Wall clock time and date at job start Tue Mar 9 2021 12:54:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46501 * 1 3 3 N 1.28472 * 124.88372 * 2 1 4 4 C 1.31814 * 110.07307 * 179.97438 * 3 2 1 5 5 C 1.47703 * 126.51754 * 180.02562 * 4 3 2 6 6 O 1.21576 * 119.99645 * 179.97438 * 5 4 3 7 7 N 1.34777 * 120.00389 * 359.96821 * 5 4 3 8 8 C 1.46497 * 120.00213 * 180.02562 * 7 5 4 9 9 H 1.08999 * 112.84811 * 334.66693 * 8 7 5 10 10 C 1.53780 * 113.61446 * 105.86148 * 8 7 5 11 11 C 1.54052 * 86.98334 * 89.16352 * 10 8 7 12 12 H 1.09003 * 113.69096 * 270.86970 * 11 10 8 13 13 C 1.50701 * 113.62369 * 139.97765 * 11 10 8 14 14 C 1.38439 * 120.01540 * 142.22699 * 13 11 10 15 15 F 1.35101 * 120.02330 * 359.97438 * 14 13 11 16 16 C 1.38480 * 119.94437 * 179.77257 * 14 13 11 17 17 C 1.38176 * 119.97882 * 0.48741 * 16 14 13 18 18 C 1.38266 * 120.02154 * 359.78478 * 17 16 14 19 19 C 1.38221 * 120.05627 * 359.96205 * 18 17 16 20 20 C 1.53782 * 113.61306 * 203.47434 * 8 7 5 21 21 C 1.41505 * 106.96012 * 359.74567 * 4 3 2 22 22 C 1.35033 * 124.88650 * 179.97438 * 2 1 3 23 23 C 1.50706 * 126.38051 * 0.03575 * 22 2 1 24 24 O 1.42895 * 109.47065 * 329.99836 * 23 22 2 25 25 Si 1.86301 * 109.46845 * 210.00050 * 23 22 2 26 26 H 1.09001 * 109.46976 * 270.04191 * 1 2 3 27 27 H 1.09003 * 109.46709 * 30.04149 * 1 2 3 28 28 H 1.08998 * 109.47050 * 150.03700 * 1 2 3 29 29 H 0.97002 * 119.99332 * 0.02562 * 7 5 4 30 30 H 1.09000 * 113.61314 * 203.66338 * 10 8 7 31 31 H 1.08989 * 113.61755 * 334.56944 * 10 8 7 32 32 H 1.08005 * 120.01120 * 180.24501 * 16 14 13 33 33 H 1.08003 * 119.98882 * 179.76918 * 17 16 14 34 34 H 1.08001 * 119.97137 * 179.97438 * 18 17 16 35 35 H 1.07993 * 119.98992 * 179.97438 * 19 18 17 36 36 H 1.08998 * 113.61714 * 25.42923 * 20 8 7 37 37 H 1.09002 * 113.61268 * 156.33859 * 20 8 7 38 38 H 1.08000 * 127.24963 * 180.30074 * 21 4 3 39 39 H 1.08999 * 109.47015 * 90.00363 * 23 22 2 40 40 H 0.96703 * 113.99572 * 180.02562 * 24 23 22 41 41 H 1.48507 * 109.99786 * 298.68223 * 25 23 22 42 42 H 1.48498 * 110.00204 * 60.00234 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1998 1.0539 0.0000 4 6 3.4741 0.7169 0.0006 5 6 4.6273 1.6399 0.0013 6 8 5.7597 1.1976 0.0022 7 7 4.4242 2.9722 0.0008 8 6 5.5679 3.8876 0.0009 9 1 6.4655 3.4434 0.4312 10 6 5.8088 4.5727 -1.3546 11 6 4.8538 5.6811 -0.8721 12 1 3.8071 5.4917 -1.1105 13 6 5.2987 7.0696 -1.2530 14 6 4.3626 8.0184 -1.6274 15 9 3.0499 7.7000 -1.6520 16 6 4.7726 9.2953 -1.9726 17 6 6.1160 9.6181 -1.9528 18 6 7.0504 8.6679 -1.5842 19 6 6.6420 7.3946 -1.2343 20 6 5.2411 5.2817 0.5616 21 6 3.5272 -0.6971 0.0069 22 6 2.2373 -1.1077 0.0005 23 6 1.7533 -2.5349 0.0004 24 8 0.4951 -2.6112 0.6734 25 14 2.9940 -3.6114 0.8794 26 1 -0.3633 0.0008 1.0277 27 1 -0.3633 0.8897 -0.5145 28 1 -0.3633 -0.8903 -0.5133 29 1 3.5206 3.3250 0.0003 30 1 6.8350 4.9118 -1.4962 31 1 5.4282 4.0058 -2.2041 32 1 4.0429 10.0375 -2.2610 33 1 6.4362 10.6128 -2.2256 34 1 8.1002 8.9210 -1.5694 35 1 7.3728 6.6532 -0.9470 36 1 4.4025 5.2868 1.2579 37 1 6.1124 5.8143 0.9428 38 1 4.4108 -1.3181 0.0136 39 1 1.6372 -2.8791 -1.0273 40 1 0.1231 -3.5030 0.7118 41 1 4.2984 -3.5656 0.1708 42 1 3.1614 -3.1524 2.2817 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9705094_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:36 Heat of formation + Delta-G solvation = 27.113359 kcal Electronic energy + Delta-G solvation = -27472.808792 eV Core-core repulsion = 23336.807866 eV Total energy + Delta-G solvation = -4136.000926 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -49.95433 -43.99316 -41.56516 -40.20526 -38.78919 -37.90119 -34.93849 -34.40135 -32.89329 -31.82520 -31.44005 -28.72141 -26.95987 -26.82382 -26.28267 -24.63881 -23.67711 -22.67136 -22.35283 -21.07152 -20.27045 -18.85216 -18.55752 -18.39161 -17.83263 -17.51353 -17.44765 -17.09565 -16.81353 -16.68007 -16.13591 -15.80121 -15.69173 -15.28666 -15.26718 -15.07497 -15.01053 -14.62706 -14.19466 -13.99775 -13.98816 -13.72237 -13.53324 -13.47863 -13.10333 -13.06805 -13.00179 -12.41567 -12.18833 -12.11168 -12.00886 -11.84659 -11.49923 -11.32167 -10.95823 -10.44868 -10.18015 -9.97171 -9.90427 -9.60847 -5.03054 0.15141 0.22176 0.26231 0.64034 1.16702 1.49886 1.66737 1.91604 2.03906 2.09902 2.57948 3.00899 3.08992 3.22638 3.35470 3.50488 3.53163 3.58000 3.76925 3.86561 3.88644 4.05151 4.12971 4.20246 4.28448 4.33074 4.33229 4.35938 4.39791 4.46269 4.53613 4.66682 4.66869 4.73332 4.79652 4.89983 4.94677 5.00821 5.01246 5.08579 5.21958 5.33493 5.45688 5.48485 5.55182 5.92854 6.20387 6.64262 6.82417 6.93116 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.086 3.914 2 N -0.258 5.258 3 N -0.262 5.262 4 C -0.037 4.037 5 C 0.608 3.392 6 O -0.566 6.566 7 N -0.689 5.689 8 C 0.113 3.887 9 H 0.100 0.900 10 C -0.135 4.135 11 C -0.073 4.073 12 H 0.091 0.909 13 C -0.111 4.111 14 C 0.070 3.930 15 F -0.153 7.153 16 C -0.163 4.163 17 C -0.098 4.098 18 C -0.126 4.126 19 C -0.094 4.094 20 C -0.120 4.120 21 C -0.216 4.216 22 C 0.030 3.970 23 C -0.044 4.044 24 O -0.558 6.558 25 Si 0.812 3.188 26 H 0.094 0.906 27 H 0.101 0.899 28 H 0.125 0.875 29 H 0.414 0.586 30 H 0.114 0.886 31 H 0.063 0.937 32 H 0.142 0.858 33 H 0.154 0.846 34 H 0.154 0.846 35 H 0.152 0.848 36 H 0.080 0.920 37 H 0.116 0.884 38 H 0.156 0.844 39 H 0.119 0.881 40 H 0.416 0.584 41 H -0.293 1.293 42 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.054 -2.814 -0.903 5.017 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.053 4.053 2 N -0.046 5.046 3 N -0.101 5.101 4 C -0.195 4.195 5 C 0.393 3.607 6 O -0.443 6.443 7 N -0.340 5.340 8 C 0.008 3.992 9 H 0.118 0.882 10 C -0.173 4.173 11 C -0.092 4.092 12 H 0.109 0.891 13 C -0.112 4.112 14 C 0.051 3.949 15 F -0.132 7.132 16 C -0.182 4.182 17 C -0.116 4.116 18 C -0.144 4.144 19 C -0.111 4.111 20 C -0.158 4.158 21 C -0.245 4.245 22 C -0.096 4.096 23 C -0.155 4.155 24 O -0.370 6.370 25 Si 0.718 3.282 26 H 0.113 0.887 27 H 0.120 0.880 28 H 0.144 0.856 29 H 0.251 0.749 30 H 0.132 0.868 31 H 0.082 0.918 32 H 0.160 0.840 33 H 0.172 0.828 34 H 0.171 0.829 35 H 0.170 0.830 36 H 0.098 0.902 37 H 0.135 0.865 38 H 0.174 0.826 39 H 0.136 0.864 40 H 0.269 0.731 41 H -0.221 1.221 42 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges -3.332 -1.607 -0.430 3.724 hybrid contribution -0.323 0.161 -0.275 0.454 sum -3.655 -1.446 -0.705 3.993 Atomic orbital electron populations 1.22604 0.69935 1.06811 1.05904 1.45801 1.09413 1.01553 1.47882 1.73466 1.02436 1.14804 1.19357 1.21752 0.91219 0.93939 1.12598 1.16967 0.86228 0.82109 0.75400 1.90777 1.23791 1.77760 1.51955 1.45471 1.10794 1.04368 1.73360 1.21984 0.89593 0.89512 0.98109 0.88240 1.23607 1.01077 0.95726 0.96915 1.21519 0.99966 0.90201 0.97474 0.89097 1.19865 0.93862 0.95206 1.02300 1.17940 0.77545 0.95202 1.04193 1.91446 1.33750 1.93475 1.94495 1.21413 0.98578 0.95042 1.03118 1.21382 0.91421 1.01142 0.97656 1.21600 1.01387 0.92906 0.98532 1.21207 0.94068 0.97649 0.98217 1.23388 1.03593 0.93439 0.95372 1.21527 0.97137 0.94113 1.11675 1.21476 0.90271 0.91307 1.06542 1.24397 0.95430 0.91584 1.04060 1.86353 1.33794 1.37822 1.79011 0.94584 0.75340 0.83622 0.74676 0.88724 0.88002 0.85643 0.74936 0.86824 0.91783 0.84035 0.82834 0.82863 0.83023 0.90152 0.86530 0.82614 0.86364 0.73067 1.22054 1.23967 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 -0.30 10.12 127.77 1.29 1.00 16 2 N -0.26 -1.33 3.70 -355.92 -1.32 -2.65 16 3 N -0.26 -2.43 11.67 -48.18 -0.56 -2.99 16 4 C -0.04 -0.46 7.13 42.45 0.30 -0.15 16 5 C 0.61 8.00 7.82 86.74 0.68 8.68 16 6 O -0.57 -10.90 16.54 -3.96 -0.07 -10.96 16 7 N -0.69 -4.58 5.26 -443.04 -2.33 -6.91 16 8 C 0.11 0.39 4.29 45.52 0.20 0.58 16 9 H 0.10 0.56 7.50 -2.39 -0.02 0.54 16 10 C -0.13 -0.22 7.27 31.21 0.23 0.01 16 11 C -0.07 -0.12 3.80 -10.92 -0.04 -0.16 16 12 H 0.09 0.33 7.44 -2.39 -0.02 0.32 16 13 C -0.11 -0.30 5.30 -19.82 -0.10 -0.40 16 14 C 0.07 0.39 7.25 22.38 0.16 0.55 16 15 F -0.15 -1.34 16.36 44.97 0.74 -0.60 16 16 C -0.16 -0.39 10.03 22.31 0.22 -0.17 16 17 C -0.10 0.12 10.04 22.26 0.22 0.34 16 18 C -0.13 0.29 10.04 22.27 0.22 0.51 16 19 C -0.09 0.10 8.61 22.26 0.19 0.29 16 20 C -0.12 0.05 7.29 31.12 0.23 0.28 16 21 C -0.22 -2.35 9.35 22.41 0.21 -2.14 16 22 C 0.03 0.16 6.22 41.40 0.26 0.41 16 23 C -0.04 0.19 2.87 71.24 0.20 0.40 16 24 O -0.56 4.44 10.37 -148.98 -1.55 2.89 16 25 Si 0.81 -2.54 31.30 68.60 2.15 -0.39 16 26 H 0.09 -0.41 8.14 -2.39 -0.02 -0.43 16 27 H 0.10 -0.55 8.14 -2.39 -0.02 -0.57 16 28 H 0.13 -0.94 6.77 -2.39 -0.02 -0.96 16 29 H 0.41 1.68 8.43 -92.71 -0.78 0.90 16 30 H 0.11 -0.19 6.32 -2.39 -0.02 -0.21 16 31 H 0.06 0.29 8.14 -2.39 -0.02 0.27 16 32 H 0.14 -0.01 8.06 -2.91 -0.02 -0.03 16 33 H 0.15 -0.92 8.06 -2.91 -0.02 -0.95 16 34 H 0.15 -1.09 8.06 -2.91 -0.02 -1.12 16 35 H 0.15 -0.80 6.66 -2.91 -0.02 -0.82 16 36 H 0.08 -0.03 8.14 -2.39 -0.02 -0.05 16 37 H 0.12 -0.38 7.72 -2.39 -0.02 -0.40 16 38 H 0.16 1.75 6.90 -2.91 -0.02 1.73 16 39 H 0.12 -1.15 7.96 -2.39 -0.02 -1.17 16 40 H 0.42 -7.75 8.74 -74.06 -0.65 -8.40 16 41 H -0.29 -1.16 6.94 99.48 0.69 -0.47 16 42 H -0.31 -2.16 7.11 99.48 0.71 -1.46 16 Total: 0.00 -26.05 357.87 1.21 -24.84 By element: Atomic # 1 Polarization: -12.93 SS G_CDS: -0.32 Total: -13.26 kcal Atomic # 6 Polarization: 5.56 SS G_CDS: 4.47 Total: 10.03 kcal Atomic # 7 Polarization: -8.34 SS G_CDS: -4.21 Total: -12.55 kcal Atomic # 8 Polarization: -6.46 SS G_CDS: -1.61 Total: -8.07 kcal Atomic # 9 Polarization: -1.34 SS G_CDS: 0.74 Total: -0.60 kcal Atomic # 14 Polarization: -2.54 SS G_CDS: 2.15 Total: -0.39 kcal Total: -26.05 1.21 -24.84 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9705094_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 51.952 kcal (2) G-P(sol) polarization free energy of solvation -26.053 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.839 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.113 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds