Wall clock time and date at job start Tue Mar 9 2021 12:54:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= -1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52994 * 1 3 3 N 1.46498 * 109.47090 * 2 1 4 4 C 1.34777 * 120.00155 * 180.02562 * 3 2 1 5 5 O 1.21856 * 119.99941 * 0.02562 * 4 3 2 6 6 C 1.40187 * 119.99904 * 179.97438 * 4 3 2 7 7 S 1.55359 * 120.00004 * 180.02562 * 6 4 3 8 8 O 1.52198 * 102.99853 * 286.87568 * 7 6 4 9 9 C 1.76203 * 103.00080 * 180.02562 * 7 6 4 10 10 C 1.38266 * 119.96214 * 29.97864 * 9 7 6 11 11 C 1.38310 * 120.14188 * 180.02562 * 10 9 7 12 12 C 1.38088 * 120.07244 * 359.68458 * 11 10 9 13 13 C 1.38906 * 119.92567 * 0.58934 * 12 11 10 14 14 N 1.39851 * 120.07288 * 179.70053 * 13 12 11 15 15 C 1.34776 * 120.00281 * 146.40593 * 14 13 12 16 16 O 1.21602 * 119.99874 * 354.72048 * 15 14 13 17 17 C 1.47548 * 120.00241 * 174.71638 * 15 14 13 18 18 C 1.36511 * 120.01080 * 180.02562 * 17 15 14 19 19 N 1.35953 * 120.50081 * 180.02562 * 18 17 15 20 20 C 1.37003 * 132.40981 * 179.97438 * 19 18 17 21 21 C 1.50699 * 126.42880 * 0.02562 * 20 19 18 22 22 O 1.42907 * 109.46757 * 329.70536 * 21 20 19 23 23 Si 1.86300 * 109.47208 * 209.71328 * 21 20 19 24 24 H 1.48498 * 109.47283 * 59.99245 * 23 21 20 25 25 H 1.48507 * 109.46833 * 299.99762 * 23 21 20 26 26 H 1.48492 * 109.47256 * 179.97438 * 23 21 20 27 27 C 1.35002 * 107.13901 * 179.75564 * 20 19 18 28 28 N 1.33582 * 108.66210 * 0.24495 * 27 20 19 29 29 C 1.32423 * 109.21914 * 359.97438 * 28 27 20 30 30 C 1.41248 * 132.11399 * 180.02562 * 29 28 27 31 31 Br 1.89095 * 120.25432 * 359.93726 * 30 29 28 32 32 C 1.35710 * 119.49034 * 179.32463 * 30 29 28 33 33 C 1.38126 * 119.96455 * 209.99898 * 9 7 6 34 34 H 1.08998 * 109.47386 * 299.99876 * 1 2 3 35 35 H 1.09002 * 109.47475 * 60.00313 * 1 2 3 36 36 H 1.09010 * 109.47085 * 179.97438 * 1 2 3 37 37 H 1.09005 * 109.47041 * 240.00258 * 2 1 3 38 38 H 1.08994 * 109.47402 * 120.00052 * 2 1 3 39 39 H 0.97001 * 119.99921 * 0.02562 * 3 2 1 40 40 H 1.08000 * 120.00406 * 0.02562 * 6 4 3 41 41 H 1.08000 * 119.92756 * 0.02562 * 10 9 7 42 42 H 1.08001 * 119.96030 * 179.97438 * 11 10 9 43 43 H 1.08001 * 120.03261 * 180.29526 * 12 11 10 44 44 H 0.97005 * 119.99993 * 326.41231 * 14 13 12 45 45 H 1.08000 * 119.74913 * 0.03724 * 18 17 15 46 46 H 1.08997 * 109.47331 * 89.70567 * 21 20 19 47 47 H 0.96694 * 114.00299 * 300.00388 * 22 21 20 48 48 H 1.08003 * 125.66661 * 180.24068 * 27 20 19 49 49 H 1.07999 * 120.23553 * 180.19806 * 32 30 29 50 50 H 1.08001 * 120.03660 * 359.97438 * 33 9 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5299 0.0000 0.0000 3 7 2.0183 1.3812 0.0000 4 6 3.3433 1.6275 -0.0005 5 8 4.1352 0.7013 -0.0015 6 6 3.8105 2.9492 -0.0011 7 16 5.3380 3.2332 -0.0023 8 8 5.7543 2.8727 1.4166 9 6 5.4139 4.9936 -0.0018 10 6 4.4075 5.7280 0.5978 11 6 4.4630 7.1100 0.5999 12 6 5.5278 7.7606 0.0084 13 6 6.5376 7.0258 -0.5998 14 7 7.6142 7.6817 -1.2053 15 6 8.8405 7.1228 -1.1870 16 8 9.0318 6.0969 -0.5628 17 6 9.9508 7.7556 -1.9243 18 6 11.1928 7.1894 -1.9063 19 7 12.2231 7.7643 -2.5817 20 6 13.5400 7.4163 -2.7289 21 6 14.2201 6.2129 -2.1285 22 8 13.5906 5.8787 -0.8899 23 14 16.0171 6.6013 -1.8268 24 1 16.1251 7.7493 -0.8910 25 1 16.6712 6.9488 -3.1140 26 1 16.6871 5.4158 -1.2347 27 6 14.1126 8.3505 -3.5176 28 7 13.1877 9.2556 -3.8487 29 6 12.0335 8.9236 -3.2908 30 6 10.7579 9.5293 -3.3211 31 35 10.4834 11.1241 -4.2992 32 6 9.7278 8.9511 -2.6530 33 6 6.4785 5.6384 -0.6008 34 1 -0.3634 0.5138 0.8900 35 1 -0.3634 0.5138 -0.8900 36 1 -0.3634 -1.0278 -0.0005 37 1 1.8933 -0.5138 -0.8901 38 1 1.8933 -0.5138 0.8899 39 1 1.3879 2.1185 0.0004 40 1 3.1088 3.7701 -0.0006 41 1 3.5762 5.2214 1.0656 42 1 3.6751 7.6808 1.0687 43 1 5.5729 8.8396 0.0146 44 1 7.4784 8.5390 -1.6384 45 1 11.3581 6.2777 -1.3514 46 1 14.1408 5.3704 -2.8154 47 1 13.6231 6.5840 -0.2292 48 1 15.1467 8.3638 -3.8290 49 1 8.7467 9.4023 -2.6706 50 1 7.2643 5.0641 -1.0689 RHF calculation, no. of doubly occupied orbitals= 79 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=-1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9704022_12335884.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:17 Heat of formation + Delta-G solvation = -87.592715 kcal Electronic energy + Delta-G solvation = -39851.957817 eV Core-core repulsion = 34403.000987 eV Total energy + Delta-G solvation = -5448.956831 eV No. of doubly occupied orbitals = 79 Molecular weight (most abundant/longest-lived isotopes) = 507.034 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -44.25290 -41.79569 -39.88177 -39.70882 -38.43323 -37.95074 -36.15446 -35.80633 -35.20632 -33.83540 -32.81907 -31.98066 -31.85285 -31.69933 -30.63338 -30.17577 -28.98582 -26.85245 -25.94774 -24.30926 -24.04267 -23.52227 -23.45181 -22.51992 -21.69429 -21.36113 -19.65465 -19.48901 -18.45685 -18.23526 -17.80673 -17.57805 -17.53491 -17.31876 -17.02598 -16.50724 -16.46342 -16.25175 -16.12547 -16.02441 -15.84031 -15.67605 -15.41715 -15.20565 -15.00915 -14.79630 -14.62646 -14.43486 -14.39105 -14.36802 -13.92570 -13.41512 -13.38139 -13.32979 -13.13754 -13.01871 -12.74512 -12.67109 -12.66181 -12.57823 -12.49419 -12.28249 -12.04066 -12.01329 -11.64396 -11.47399 -11.31840 -11.29553 -11.18889 -10.81825 -10.52294 -10.31022 -10.06305 -9.91645 -9.79379 -9.20116 -9.08679 -9.03861 -7.69172 -0.91260 -0.38231 0.16714 0.20667 0.36744 0.93400 1.12771 1.37060 1.56024 1.61119 1.76542 1.78556 1.90174 2.01166 2.20054 2.69093 2.79012 2.82804 3.01190 3.07260 3.21466 3.32485 3.36328 3.50130 3.53974 3.84677 3.96019 4.09738 4.15550 4.16273 4.20012 4.26123 4.30569 4.38837 4.41453 4.49442 4.50062 4.53648 4.57739 4.60631 4.79421 4.89345 4.98547 5.03030 5.14811 5.20674 5.25065 5.29896 5.36136 5.42456 5.54873 5.57408 5.82201 6.01306 6.03929 6.23321 6.42546 6.51620 6.91151 7.11684 8.06959 Molecular weight = 507.03amu Principal moments of inertia in cm(-1) A = 0.006320 B = 0.001227 C = 0.001076 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 4429.275789 B =22816.724089 C =26024.913019 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.143 4.143 2 C 0.116 3.884 3 N -0.754 5.754 4 C 0.586 3.414 5 O -0.682 6.682 6 C -1.091 5.091 7 S 1.477 4.523 8 O -1.020 7.020 9 C -0.418 4.418 10 C -0.103 4.103 11 C -0.115 4.115 12 C -0.108 4.108 13 C 0.128 3.872 14 N -0.642 5.642 15 C 0.572 3.428 16 O -0.544 6.544 17 C -0.163 4.163 18 C 0.166 3.834 19 N -0.357 5.357 20 C -0.084 4.084 21 C -0.062 4.062 22 O -0.554 6.554 23 Si 1.019 2.981 24 H -0.260 1.260 25 H -0.229 1.229 26 H -0.263 1.263 27 C 0.033 3.967 28 N -0.488 5.488 29 C 0.226 3.774 30 C -0.076 4.076 31 Br 0.011 6.989 32 C -0.024 4.024 33 C -0.069 4.069 34 H 0.060 0.940 35 H 0.070 0.930 36 H 0.092 0.908 37 H 0.045 0.955 38 H 0.028 0.972 39 H 0.395 0.605 40 H 0.107 0.893 41 H 0.093 0.907 42 H 0.155 0.845 43 H 0.177 0.823 44 H 0.431 0.569 45 H 0.194 0.806 46 H 0.136 0.864 47 H 0.389 0.611 48 H 0.216 0.784 49 H 0.188 0.812 50 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.881 23.546 -14.257 32.290 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.009 4.009 3 N -0.406 5.406 4 C 0.394 3.606 5 O -0.579 6.579 6 C -1.223 5.223 7 S 1.684 4.316 8 O -1.016 7.016 9 C -0.515 4.515 10 C -0.123 4.123 11 C -0.134 4.134 12 C -0.128 4.128 13 C 0.034 3.966 14 N -0.289 5.289 15 C 0.361 3.639 16 O -0.421 6.421 17 C -0.170 4.170 18 C 0.040 3.960 19 N -0.030 5.030 20 C -0.195 4.195 21 C -0.170 4.170 22 O -0.361 6.361 23 Si 0.837 3.163 24 H -0.184 1.184 25 H -0.152 1.152 26 H -0.187 1.187 27 C -0.116 4.116 28 N -0.207 5.207 29 C -0.019 4.019 30 C -0.159 4.159 31 Br 0.096 6.904 32 C -0.050 4.050 33 C -0.091 4.091 34 H 0.079 0.921 35 H 0.089 0.911 36 H 0.111 0.889 37 H 0.064 0.936 38 H 0.046 0.954 39 H 0.228 0.772 40 H 0.126 0.874 41 H 0.111 0.889 42 H 0.172 0.828 43 H 0.195 0.805 44 H 0.272 0.728 45 H 0.210 0.790 46 H 0.154 0.846 47 H 0.238 0.762 48 H 0.233 0.767 49 H 0.205 0.795 50 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges 19.125 22.457 -14.878 33.037 hybrid contribution -3.000 0.564 2.580 3.997 sum 16.125 23.021 -12.298 30.680 Atomic orbital electron populations 1.21885 0.91245 1.04157 1.02786 1.21161 0.96397 0.83735 0.99579 1.45656 1.06657 1.07777 1.80519 1.15570 0.81961 0.88229 0.74854 1.90558 1.56500 1.48573 1.62248 1.26859 1.21008 1.00769 1.73693 1.65742 0.83941 0.78314 1.03574 1.94374 1.85044 1.81785 1.40371 1.27902 0.99196 1.20778 1.03578 1.21215 0.97498 0.95824 0.97743 1.21351 0.99516 0.92894 0.99655 1.21287 0.93232 1.01508 0.96751 1.17666 0.89600 0.91030 0.98341 1.42960 1.05433 1.24586 1.55917 1.17872 0.82424 0.83794 0.79851 1.90951 1.83329 1.25015 1.42818 1.18925 0.92990 0.99161 1.05952 1.22219 0.85112 0.97604 0.91071 1.42705 1.08463 1.19054 1.32766 1.22520 0.81944 1.04429 1.10581 1.25245 1.09014 0.95553 0.87212 1.86539 1.80604 1.45021 1.23902 0.84773 0.69969 0.79657 0.81907 1.18402 1.15195 1.18722 1.22957 1.01035 0.90167 0.97425 1.70819 0.97848 1.27929 1.24140 1.20716 0.95777 0.87962 0.97439 1.20498 0.91265 0.98445 1.05654 1.96813 1.95991 1.26064 1.71529 1.21356 0.99967 0.91993 0.91671 1.20757 0.96099 0.94000 0.98226 0.92057 0.91055 0.88926 0.93626 0.95390 0.77152 0.87431 0.88898 0.82751 0.80524 0.72760 0.78952 0.84638 0.76223 0.76736 0.79507 0.84587 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 -3.90 10.03 71.98 0.72 -3.17 16 2 C 0.12 4.73 6.39 86.38 0.55 5.28 16 3 N -0.75 -37.01 5.54 -473.41 -2.62 -39.64 16 4 C 0.59 36.04 7.50 84.71 0.64 36.67 16 5 O -0.68 -46.64 16.28 -4.85 -0.08 -46.72 16 6 C -1.09 -65.00 8.32 68.29 0.57 -64.43 16 7 S 1.48 83.80 12.78 -56.49 -0.72 83.08 16 8 O -1.02 -74.61 18.25 -148.98 -2.72 -77.32 16 9 C -0.42 -19.46 5.67 22.25 0.13 -19.33 16 10 C -0.10 -4.46 8.93 22.29 0.20 -4.26 16 11 C -0.11 -3.52 10.04 22.25 0.22 -3.29 16 12 C -0.11 -2.61 9.96 22.39 0.22 -2.39 16 13 C 0.13 3.62 6.28 38.17 0.24 3.86 16 14 N -0.64 -12.21 5.28 -306.34 -1.62 -13.83 16 15 C 0.57 13.10 7.50 86.70 0.65 13.75 16 16 O -0.54 -17.92 13.96 -4.04 -0.06 -17.98 16 17 C -0.16 -2.77 5.84 -20.35 -0.12 -2.89 16 18 C 0.17 3.01 9.91 83.65 0.83 3.84 16 19 N -0.36 -6.30 2.93 -337.69 -0.99 -7.29 16 20 C -0.08 -1.21 6.24 41.01 0.26 -0.95 16 21 C -0.06 -0.65 3.06 71.24 0.22 -0.43 16 22 O -0.55 -7.51 10.92 -148.98 -1.63 -9.14 16 23 Si 1.02 7.27 26.61 68.60 1.83 9.10 16 24 H -0.26 -2.34 7.11 99.48 0.71 -1.63 16 25 H -0.23 -1.08 6.84 99.48 0.68 -0.40 16 26 H -0.26 -2.69 7.11 99.48 0.71 -1.98 16 27 C 0.03 0.48 10.44 83.68 0.87 1.36 16 28 N -0.49 -9.74 11.30 -194.10 -2.19 -11.93 16 29 C 0.23 4.35 7.59 134.18 1.02 5.37 16 30 C -0.08 -1.21 6.24 22.42 0.14 -1.07 16 31 Br 0.01 0.15 33.72 -20.37 -0.69 -0.54 16 32 C -0.02 -0.30 9.26 22.56 0.21 -0.09 16 33 C -0.07 -2.66 8.36 22.39 0.19 -2.48 16 34 H 0.06 1.60 8.14 -2.39 -0.02 1.58 16 35 H 0.07 1.74 8.14 -2.39 -0.02 1.72 16 36 H 0.09 2.00 8.14 -2.38 -0.02 1.98 16 37 H 0.05 1.89 8.14 -2.38 -0.02 1.87 16 38 H 0.03 1.24 8.14 -2.39 -0.02 1.22 16 39 H 0.40 17.02 8.42 -92.71 -0.78 16.24 16 40 H 0.11 6.08 6.09 -7.38 -0.04 6.03 16 41 H 0.09 4.47 6.49 -2.91 -0.02 4.45 16 42 H 0.15 3.59 8.06 -2.91 -0.02 3.57 16 43 H 0.18 2.33 8.06 -2.91 -0.02 2.31 16 44 H 0.43 3.88 6.87 -92.70 -0.64 3.25 16 45 H 0.19 3.74 6.20 -2.91 -0.02 3.72 16 46 H 0.14 1.15 7.96 -2.39 -0.02 1.14 16 47 H 0.39 3.21 8.70 -74.06 -0.64 2.57 16 48 H 0.22 1.63 6.72 -2.91 -0.02 1.61 16 49 H 0.19 0.93 6.46 -2.91 -0.02 0.91 16 50 H 0.14 5.15 6.41 -2.91 -0.02 5.13 16 Total: -1.00 -107.56 453.32 -4.01 -111.57 By element: Atomic # 1 Polarization: 55.56 SS G_CDS: -0.27 Total: 55.29 kcal Atomic # 6 Polarization: -42.40 SS G_CDS: 7.75 Total: -34.65 kcal Atomic # 7 Polarization: -65.26 SS G_CDS: -7.43 Total: -72.69 kcal Atomic # 8 Polarization: -146.68 SS G_CDS: -4.48 Total: -151.16 kcal Atomic # 14 Polarization: 7.27 SS G_CDS: 1.83 Total: 9.10 kcal Atomic # 16 Polarization: 83.80 SS G_CDS: -0.72 Total: 83.08 kcal Atomic # 35 Polarization: 0.15 SS G_CDS: -0.69 Total: -0.54 kcal Total: -107.56 -4.01 -111.57 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9704022_12335884.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.981 kcal (2) G-P(sol) polarization free energy of solvation -107.562 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -83.581 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -4.012 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -111.574 kcal (6) G-S(sol) free energy of system = (1) + (5) -87.593 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds