Wall clock time and date at job start Tue Mar 9 2021 12:55:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 N 1.28469 * 124.88455 * 2 1 4 4 C 1.31807 * 110.06978 * 180.12818 * 3 2 1 5 5 C 1.47721 * 126.51598 * 179.85695 * 4 3 2 6 6 O 1.21572 * 119.99703 * 179.68512 * 5 4 3 7 7 N 1.34774 * 119.99912 * 359.68627 * 5 4 3 8 8 C 1.46497 * 120.00262 * 180.02562 * 7 5 4 9 9 H 1.09006 * 112.84548 * 336.19511 * 8 7 5 10 10 C 1.53948 * 113.53778 * 107.50496 * 8 7 5 11 11 C 1.53778 * 87.02231 * 89.19154 * 10 8 7 12 12 H 1.08997 * 113.61088 * 270.77088 * 11 10 8 13 13 C 1.50694 * 113.61655 * 139.94990 * 11 10 8 14 14 C 1.38206 * 119.97465 * 140.86190 * 13 11 10 15 15 C 1.38475 * 120.02649 * 179.97438 * 14 13 11 16 16 F 1.35101 * 120.01373 * 179.72764 * 15 14 13 17 17 C 1.38418 * 119.97347 * 359.97438 * 15 14 13 18 18 C 1.38422 * 119.95048 * 0.02562 * 17 15 14 19 19 F 1.35098 * 120.01109 * 179.97438 * 18 17 15 20 20 C 1.38207 * 119.97590 * 320.84506 * 13 11 10 21 21 C 1.53777 * 113.61605 * 205.00537 * 8 7 5 22 22 C 1.41500 * 106.96942 * 359.59416 * 4 3 2 23 23 C 1.35041 * 124.88457 * 179.66700 * 2 1 3 24 24 C 1.50700 * 126.38289 * 0.02562 * 23 2 1 25 25 O 1.42894 * 109.47319 * 329.99939 * 24 23 2 26 26 Si 1.86306 * 109.46906 * 209.99945 * 24 23 2 27 27 H 1.08999 * 109.47520 * 270.33069 * 1 2 3 28 28 H 1.09002 * 109.47010 * 30.33479 * 1 2 3 29 29 H 1.09003 * 109.47016 * 150.33114 * 1 2 3 30 30 H 0.97001 * 119.99866 * 359.97438 * 7 5 4 31 31 H 1.09002 * 113.66738 * 334.66203 * 10 8 7 32 32 H 1.09008 * 113.61434 * 203.71333 * 10 8 7 33 33 H 1.07999 * 119.99100 * 0.02562 * 14 13 11 34 34 H 1.08000 * 120.02476 * 179.97438 * 17 15 14 35 35 H 1.07998 * 119.98994 * 359.97438 * 20 13 11 36 36 H 1.09003 * 113.61641 * 156.33734 * 21 8 7 37 37 H 1.08999 * 113.69541 * 25.43452 * 21 8 7 38 38 H 1.07996 * 127.25056 * 180.26445 * 22 4 3 39 39 H 1.09005 * 109.46721 * 90.00280 * 24 23 2 40 40 H 0.96691 * 114.00174 * 300.00030 * 25 24 23 41 41 H 1.48494 * 109.99914 * 58.68368 * 26 24 23 42 42 H 1.48499 * 109.99824 * 180.02562 * 26 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 7 2.1997 1.0538 0.0000 4 6 3.4740 0.7168 -0.0028 5 6 4.6273 1.6398 -0.0067 6 8 5.7597 1.1975 -0.0032 7 7 4.4241 2.9721 -0.0141 8 6 5.5679 3.8875 -0.0185 9 1 6.4724 3.4367 0.3899 10 6 5.7833 4.5958 -1.3683 11 6 4.8396 5.6944 -0.8513 12 1 3.7892 5.5086 -1.0753 13 6 5.2784 7.0887 -1.2178 14 6 4.3395 8.0337 -1.5861 15 6 4.7415 9.3154 -1.9225 16 9 3.8240 10.2373 -2.2878 17 6 6.0841 9.6501 -1.8894 18 6 7.0236 8.7029 -1.5203 19 9 8.3345 9.0282 -1.4880 20 6 6.6194 7.4217 -1.1850 21 6 5.2506 5.2726 0.5693 22 6 3.5272 -0.6972 0.0049 23 6 2.2373 -1.1077 0.0064 24 6 1.7533 -2.5349 0.0142 25 8 0.4952 -2.6076 0.6878 26 14 2.9942 -3.6066 0.8989 27 1 -0.3634 0.0059 1.0276 28 1 -0.3633 0.8870 -0.5190 29 1 -0.3633 -0.8930 -0.5087 30 1 3.5206 3.3249 -0.0172 31 1 5.3858 4.0441 -2.2203 32 1 6.8068 4.9369 -1.5240 33 1 3.2918 7.7727 -1.6107 34 1 6.3986 10.6494 -2.1520 35 1 7.3522 6.6827 -0.8964 36 1 6.1282 5.7993 0.9444 37 1 4.4239 5.2681 1.2797 38 1 4.4108 -1.3181 0.0091 39 1 1.6371 -2.8846 -1.0117 40 1 0.5238 -2.3110 1.6076 41 1 3.1855 -3.1205 2.2889 42 1 2.5289 -5.0167 0.9128 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9705374_13259642.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:11 Heat of formation + Delta-G solvation = -16.184317 kcal Electronic energy + Delta-G solvation = -29419.444292 eV Core-core repulsion = 24812.111862 eV Total energy + Delta-G solvation = -4607.332430 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.123 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -50.08000 -50.05710 -43.83253 -41.53686 -40.14914 -38.59405 -38.15028 -34.75067 -34.24305 -32.64579 -31.87974 -31.33375 -28.63742 -26.98011 -26.69958 -26.37574 -24.50118 -23.88079 -22.86857 -22.19747 -21.08619 -20.37762 -19.23371 -18.88740 -18.12002 -17.64439 -17.56504 -17.42816 -17.15887 -17.04957 -16.95031 -16.70586 -16.37610 -16.13992 -15.88397 -15.69938 -15.48204 -15.44235 -15.32220 -14.85520 -14.62186 -14.09281 -14.05324 -13.71423 -13.63556 -13.45750 -13.39491 -13.09219 -12.92732 -12.77866 -12.68100 -12.27711 -12.09415 -11.99406 -11.70300 -11.33553 -11.28007 -11.06826 -10.29098 -10.01500 -9.96371 -9.89665 -9.81290 -4.88241 -0.10512 -0.08847 0.44507 0.83109 1.23301 1.54963 1.68143 1.94843 2.09279 2.24699 2.30713 2.77207 3.10247 3.26050 3.31761 3.35719 3.38756 3.56415 3.67315 3.77125 3.90614 3.92123 4.00954 4.07524 4.12331 4.30559 4.36733 4.45181 4.49912 4.60153 4.66136 4.70824 4.72825 4.75530 4.78198 4.78581 4.87736 4.96810 4.97918 5.05053 5.13983 5.26473 5.33596 5.58336 5.68237 5.71376 6.28436 6.39279 6.82565 7.12931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.265 5.265 3 N -0.264 5.264 4 C -0.040 4.040 5 C 0.607 3.393 6 O -0.563 6.563 7 N -0.691 5.691 8 C 0.113 3.887 9 H 0.096 0.904 10 C -0.141 4.141 11 C -0.068 4.068 12 H 0.118 0.882 13 C -0.008 4.008 14 C -0.156 4.156 15 C 0.117 3.883 16 F -0.140 7.140 17 C -0.205 4.205 18 C 0.119 3.881 19 F -0.140 7.140 20 C -0.158 4.158 21 C -0.124 4.124 22 C -0.187 4.187 23 C -0.013 4.013 24 C -0.044 4.044 25 O -0.538 6.538 26 Si 0.782 3.218 27 H 0.100 0.900 28 H 0.102 0.898 29 H 0.116 0.884 30 H 0.415 0.585 31 H 0.071 0.929 32 H 0.104 0.896 33 H 0.160 0.840 34 H 0.151 0.849 35 H 0.160 0.840 36 H 0.109 0.891 37 H 0.089 0.911 38 H 0.182 0.818 39 H 0.146 0.854 40 H 0.388 0.612 41 H -0.294 1.294 42 H -0.285 1.285 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.530 -2.440 0.389 5.160 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.054 5.054 3 N -0.102 5.102 4 C -0.198 4.198 5 C 0.392 3.608 6 O -0.440 6.440 7 N -0.341 5.341 8 C 0.008 3.992 9 H 0.114 0.886 10 C -0.179 4.179 11 C -0.086 4.086 12 H 0.136 0.864 13 C -0.009 4.009 14 C -0.175 4.175 15 C 0.098 3.902 16 F -0.119 7.119 17 C -0.224 4.224 18 C 0.100 3.900 19 F -0.118 7.118 20 C -0.176 4.176 21 C -0.162 4.162 22 C -0.215 4.215 23 C -0.139 4.139 24 C -0.154 4.154 25 O -0.345 6.345 26 Si 0.685 3.315 27 H 0.118 0.882 28 H 0.121 0.879 29 H 0.134 0.866 30 H 0.252 0.748 31 H 0.090 0.910 32 H 0.123 0.877 33 H 0.177 0.823 34 H 0.169 0.831 35 H 0.177 0.823 36 H 0.127 0.873 37 H 0.107 0.893 38 H 0.199 0.801 39 H 0.163 0.837 40 H 0.238 0.762 41 H -0.221 1.221 42 H -0.212 1.212 Dipole moment (debyes) X Y Z Total from point charges -4.615 -2.514 0.475 5.277 hybrid contribution -0.619 0.607 0.509 1.005 sum -5.234 -1.907 0.984 5.657 Atomic orbital electron populations 1.22605 0.70774 1.06728 1.06000 1.45688 1.08973 1.01926 1.48816 1.73454 1.02689 1.14698 1.19321 1.21808 0.90884 0.94464 1.12623 1.17008 0.86322 0.82082 0.75338 1.90795 1.23788 1.77699 1.51681 1.45443 1.10628 1.04447 1.73623 1.21974 0.89813 0.89601 0.97811 0.88588 1.23614 1.00967 0.95969 0.97349 1.21696 1.01196 0.88539 0.97203 0.86366 1.19437 0.91283 0.95536 0.94609 1.21355 1.02525 0.90993 1.02645 1.17448 0.85601 0.87347 0.99792 1.91530 1.65618 1.65616 1.89118 1.21181 0.91826 1.02173 1.07250 1.17409 0.77636 0.94021 1.00945 1.91533 1.32964 1.93279 1.94039 1.21272 0.97684 0.95125 1.03534 1.23414 1.03718 0.93467 0.95610 1.21726 0.97424 0.93580 1.08756 1.22167 0.91015 0.92065 1.08612 1.24834 0.93371 0.92105 1.05119 1.86579 1.29304 1.88394 1.30238 0.93232 0.83956 0.74781 0.79515 0.88200 0.87942 0.86609 0.74769 0.90976 0.87733 0.82259 0.83096 0.82261 0.87288 0.89266 0.80130 0.83703 0.76198 1.22083 1.21185 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.61 10.12 127.77 1.29 0.69 16 2 N -0.26 0.25 3.70 -355.92 -1.32 -1.06 16 3 N -0.26 -0.67 11.67 -48.17 -0.56 -1.23 16 4 C -0.04 -0.19 7.13 42.46 0.30 0.11 16 5 C 0.61 3.83 7.83 86.75 0.68 4.51 16 6 O -0.56 -7.14 16.52 -3.94 -0.07 -7.21 16 7 N -0.69 0.12 5.26 -442.76 -2.33 -2.21 16 8 C 0.11 -0.27 4.33 45.57 0.20 -0.07 16 9 H 0.10 0.11 7.46 -2.38 -0.02 0.09 16 10 C -0.14 0.59 7.27 31.18 0.23 0.82 16 11 C -0.07 0.45 3.85 -11.01 -0.04 0.40 16 12 H 0.12 -1.03 8.08 -2.39 -0.02 -1.05 16 13 C -0.01 0.03 5.29 -19.88 -0.11 -0.08 16 14 C -0.16 0.32 9.69 22.32 0.22 0.53 16 15 C 0.12 0.22 7.30 22.37 0.16 0.38 16 16 F -0.14 -0.64 17.27 44.97 0.78 0.13 16 17 C -0.20 -0.41 10.01 22.36 0.22 -0.19 16 18 C 0.12 0.22 7.30 22.37 0.16 0.38 16 19 F -0.14 -0.64 17.27 44.97 0.78 0.13 16 20 C -0.16 0.32 8.51 22.32 0.19 0.51 16 21 C -0.12 0.83 7.29 31.12 0.23 1.06 16 22 C -0.19 -0.38 9.35 22.41 0.21 -0.17 16 23 C -0.01 0.02 6.18 41.40 0.26 0.27 16 24 C -0.04 0.24 2.87 71.24 0.20 0.44 16 25 O -0.54 2.92 10.40 -148.98 -1.55 1.37 16 26 Si 0.78 -3.35 31.23 68.60 2.14 -1.20 16 27 H 0.10 -1.06 8.14 -2.39 -0.02 -1.08 16 28 H 0.10 -0.94 8.14 -2.39 -0.02 -0.96 16 29 H 0.12 -1.04 6.77 -2.39 -0.02 -1.06 16 30 H 0.42 -1.48 8.43 -92.71 -0.78 -2.26 16 31 H 0.07 -0.15 8.14 -2.39 -0.02 -0.17 16 32 H 0.10 -0.56 6.39 -2.38 -0.02 -0.58 16 33 H 0.16 -0.93 8.05 -2.91 -0.02 -0.96 16 34 H 0.15 0.07 8.06 -2.91 -0.02 0.05 16 35 H 0.16 -0.86 6.72 -2.91 -0.02 -0.88 16 36 H 0.11 -0.83 7.64 -2.39 -0.02 -0.85 16 37 H 0.09 -0.68 8.14 -2.39 -0.02 -0.69 16 38 H 0.18 -0.20 7.02 -2.91 -0.02 -0.22 16 39 H 0.15 -1.19 7.96 -2.38 -0.02 -1.21 16 40 H 0.39 -3.81 8.70 -74.06 -0.64 -4.45 16 41 H -0.29 -0.65 7.11 99.48 0.71 0.06 16 42 H -0.29 -0.50 7.11 99.48 0.71 0.21 16 Total: 0.00 -19.68 365.70 2.00 -17.68 By element: Atomic # 1 Polarization: -15.73 SS G_CDS: -0.28 Total: -16.01 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 4.41 Total: 9.60 kcal Atomic # 7 Polarization: -0.30 SS G_CDS: -4.21 Total: -4.51 kcal Atomic # 8 Polarization: -4.22 SS G_CDS: -1.61 Total: -5.83 kcal Atomic # 9 Polarization: -1.28 SS G_CDS: 1.55 Total: 0.27 kcal Atomic # 14 Polarization: -3.35 SS G_CDS: 2.14 Total: -1.20 kcal Total: -19.68 2.00 -17.68 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9705374_13259642.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 1.496 kcal (2) G-P(sol) polarization free energy of solvation -19.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -18.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.999 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.680 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.184 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds