Wall clock time and date at job start Tue Mar 9 2021 12:54:09 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 N 1.28470 * 124.88713 * 2 1 4 4 C 1.31804 * 110.07491 * 180.02562 * 3 2 1 5 5 C 1.47709 * 126.51663 * 180.02562 * 4 3 2 6 6 O 1.21571 * 120.00053 * 179.97438 * 5 4 3 7 7 N 1.34772 * 120.00365 * 359.97408 * 5 4 3 8 8 C 1.46504 * 120.00448 * 180.02562 * 7 5 4 9 9 C 1.52996 * 109.47307 * 180.02562 * 8 7 5 10 10 C 1.53000 * 109.47344 * 180.02562 * 9 8 7 11 11 Si 1.86295 * 109.47245 * 180.02562 * 10 9 8 12 12 C 1.86298 * 109.47569 * 59.99991 * 11 10 9 13 13 C 1.86302 * 109.46900 * 179.97438 * 11 10 9 14 14 C 1.86304 * 109.46849 * 299.99615 * 11 10 9 15 15 C 1.41501 * 106.96289 * 359.76989 * 4 3 2 16 16 C 1.35031 * 124.88218 * 180.02562 * 2 1 3 17 17 C 1.50697 * 126.38808 * 359.94776 * 16 2 1 18 18 O 1.42906 * 109.46831 * 30.00837 * 17 16 2 19 19 Si 1.86300 * 109.47007 * 150.00226 * 17 16 2 20 20 H 1.48503 * 109.46942 * 60.00611 * 19 17 16 21 21 H 1.48503 * 109.47276 * 180.02562 * 19 17 16 22 22 H 1.48494 * 109.47372 * 300.00074 * 19 17 16 23 23 H 1.09003 * 109.47366 * 269.97360 * 1 2 3 24 24 H 1.09000 * 109.47273 * 29.97141 * 1 2 3 25 25 H 1.09003 * 109.47344 * 149.97349 * 1 2 3 26 26 H 0.97003 * 119.99922 * 0.02562 * 7 5 4 27 27 H 1.08995 * 109.46620 * 299.99916 * 8 7 5 28 28 H 1.09005 * 109.46617 * 60.00030 * 8 7 5 29 29 H 1.09005 * 109.47434 * 300.00068 * 9 8 7 30 30 H 1.09003 * 109.47282 * 59.99874 * 9 8 7 31 31 H 1.09005 * 109.46789 * 300.00315 * 10 9 8 32 32 H 1.09003 * 109.47154 * 59.99648 * 10 9 8 33 33 H 1.08996 * 109.46998 * 59.99314 * 12 11 10 34 34 H 1.08990 * 109.47267 * 180.02562 * 12 11 10 35 35 H 1.09008 * 109.46867 * 300.00296 * 12 11 10 36 36 H 1.08994 * 109.47363 * 59.99884 * 13 11 10 37 37 H 1.09004 * 109.47023 * 179.97438 * 13 11 10 38 38 H 1.09000 * 109.47381 * 299.99449 * 13 11 10 39 39 H 1.08996 * 109.46879 * 60.00842 * 14 11 10 40 40 H 1.09004 * 109.46600 * 180.02562 * 14 11 10 41 41 H 1.08994 * 109.47329 * 300.00064 * 14 11 10 42 42 H 1.08002 * 127.24849 * 180.24674 * 15 4 3 43 43 H 1.09000 * 109.47374 * 270.00410 * 17 16 2 44 44 H 0.96693 * 114.00047 * 60.00191 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0538 0.0000 4 6 3.4740 0.7169 -0.0006 5 6 4.6272 1.6398 -0.0002 6 8 5.7597 1.1976 -0.0003 7 7 4.4241 2.9721 0.0002 8 6 5.5679 3.8876 0.0000 9 6 5.0648 5.3325 0.0012 10 6 6.2593 6.2885 0.0004 11 14 5.6467 8.0478 0.0027 12 6 4.6152 8.3444 1.5254 13 6 7.1013 9.2119 0.0024 14 6 4.6111 8.3467 -1.5169 15 6 3.5271 -0.6971 0.0045 16 6 2.2372 -1.1077 -0.0005 17 6 1.7533 -2.5349 0.0000 18 8 0.4949 -2.6113 -0.6729 19 14 2.9939 -3.6115 -0.8790 20 1 4.3016 -3.5320 -0.1798 21 1 2.5168 -5.0178 -0.8792 22 1 3.1519 -3.1428 -2.2792 23 1 -0.3634 -0.0005 1.0277 24 1 -0.3634 0.8902 -0.5134 25 1 -0.3634 -0.8898 -0.5143 26 1 3.5206 3.3250 0.0007 27 1 6.1730 3.7132 0.8897 28 1 6.1723 3.7136 -0.8903 29 1 4.4594 5.5072 -0.8882 30 1 4.4607 5.5061 0.8918 31 1 6.8651 6.1139 0.8896 32 1 6.8631 6.1147 -0.8904 33 1 5.2211 8.1694 2.4144 34 1 4.2564 9.3735 1.5265 35 1 3.7641 7.6632 1.5261 36 1 7.7052 9.0386 -0.8883 37 1 6.7428 10.2413 0.0033 38 1 7.7068 9.0370 0.8916 39 1 3.7600 7.6657 -1.5162 40 1 4.2530 9.3762 -1.5158 41 1 5.2146 8.1733 -2.4078 42 1 4.4108 -1.3181 0.0092 43 1 1.6373 -2.8789 1.0277 44 1 0.5234 -2.3200 -1.5945 RHF calculation, no. of doubly occupied orbitals= 54 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9704008_13259642.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:09 Heat of formation + Delta-G solvation = -42.272596 kcal Electronic energy + Delta-G solvation = -21882.035786 eV Core-core repulsion = 18573.404015 eV Total energy + Delta-G solvation = -3308.631771 eV No. of doubly occupied orbitals = 54 Molecular weight (most abundant/longest-lived isotopes) = 299.158 amu Computer time = 0.55 seconds Orbital eigenvalues (eV) -43.87467 -40.56437 -38.11451 -36.81977 -34.48147 -33.55052 -32.52663 -29.46093 -28.77882 -28.29083 -28.26809 -27.20454 -26.31402 -23.92980 -22.48530 -22.21746 -20.84204 -19.14548 -17.63169 -17.55967 -17.26485 -16.95305 -16.70996 -15.95376 -15.90209 -15.42296 -15.24590 -15.12520 -14.38385 -14.18700 -14.05367 -14.00371 -13.78545 -13.64976 -13.44416 -13.38834 -13.29543 -13.02539 -13.01941 -12.95990 -12.57283 -12.50375 -12.42694 -12.06510 -11.80965 -11.71532 -11.44621 -10.86269 -10.68682 -10.64482 -10.41240 -10.37273 -10.03838 -9.98373 0.39781 0.74170 1.12307 1.48864 1.49962 1.63659 1.92711 1.96846 2.04199 2.08101 2.19342 2.24900 2.77760 3.12020 3.32158 3.35654 3.98060 4.11492 4.17339 4.31279 4.36852 4.39099 4.46756 4.52249 4.58069 4.70011 4.76735 4.80066 4.84039 4.84220 4.88465 4.89709 4.90335 4.90631 5.06133 5.17843 5.26823 5.31645 5.52591 5.62729 5.66797 5.69323 5.70527 6.34591 6.45949 6.79057 7.07308 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.062 3.938 2 N -0.258 5.258 3 N -0.262 5.262 4 C -0.040 4.040 5 C 0.598 3.402 6 O -0.574 6.574 7 N -0.707 5.707 8 C 0.116 3.884 9 C -0.118 4.118 10 C -0.422 4.422 11 Si 1.089 2.911 12 C -0.467 4.467 13 C -0.472 4.472 14 C -0.466 4.466 15 C -0.204 4.204 16 C -0.009 4.009 17 C -0.042 4.042 18 O -0.538 6.538 19 Si 1.001 2.999 20 H -0.263 1.263 21 H -0.254 1.254 22 H -0.263 1.263 23 H 0.093 0.907 24 H 0.104 0.896 25 H 0.138 0.862 26 H 0.416 0.584 27 H 0.059 0.941 28 H 0.059 0.941 29 H 0.083 0.917 30 H 0.082 0.918 31 H 0.078 0.922 32 H 0.079 0.921 33 H 0.066 0.934 34 H 0.065 0.935 35 H 0.071 0.929 36 H 0.066 0.934 37 H 0.065 0.935 38 H 0.066 0.934 39 H 0.071 0.929 40 H 0.065 0.935 41 H 0.066 0.934 42 H 0.163 0.837 43 H 0.146 0.854 44 H 0.394 0.606 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.059 0.588 -0.745 6.133 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 N -0.047 5.047 3 N -0.100 5.100 4 C -0.198 4.198 5 C 0.384 3.616 6 O -0.452 6.452 7 N -0.359 5.359 8 C -0.007 4.007 9 C -0.156 4.156 10 C -0.506 4.506 11 Si 1.280 2.720 12 C -0.573 4.573 13 C -0.577 4.577 14 C -0.573 4.573 15 C -0.232 4.232 16 C -0.135 4.135 17 C -0.154 4.154 18 O -0.346 6.346 19 Si 0.823 3.177 20 H -0.187 1.187 21 H -0.178 1.178 22 H -0.187 1.187 23 H 0.112 0.888 24 H 0.122 0.878 25 H 0.156 0.844 26 H 0.253 0.747 27 H 0.077 0.923 28 H 0.078 0.922 29 H 0.101 0.899 30 H 0.101 0.899 31 H 0.097 0.903 32 H 0.098 0.902 33 H 0.085 0.915 34 H 0.084 0.916 35 H 0.090 0.910 36 H 0.085 0.915 37 H 0.085 0.915 38 H 0.085 0.915 39 H 0.090 0.910 40 H 0.084 0.916 41 H 0.085 0.915 42 H 0.180 0.820 43 H 0.163 0.837 44 H 0.244 0.756 Dipole moment (debyes) X Y Z Total from point charges -5.693 0.486 -0.602 5.745 hybrid contribution 0.346 0.150 -0.147 0.405 sum -5.346 0.636 -0.750 5.436 Atomic orbital electron populations 1.22987 0.70236 1.08113 1.06285 1.45762 1.09145 1.01591 1.48232 1.73457 1.02444 1.14877 1.19206 1.21755 0.91048 0.94254 1.12735 1.17130 0.86368 0.82368 0.75780 1.90779 1.24126 1.77953 1.52300 1.45884 1.11710 1.04744 1.73541 1.21652 0.87942 0.89382 1.01727 1.21455 0.98986 0.91123 1.03989 1.26320 1.02008 1.17007 1.05298 0.77978 0.64769 0.64066 0.65201 1.26359 1.09924 1.04731 1.16280 1.26391 1.15627 1.11449 1.04250 1.26352 1.09967 1.04740 1.16195 1.21702 0.97557 0.93867 1.10106 1.22201 0.90547 0.92667 1.08045 1.24733 0.94158 0.91282 1.05195 1.86463 1.29163 1.88553 1.30392 0.84949 0.76157 0.77808 0.78817 1.18738 1.17781 1.18716 0.88810 0.87772 0.84433 0.74718 0.92287 0.92225 0.89859 0.89911 0.90283 0.90245 0.91514 0.91604 0.90994 0.91467 0.91548 0.91479 0.90968 0.91605 0.91487 0.81956 0.83674 0.75588 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.46 11.00 127.77 1.41 0.95 16 2 N -0.26 -0.18 3.70 -355.93 -1.32 -1.49 16 3 N -0.26 -1.40 11.67 -48.18 -0.56 -1.96 16 4 C -0.04 -0.36 7.13 42.46 0.30 -0.06 16 5 C 0.60 6.88 7.82 86.75 0.68 7.56 16 6 O -0.57 -10.66 16.93 -3.94 -0.07 -10.73 16 7 N -0.71 -3.45 5.55 -466.11 -2.59 -6.03 16 8 C 0.12 0.35 5.67 86.38 0.49 0.84 16 9 C -0.12 0.40 4.70 30.59 0.14 0.54 16 10 C -0.42 1.82 4.45 71.98 0.32 2.14 16 11 Si 1.09 -6.93 12.19 68.60 0.84 -6.09 16 12 C -0.47 1.81 8.65 113.37 0.98 2.79 16 13 C -0.47 1.29 8.65 113.37 0.98 2.28 16 14 C -0.47 1.86 8.65 113.37 0.98 2.84 16 15 C -0.20 -1.33 9.35 22.41 0.21 -1.12 16 16 C -0.01 -0.01 6.17 41.40 0.26 0.25 16 17 C -0.04 0.22 2.99 71.23 0.21 0.43 16 18 O -0.54 4.10 10.02 -148.98 -1.49 2.61 16 19 Si 1.00 -2.93 26.64 68.60 1.83 -1.11 16 20 H -0.26 -0.09 6.87 99.48 0.68 0.59 16 21 H -0.25 0.42 7.11 99.48 0.71 1.13 16 22 H -0.26 0.15 7.11 99.48 0.71 0.86 16 23 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 24 H 0.10 -0.96 8.14 -2.39 -0.02 -0.98 16 25 H 0.14 -1.51 5.00 -2.39 -0.01 -1.52 16 26 H 0.42 0.26 8.20 -92.71 -0.76 -0.50 16 27 H 0.06 0.31 8.14 -2.39 -0.02 0.29 16 28 H 0.06 0.30 8.14 -2.38 -0.02 0.28 16 29 H 0.08 -0.45 7.79 -2.38 -0.02 -0.47 16 30 H 0.08 -0.44 7.79 -2.39 -0.02 -0.46 16 31 H 0.08 -0.31 7.96 -2.38 -0.02 -0.33 16 32 H 0.08 -0.32 7.96 -2.39 -0.02 -0.33 16 33 H 0.07 -0.21 7.96 -2.39 -0.02 -0.23 16 34 H 0.06 -0.21 7.96 -2.39 -0.02 -0.23 16 35 H 0.07 -0.31 7.79 -2.38 -0.02 -0.33 16 36 H 0.07 -0.16 7.96 -2.39 -0.02 -0.18 16 37 H 0.07 -0.15 7.96 -2.38 -0.02 -0.17 16 38 H 0.07 -0.15 7.96 -2.39 -0.02 -0.17 16 39 H 0.07 -0.32 7.79 -2.39 -0.02 -0.34 16 40 H 0.06 -0.21 7.96 -2.38 -0.02 -0.23 16 41 H 0.07 -0.22 7.96 -2.39 -0.02 -0.24 16 42 H 0.16 1.01 6.87 -2.91 -0.02 0.99 16 43 H 0.15 -1.13 7.96 -2.39 -0.02 -1.14 16 44 H 0.39 -5.24 8.39 -74.06 -0.62 -5.87 16 Total: 0.00 -19.71 364.86 3.94 -15.77 By element: Atomic # 1 Polarization: -10.75 SS G_CDS: 0.34 Total: -10.41 kcal Atomic # 6 Polarization: 12.48 SS G_CDS: 6.96 Total: 19.44 kcal Atomic # 7 Polarization: -5.02 SS G_CDS: -4.47 Total: -9.49 kcal Atomic # 8 Polarization: -6.56 SS G_CDS: -1.56 Total: -8.12 kcal Atomic # 14 Polarization: -9.86 SS G_CDS: 2.66 Total: -7.20 kcal Total: -19.71 3.94 -15.77 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9704008_13259642.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.504 kcal (2) G-P(sol) polarization free energy of solvation -19.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.215 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.942 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.769 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.273 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.55 seconds