Wall clock time and date at job start Tue Mar 9 2021 12:54:56 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 N 1.28473 * 124.88241 * 2 1 4 4 C 1.31800 * 110.07096 * 179.97438 * 3 2 1 5 5 C 1.47716 * 126.51826 * 179.97438 * 4 3 2 6 6 O 1.21573 * 120.00104 * 180.02562 * 5 4 3 7 7 N 1.34773 * 119.99720 * 0.03192 * 5 4 3 8 8 C 1.46506 * 119.99969 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.84718 * 23.52423 * 8 7 5 10 10 C 1.53776 * 113.61435 * 154.72248 * 8 7 5 11 11 C 1.53775 * 87.08332 * 89.11483 * 10 8 7 12 12 H 1.08998 * 113.61538 * 270.80224 * 11 10 8 13 13 C 1.50699 * 113.61708 * 139.97745 * 11 10 8 14 14 C 1.38177 * 119.99018 * 299.72878 * 13 11 10 15 15 C 1.38478 * 119.97901 * 179.72381 * 14 13 11 16 16 F 1.35099 * 120.03051 * 180.25279 * 15 14 13 17 17 C 1.38443 * 119.94582 * 0.54842 * 15 14 13 18 18 C 1.38224 * 119.97296 * 359.72151 * 17 15 14 19 19 C 1.38227 * 120.02515 * 0.02562 * 18 17 15 20 20 C 1.53780 * 113.61356 * 252.21861 * 8 7 5 21 21 C 1.41506 * 106.96729 * 0.22462 * 4 3 2 22 22 C 1.35027 * 124.88734 * 179.97438 * 2 1 3 23 23 C 1.50709 * 126.38343 * 0.03193 * 22 2 1 24 24 O 1.42895 * 109.47184 * 330.00104 * 23 22 2 25 25 Si 1.86297 * 109.47157 * 210.00170 * 23 22 2 26 26 H 1.09002 * 109.47247 * 90.02960 * 1 2 3 27 27 H 1.09002 * 109.47336 * 210.02832 * 1 2 3 28 28 H 1.08997 * 109.47396 * 330.02885 * 1 2 3 29 29 H 0.97005 * 120.00161 * 359.71797 * 7 5 4 30 30 H 1.09001 * 113.61146 * 203.66563 * 10 8 7 31 31 H 1.08997 * 113.61939 * 334.56301 * 10 8 7 32 32 H 1.08010 * 120.00839 * 359.97438 * 14 13 11 33 33 H 1.07996 * 120.01214 * 179.70588 * 17 15 14 34 34 H 1.08002 * 119.98617 * 180.02562 * 18 17 15 35 35 H 1.07994 * 119.97279 * 180.02562 * 19 18 17 36 36 H 1.09004 * 113.61553 * 25.43075 * 20 8 7 37 37 H 1.08999 * 113.61363 * 156.33018 * 20 8 7 38 38 H 1.07997 * 127.24787 * 179.75262 * 21 4 3 39 39 H 1.09001 * 109.46538 * 90.00181 * 23 22 2 40 40 H 0.96700 * 114.00030 * 179.97438 * 24 23 22 41 41 H 1.48504 * 109.99873 * 298.68137 * 25 23 22 42 42 H 1.48499 * 110.00071 * 59.99923 * 25 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0539 0.0000 4 6 3.4739 0.7170 0.0006 5 6 4.6272 1.6400 0.0002 6 8 5.7597 1.1978 0.0003 7 7 4.4240 2.9723 -0.0001 8 6 5.5678 3.8877 0.0001 9 1 6.4738 3.4331 -0.4004 10 6 5.2528 5.2673 -0.6019 11 6 4.8363 5.7024 0.8130 12 1 3.7850 5.5187 1.0346 13 6 5.2736 7.1001 1.1681 14 6 6.6172 7.4228 1.1741 15 6 7.0185 8.7088 1.4948 16 9 8.3315 9.0268 1.4961 17 6 6.0734 9.6667 1.8202 18 6 4.7303 9.3401 1.8190 19 6 4.3307 8.0575 1.4936 20 6 5.7794 4.6089 1.3418 21 6 3.5272 -0.6971 -0.0044 22 6 2.2373 -1.1076 0.0005 23 6 1.7534 -2.5349 0.0005 24 8 0.4952 -2.6113 0.6735 25 14 2.9941 -3.6113 0.8794 26 1 -0.3634 -0.0005 -1.0277 27 1 -0.3634 -0.8897 0.5143 28 1 -0.3634 0.8902 0.5134 29 1 3.5204 3.3251 -0.0042 30 1 6.1318 5.7903 -0.9785 31 1 4.4287 5.2546 -1.3152 32 1 7.3539 6.6734 0.9247 33 1 6.3855 10.6687 2.0752 34 1 3.9929 10.0874 2.0724 35 1 3.2811 7.8034 1.4924 36 1 5.3803 4.0646 2.1978 37 1 6.8024 4.9518 1.4966 38 1 4.4108 -1.3179 -0.0091 39 1 1.6373 -2.8790 -1.0273 40 1 0.1228 -3.5029 0.7113 41 1 4.2984 -3.5655 0.1708 42 1 3.1616 -3.1523 2.2817 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9705262_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:56 Heat of formation + Delta-G solvation = 28.064101 kcal Electronic energy + Delta-G solvation = -27197.920010 eV Core-core repulsion = 23061.960311 eV Total energy + Delta-G solvation = -4135.959699 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -49.95359 -43.97256 -41.61482 -40.25342 -38.72380 -37.93119 -34.90514 -34.36305 -32.87215 -31.82982 -31.50391 -28.71039 -26.96946 -26.79468 -26.28219 -24.60028 -23.66395 -22.70828 -22.35547 -21.07220 -20.32513 -18.74993 -18.53817 -18.37864 -17.69758 -17.44032 -17.30586 -17.08743 -17.02179 -16.66090 -16.15882 -15.92035 -15.74365 -15.48013 -15.25210 -15.13793 -14.82041 -14.70580 -14.24505 -14.03221 -13.94542 -13.66535 -13.53880 -13.45209 -13.02579 -13.00115 -12.93222 -12.50710 -12.17870 -12.06807 -12.04985 -11.78164 -11.49115 -11.28172 -10.91110 -10.43650 -10.14941 -9.96537 -9.91797 -9.64961 -5.02331 0.13646 0.19984 0.28227 0.64818 1.17699 1.52151 1.67175 1.93091 2.05023 2.11621 2.54176 2.97864 3.11404 3.18458 3.40436 3.47713 3.57790 3.61130 3.77374 3.87780 3.93926 4.03441 4.19309 4.20100 4.23356 4.30288 4.36717 4.38717 4.42331 4.46082 4.55287 4.68381 4.75222 4.80609 4.84142 4.88872 4.93675 5.04456 5.04946 5.08244 5.14784 5.32551 5.42345 5.55284 5.57909 5.90788 6.23895 6.66682 6.83140 6.96382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.068 3.932 2 N -0.256 5.256 3 N -0.258 5.258 4 C -0.037 4.037 5 C 0.607 3.393 6 O -0.569 6.569 7 N -0.685 5.685 8 C 0.111 3.889 9 H 0.091 0.909 10 C -0.122 4.122 11 C -0.064 4.064 12 H 0.117 0.883 13 C -0.046 4.046 14 C -0.160 4.160 15 C 0.073 3.927 16 F -0.154 7.154 17 C -0.167 4.167 18 C -0.089 4.089 19 C -0.127 4.127 20 C -0.144 4.144 21 C -0.218 4.218 22 C 0.029 3.971 23 C -0.042 4.042 24 O -0.557 6.557 25 Si 0.811 3.189 26 H 0.100 0.900 27 H 0.136 0.864 28 H 0.101 0.899 29 H 0.417 0.583 30 H 0.104 0.896 31 H 0.091 0.909 32 H 0.139 0.861 33 H 0.143 0.857 34 H 0.157 0.843 35 H 0.152 0.848 36 H 0.067 0.933 37 H 0.098 0.902 38 H 0.154 0.846 39 H 0.119 0.881 40 H 0.416 0.584 41 H -0.295 1.295 42 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.719 -4.076 -1.357 11.548 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 N -0.045 5.045 3 N -0.097 5.097 4 C -0.195 4.195 5 C 0.392 3.608 6 O -0.447 6.447 7 N -0.336 5.336 8 C 0.006 3.994 9 H 0.109 0.891 10 C -0.160 4.160 11 C -0.082 4.082 12 H 0.135 0.865 13 C -0.046 4.046 14 C -0.178 4.178 15 C 0.054 3.946 16 F -0.133 7.133 17 C -0.186 4.186 18 C -0.107 4.107 19 C -0.144 4.144 20 C -0.182 4.182 21 C -0.246 4.246 22 C -0.097 4.097 23 C -0.153 4.153 24 O -0.369 6.369 25 Si 0.717 3.283 26 H 0.118 0.882 27 H 0.154 0.846 28 H 0.119 0.881 29 H 0.255 0.745 30 H 0.122 0.878 31 H 0.109 0.891 32 H 0.157 0.843 33 H 0.161 0.839 34 H 0.174 0.826 35 H 0.169 0.831 36 H 0.086 0.914 37 H 0.117 0.883 38 H 0.172 0.828 39 H 0.136 0.864 40 H 0.270 0.730 41 H -0.222 1.222 42 H -0.239 1.239 Dipole moment (debyes) X Y Z Total from point charges -9.886 -2.845 -0.893 10.326 hybrid contribution 0.902 0.304 -0.113 0.958 sum -8.985 -2.541 -1.006 9.391 Atomic orbital electron populations 1.22932 0.69953 1.07902 1.06197 1.45812 1.09397 1.01490 1.47835 1.73438 1.02270 1.14777 1.19182 1.21718 0.91244 0.93829 1.12694 1.16996 0.86172 0.82254 0.75382 1.90785 1.24009 1.77840 1.52020 1.45393 1.10756 1.04137 1.73309 1.21966 0.89619 0.89734 0.98072 0.89077 1.23372 1.03518 0.93015 0.96112 1.21621 1.00701 0.89336 0.96590 0.86474 1.19653 0.91858 0.95916 0.97166 1.21127 0.97669 0.95062 1.03965 1.18027 0.77675 0.95151 1.03708 1.91476 1.33884 1.93541 1.94428 1.21434 0.93663 1.00070 1.03450 1.21362 0.94901 0.97405 0.97020 1.21483 1.00843 0.92800 0.99314 1.23571 1.01023 0.96461 0.97157 1.21526 0.97109 0.94254 1.11694 1.21427 0.90257 0.91319 1.06674 1.24377 0.95175 0.91647 1.04054 1.86205 1.33881 1.37805 1.79057 0.94578 0.75352 0.83643 0.74708 0.88166 0.84582 0.88071 0.74545 0.87801 0.89092 0.84294 0.83919 0.82554 0.83072 0.91372 0.88324 0.82807 0.86386 0.72952 1.22228 1.23899 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 -0.34 11.00 127.77 1.41 1.07 16 2 N -0.26 -0.95 3.70 -355.92 -1.32 -2.26 16 3 N -0.26 -1.89 11.67 -48.17 -0.56 -2.45 16 4 C -0.04 -0.40 7.13 42.46 0.30 -0.10 16 5 C 0.61 7.29 7.83 86.75 0.68 7.96 16 6 O -0.57 -10.86 16.52 -3.94 -0.07 -10.93 16 7 N -0.69 -3.07 5.26 -443.03 -2.33 -5.40 16 8 C 0.11 0.28 4.33 45.51 0.20 0.48 16 9 H 0.09 0.59 7.46 -2.39 -0.02 0.57 16 10 C -0.12 0.30 7.29 31.12 0.23 0.52 16 11 C -0.06 0.16 3.86 -11.02 -0.04 0.12 16 12 H 0.12 -0.61 8.09 -2.39 -0.02 -0.63 16 13 C -0.05 0.01 5.29 -19.87 -0.11 -0.10 16 14 C -0.16 -0.46 8.60 22.31 0.19 -0.27 16 15 C 0.07 0.41 7.30 22.38 0.16 0.57 16 16 F -0.15 -1.42 17.27 44.97 0.78 -0.64 16 17 C -0.17 -0.37 10.03 22.32 0.22 -0.15 16 18 C -0.09 0.12 10.04 22.26 0.22 0.35 16 19 C -0.13 0.24 9.71 22.27 0.22 0.45 16 20 C -0.14 -0.13 7.25 31.12 0.23 0.10 16 21 C -0.22 -2.18 9.35 22.41 0.21 -1.97 16 22 C 0.03 0.12 6.21 41.41 0.26 0.38 16 23 C -0.04 0.22 2.98 71.24 0.21 0.43 16 24 O -0.56 5.11 9.76 -148.98 -1.45 3.65 16 25 Si 0.81 -2.97 31.32 68.60 2.15 -0.83 16 26 H 0.10 -0.81 8.14 -2.39 -0.02 -0.83 16 27 H 0.14 -0.96 5.19 -2.39 -0.01 -0.97 16 28 H 0.10 -0.66 8.14 -2.39 -0.02 -0.68 16 29 H 0.42 0.16 8.43 -92.70 -0.78 -0.62 16 30 H 0.10 -0.28 7.73 -2.39 -0.02 -0.29 16 31 H 0.09 -0.37 8.14 -2.39 -0.02 -0.39 16 32 H 0.14 0.18 6.64 -2.91 -0.02 0.16 16 33 H 0.14 -0.05 8.06 -2.91 -0.02 -0.07 16 34 H 0.16 -1.01 8.06 -2.91 -0.02 -1.03 16 35 H 0.15 -1.00 8.05 -2.91 -0.02 -1.02 16 36 H 0.07 0.21 8.14 -2.38 -0.02 0.19 16 37 H 0.10 0.06 6.29 -2.39 -0.02 0.04 16 38 H 0.15 1.66 6.92 -2.91 -0.02 1.64 16 39 H 0.12 -1.22 7.96 -2.39 -0.02 -1.24 16 40 H 0.42 -8.25 8.74 -74.06 -0.65 -8.90 16 41 H -0.29 -1.09 6.94 99.48 0.69 -0.40 16 42 H -0.31 -1.97 7.11 99.48 0.71 -1.27 16 Total: 0.00 -26.22 357.94 1.46 -24.76 By element: Atomic # 1 Polarization: -15.43 SS G_CDS: -0.32 Total: -15.75 kcal Atomic # 6 Polarization: 5.26 SS G_CDS: 4.59 Total: 9.85 kcal Atomic # 7 Polarization: -5.90 SS G_CDS: -4.21 Total: -10.11 kcal Atomic # 8 Polarization: -5.75 SS G_CDS: -1.52 Total: -7.27 kcal Atomic # 9 Polarization: -1.42 SS G_CDS: 0.78 Total: -0.64 kcal Atomic # 14 Polarization: -2.97 SS G_CDS: 2.15 Total: -0.83 kcal Total: -26.22 1.46 -24.76 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9705262_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.823 kcal (2) G-P(sol) polarization free energy of solvation -26.222 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 26.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.464 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.759 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.064 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds