Wall clock time and date at job start Tue Mar 9 2021 12:54:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 N 1.28470 * 124.88713 * 2 1 4 4 C 1.31804 * 110.07491 * 180.02562 * 3 2 1 5 5 C 1.47709 * 126.51663 * 180.02562 * 4 3 2 6 6 O 1.21571 * 120.00053 * 179.97438 * 5 4 3 7 7 N 1.34772 * 120.00365 * 359.97408 * 5 4 3 8 8 C 1.46504 * 120.00448 * 180.02562 * 7 5 4 9 9 C 1.52996 * 109.47307 * 180.02562 * 8 7 5 10 10 C 1.53000 * 109.47344 * 180.02562 * 9 8 7 11 11 Si 1.86295 * 109.47245 * 180.02562 * 10 9 8 12 12 C 1.86298 * 109.47569 * 59.99991 * 11 10 9 13 13 C 1.86302 * 109.46900 * 179.97438 * 11 10 9 14 14 C 1.86304 * 109.46849 * 299.99615 * 11 10 9 15 15 C 1.41501 * 106.96289 * 359.76989 * 4 3 2 16 16 C 1.35031 * 124.88218 * 180.02562 * 2 1 3 17 17 C 1.50697 * 126.38808 * 359.94776 * 16 2 1 18 18 O 1.42906 * 109.46831 * 30.00837 * 17 16 2 19 19 Si 1.86300 * 109.47007 * 150.00226 * 17 16 2 20 20 H 1.48503 * 109.46942 * 60.00611 * 19 17 16 21 21 H 1.48503 * 109.47276 * 180.02562 * 19 17 16 22 22 H 1.48494 * 109.47372 * 300.00074 * 19 17 16 23 23 H 1.09003 * 109.47366 * 269.97360 * 1 2 3 24 24 H 1.09000 * 109.47273 * 29.97141 * 1 2 3 25 25 H 1.09003 * 109.47344 * 149.97349 * 1 2 3 26 26 H 0.97003 * 119.99922 * 0.02562 * 7 5 4 27 27 H 1.08995 * 109.46620 * 299.99916 * 8 7 5 28 28 H 1.09005 * 109.46617 * 60.00030 * 8 7 5 29 29 H 1.09005 * 109.47434 * 300.00068 * 9 8 7 30 30 H 1.09003 * 109.47282 * 59.99874 * 9 8 7 31 31 H 1.09005 * 109.46789 * 300.00315 * 10 9 8 32 32 H 1.09003 * 109.47154 * 59.99648 * 10 9 8 33 33 H 1.08996 * 109.46998 * 59.99314 * 12 11 10 34 34 H 1.08990 * 109.47267 * 180.02562 * 12 11 10 35 35 H 1.09008 * 109.46867 * 300.00296 * 12 11 10 36 36 H 1.08994 * 109.47363 * 59.99884 * 13 11 10 37 37 H 1.09004 * 109.47023 * 179.97438 * 13 11 10 38 38 H 1.09000 * 109.47381 * 299.99449 * 13 11 10 39 39 H 1.08996 * 109.46879 * 60.00842 * 14 11 10 40 40 H 1.09004 * 109.46600 * 180.02562 * 14 11 10 41 41 H 1.08994 * 109.47329 * 300.00064 * 14 11 10 42 42 H 1.08002 * 127.24849 * 180.24674 * 15 4 3 43 43 H 1.09000 * 109.47374 * 270.00410 * 17 16 2 44 44 H 0.96693 * 114.00047 * 60.00191 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7169 -0.0006 5 6 4.6272 1.6398 -0.0002 6 8 5.7597 1.1976 -0.0003 7 7 4.4241 2.9721 0.0002 8 6 5.5679 3.8876 0.0000 9 6 5.0648 5.3325 0.0012 10 6 6.2593 6.2885 0.0004 11 14 5.6467 8.0478 0.0027 12 6 4.6152 8.3444 1.5254 13 6 7.1013 9.2119 0.0024 14 6 4.6111 8.3467 -1.5169 15 6 3.5271 -0.6971 0.0045 16 6 2.2372 -1.1077 -0.0005 17 6 1.7533 -2.5349 0.0000 18 8 0.4949 -2.6113 -0.6729 19 14 2.9939 -3.6115 -0.8790 20 1 4.3016 -3.5320 -0.1798 21 1 2.5168 -5.0178 -0.8792 22 1 3.1519 -3.1428 -2.2792 23 1 -0.3634 -0.0005 1.0277 24 1 -0.3634 0.8902 -0.5134 25 1 -0.3634 -0.8898 -0.5143 26 1 3.5206 3.3250 0.0007 27 1 6.1730 3.7132 0.8897 28 1 6.1723 3.7136 -0.8903 29 1 4.4594 5.5072 -0.8882 30 1 4.4607 5.5061 0.8918 31 1 6.8651 6.1139 0.8896 32 1 6.8631 6.1147 -0.8904 33 1 5.2211 8.1694 2.4144 34 1 4.2564 9.3735 1.5265 35 1 3.7641 7.6632 1.5261 36 1 7.7052 9.0386 -0.8883 37 1 6.7428 10.2413 0.0033 38 1 7.7068 9.0370 0.8916 39 1 3.7600 7.6657 -1.5162 40 1 4.2530 9.3762 -1.5158 41 1 5.2146 8.1733 -2.4078 42 1 4.4108 -1.3181 0.0092 43 1 1.6373 -2.8789 1.0277 44 1 0.5234 -2.3200 -1.5945 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV m_22_9704008_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:09 Heat of formation + Delta-G solvation = -44.490427 kcal Electronic energy + Delta-G solvation = -21882.131958 eV Core-core repulsion = 18573.404015 eV Total energy + Delta-G solvation = -3308.727943 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 299.158 amu Computer time = 0.43 seconds Orbital eigenvalues (eV) -43.78189 -40.26132 -38.28614 -36.66222 -34.43113 -33.50638 -32.49512 -29.58764 -28.79620 -28.43577 -28.43315 -27.22537 -26.35449 -23.82840 -22.46451 -22.13819 -20.72787 -19.15564 -17.59477 -17.42725 -17.28633 -16.83103 -16.65019 -16.09269 -15.89398 -15.33505 -15.26143 -14.99783 -14.41856 -14.24630 -14.16804 -14.09502 -13.93779 -13.78472 -13.59827 -13.40503 -13.39278 -13.12305 -13.10921 -13.09824 -12.65662 -12.57235 -12.42447 -12.11550 -11.81916 -11.76153 -11.10934 -10.95858 -10.82543 -10.80443 -10.52277 -10.17902 -9.93450 -9.89009 0.56946 0.79168 1.10424 1.40828 1.42404 1.57262 1.76912 1.86134 1.87527 1.87758 2.29751 2.53817 2.63305 2.94235 3.31166 3.39515 3.96940 4.05523 4.11080 4.14368 4.25792 4.27753 4.34937 4.48396 4.55512 4.67494 4.68199 4.71114 4.71725 4.73979 4.75035 4.75700 4.76077 4.80658 5.02679 5.17428 5.33540 5.34643 5.46736 5.53804 5.54405 5.55629 5.66419 6.10555 6.54259 6.91358 7.33389 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.070 3.930 2 N -0.262 5.262 3 N -0.257 5.257 4 C -0.015 4.015 5 C 0.604 3.396 6 O -0.531 6.531 7 N -0.720 5.720 8 C 0.119 3.881 9 C -0.121 4.121 10 C -0.411 4.411 11 Si 1.012 2.988 12 C -0.451 4.451 13 C -0.452 4.452 14 C -0.451 4.451 15 C -0.180 4.180 16 C -0.020 4.020 17 C -0.056 4.056 18 O -0.538 6.538 19 Si 0.971 3.029 20 H -0.243 1.243 21 H -0.247 1.247 22 H -0.248 1.248 23 H 0.085 0.915 24 H 0.093 0.907 25 H 0.121 0.879 26 H 0.407 0.593 27 H 0.069 0.931 28 H 0.069 0.931 29 H 0.071 0.929 30 H 0.071 0.929 31 H 0.079 0.921 32 H 0.079 0.921 33 H 0.068 0.932 34 H 0.067 0.933 35 H 0.068 0.932 36 H 0.068 0.932 37 H 0.068 0.932 38 H 0.068 0.932 39 H 0.068 0.932 40 H 0.067 0.933 41 H 0.068 0.932 42 H 0.167 0.833 43 H 0.130 0.870 44 H 0.380 0.620 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.247 0.560 -0.770 4.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.051 5.051 3 N -0.094 5.094 4 C -0.175 4.175 5 C 0.389 3.611 6 O -0.405 6.405 7 N -0.372 5.372 8 C -0.004 4.004 9 C -0.159 4.159 10 C -0.497 4.497 11 Si 1.208 2.792 12 C -0.559 4.559 13 C -0.559 4.559 14 C -0.559 4.559 15 C -0.208 4.208 16 C -0.145 4.145 17 C -0.166 4.166 18 O -0.344 6.344 19 Si 0.790 3.210 20 H -0.166 1.166 21 H -0.170 1.170 22 H -0.171 1.171 23 H 0.103 0.897 24 H 0.112 0.888 25 H 0.138 0.862 26 H 0.242 0.758 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.090 0.910 30 H 0.090 0.910 31 H 0.098 0.902 32 H 0.098 0.902 33 H 0.087 0.913 34 H 0.086 0.914 35 H 0.087 0.913 36 H 0.087 0.913 37 H 0.087 0.913 38 H 0.087 0.913 39 H 0.087 0.913 40 H 0.086 0.914 41 H 0.087 0.913 42 H 0.184 0.816 43 H 0.147 0.853 44 H 0.228 0.772 Dipole moment (debyes) X Y Z Total from point charges -3.846 0.423 -0.616 3.918 hybrid contribution -0.174 0.162 -0.115 0.264 sum -4.020 0.585 -0.731 4.128 Atomic orbital electron populations 1.22651 0.72408 1.06670 1.05263 1.45363 1.07998 1.02035 1.49708 1.73507 1.02884 1.14068 1.18963 1.21793 0.90780 0.93863 1.11022 1.16862 0.86559 0.81476 0.76245 1.90818 1.22564 1.77143 1.49983 1.45896 1.10875 1.05442 1.74996 1.21553 0.88193 0.87986 1.02719 1.21421 0.98539 0.93055 1.02861 1.26143 1.02031 1.16233 1.05264 0.79163 0.66894 0.66125 0.67013 1.26170 1.09435 1.04763 1.15498 1.26144 1.14523 1.10842 1.04432 1.26168 1.09476 1.04766 1.15442 1.21557 0.96463 0.94056 1.08731 1.21908 0.91266 0.91597 1.09748 1.24813 0.94101 0.93423 1.04277 1.86480 1.30009 1.88665 1.29209 0.85384 0.77113 0.78433 0.80064 1.16578 1.17003 1.17121 0.89691 0.88836 0.86150 0.75845 0.91226 0.91218 0.91033 0.91027 0.90236 0.90233 0.91289 0.91358 0.91306 0.91279 0.91311 0.91271 0.91300 0.91360 0.91294 0.81602 0.85277 0.77170 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.20 11.00 59.85 0.66 0.46 16 2 N -0.26 -0.19 3.70 -63.85 -0.24 -0.42 16 3 N -0.26 -0.67 11.67 33.42 0.39 -0.28 16 4 C -0.02 -0.06 7.13 -82.77 -0.59 -0.65 16 5 C 0.60 2.88 7.82 -12.39 -0.10 2.79 16 6 O -0.53 -4.19 16.93 5.30 0.09 -4.10 16 7 N -0.72 -1.35 5.55 -61.29 -0.34 -1.69 16 8 C 0.12 0.11 5.67 -4.04 -0.02 0.09 16 9 C -0.12 0.20 4.70 -26.73 -0.13 0.07 16 10 C -0.41 0.87 4.45 37.16 0.17 1.04 16 11 Si 1.01 -3.02 12.19 -169.99 -2.07 -5.09 16 12 C -0.45 0.77 8.65 101.05 0.87 1.64 16 13 C -0.45 0.65 8.65 101.05 0.87 1.52 16 14 C -0.45 0.79 8.65 101.05 0.87 1.66 16 15 C -0.18 -0.48 9.35 -39.36 -0.37 -0.84 16 16 C -0.02 -0.01 6.17 -82.21 -0.51 -0.52 16 17 C -0.06 0.11 2.99 36.00 0.11 0.22 16 18 O -0.54 1.52 10.02 -35.23 -0.35 1.17 16 19 Si 0.97 -1.53 26.64 -169.99 -4.53 -6.06 16 20 H -0.24 0.13 6.87 56.52 0.39 0.52 16 21 H -0.25 0.18 7.11 56.52 0.40 0.58 16 22 H -0.25 0.15 7.11 56.52 0.40 0.55 16 23 H 0.08 -0.28 8.14 -51.93 -0.42 -0.70 16 24 H 0.09 -0.35 8.14 -51.93 -0.42 -0.77 16 25 H 0.12 -0.52 5.00 -51.93 -0.26 -0.78 16 26 H 0.41 0.05 8.20 -40.82 -0.33 -0.29 16 27 H 0.07 0.12 8.14 -51.93 -0.42 -0.30 16 28 H 0.07 0.12 8.14 -51.93 -0.42 -0.31 16 29 H 0.07 -0.17 7.79 -51.93 -0.40 -0.57 16 30 H 0.07 -0.16 7.79 -51.93 -0.40 -0.57 16 31 H 0.08 -0.16 7.96 -51.93 -0.41 -0.57 16 32 H 0.08 -0.16 7.96 -51.93 -0.41 -0.57 16 33 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 34 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 35 H 0.07 -0.12 7.79 -51.92 -0.40 -0.53 16 36 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 37 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 38 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 39 H 0.07 -0.12 7.79 -51.93 -0.40 -0.53 16 40 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 41 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 42 H 0.17 0.32 6.87 -52.49 -0.36 -0.04 16 43 H 0.13 -0.39 7.96 -51.93 -0.41 -0.80 16 44 H 0.38 -2.16 8.39 45.56 0.38 -1.78 16 LS Contribution 364.86 15.07 5.50 5.50 Total: 0.00 -7.98 364.86 -6.54 -14.51 By element: Atomic # 1 Polarization: -4.18 SS G_CDS: -6.83 Total: -11.01 kcal Atomic # 6 Polarization: 5.63 SS G_CDS: 1.84 Total: 7.48 kcal Atomic # 7 Polarization: -2.21 SS G_CDS: -0.19 Total: -2.39 kcal Atomic # 8 Polarization: -2.67 SS G_CDS: -0.26 Total: -2.93 kcal Atomic # 14 Polarization: -4.55 SS G_CDS: -6.60 Total: -11.15 kcal Total LS contribution 5.50 Total: 5.50 kcal Total: -7.98 -6.54 -14.51 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9704008_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -29.979 kcal (2) G-P(sol) polarization free energy of solvation -7.975 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -37.954 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.537 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.512 kcal (6) G-S(sol) free energy of system = (1) + (5) -44.490 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.43 seconds