0.94174 0.95464 1.96858 1.64343 1.88895 1.40550 1.21094 0.94266 0.93688 0.97712 0.91286 0.91308 0.91309 0.91272 0.91278 0.91269 0.91307 0.91312 0.91285 0.90183 0.90180 0.90903 0.90914 0.90986 0.90971 0.76346 0.78713 0.85470 0.77290 0.79198 0.82812 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 1.23 8.65 101.05 0.87 2.10 16 2 Si 1.01 -4.11 12.19 -169.99 -2.07 -6.19 16 3 C -0.45 1.00 8.65 101.05 0.87 1.88 16 4 C -0.45 1.24 8.65 101.05 0.87 2.12 16 5 C -0.41 1.47 4.45 37.16 0.17 1.64 16 6 C -0.12 0.45 4.70 -26.73 -0.13 0.33 16 7 C 0.12 -0.19 5.67 -4.04 -0.02 -0.21 16 8 N -0.72 1.22 5.51 -61.34 -0.34 0.88 16 9 C 0.57 0.58 7.76 -12.45 -0.10 0.48 16 10 O -0.53 -2.40 16.27 5.28 0.09 -2.32 16 11 C -0.17 -0.03 5.84 -105.37 -0.61 -0.64 16 12 C 0.16 0.13 9.91 -16.36 -0.16 -0.03 16 13 N -0.35 -0.56 2.93 -58.09 -0.17 -0.73 16 14 C -0.09 -0.05 6.25 -81.43 -0.51 -0.55 16 15 C -0.05 0.09 3.06 36.01 0.11 0.20 16 16 O -0.54 0.60 10.90 -35.23 -0.38 0.22 16 17 Si 0.97 -2.21 26.59 -169.99 -4.52 -6.73 16 18 H -0.25 0.33 7.11 56.52 0.40 0.73 16 19 H -0.24 0.57 6.84 56.52 0.39 0.96 16 20 H -0.24 0.25 7.11 56.52 0.40 0.65 16 21 C 0.04 0.06 10.44 -17.94 -0.19 -0.13 16 22 N -0.46 -1.80 11.30 -12.70 -0.14 -1.94 16 23 C 0.24 0.72 7.59 -155.91 -1.18 -0.46 16 24 C -0.06 -0.09 6.24 -39.35 -0.25 -0.33 16 25 Br 0.01 0.01 33.72 -68.01 -2.29 -2.28 16 26 C -0.04 0.04 9.26 -39.15 -0.36 -0.33 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 29 H 0.07 -0.20 7.79 -51.93 -0.40 -0.61 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 32 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 33 H 0.07 -0.21 7.79 -51.93 -0.40 -0.61 16 34 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 35 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 36 H 0.08 -0.27 7.96 -51.93 -0.41 -0.68 16 37 H 0.08 -0.27 7.96 -51.93 -0.41 -0.69 16 38 H 0.07 -0.33 7.79 -51.93 -0.40 -0.73 16 39 H 0.07 -0.32 7.79 -51.93 -0.40 -0.73 16 40 H 0.07 -0.04 8.14 -51.93 -0.42 -0.46 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 42 H 0.40 -1.75 6.51 -40.82 -0.27 -2.02 16 43 H 0.20 0.11 6.19 -52.49 -0.32 -0.21 16 44 H 0.13 -0.34 7.96 -51.93 -0.41 -0.75 16 45 H 0.38 -1.43 8.70 45.56 0.40 -1.03 16 46 H 0.19 -0.27 6.71 -52.49 -0.35 -0.62 16 47 H 0.15 -0.62 6.44 -52.48 -0.34 -0.96 16 LS Contribution 409.22 15.07 6.17 6.17 Total: 0.00 -8.48 409.22 -10.57 -19.06 By element: Atomic # 1 Polarization: -5.89 SS G_CDS: -6.29 Total: -12.18 kcal Atomic # 6 Polarization: 6.66 SS G_CDS: -0.61 Total: 6.05 kcal Atomic # 7 Polarization: -1.14 SS G_CDS: -0.65 Total: -1.79 kcal Atomic # 8 Polarization: -1.80 SS G_CDS: -0.30 Total: -2.10 kcal Atomic # 14 Polarization: -6.32 SS G_CDS: -6.59 Total: -12.92 kcal Atomic # 35 Polarization: 0.01 SS G_CDS: -2.29 Total: -2.28 kcal Total LS contribution 6.17 Total: 6.17 kcal Total: -8.48 -10.57 -19.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9704008_12335884.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -7.465 kcal (2) G-P(sol) polarization free energy of solvation -8.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -15.948 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.057 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.522 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds