Wall clock time and date at job start Tue Mar 9 2021 12:56:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.35964 * 117.00019 * 2 1 4 4 C 1.38907 * 120.06187 * 179.97438 * 3 2 1 5 5 F 1.35100 * 120.04708 * 359.74380 * 4 3 2 6 6 C 1.38332 * 119.90290 * 179.72002 * 4 3 2 7 7 C 1.38256 * 120.03162 * 0.02562 * 6 4 3 8 8 C 1.50697 * 119.93992 * 179.97438 * 7 6 4 9 9 H 1.09000 * 112.84707 * 350.33662 * 8 7 6 10 10 C 1.53783 * 113.61250 * 121.53375 * 8 7 6 11 11 C 1.53781 * 87.08110 * 139.98565 * 10 8 7 12 12 H 1.09006 * 113.60651 * 219.93470 * 11 10 8 13 13 N 1.46493 * 113.61771 * 89.11550 * 11 10 8 14 14 C 1.34776 * 119.99976 * 154.99626 * 13 11 10 15 15 O 1.21277 * 120.00447 * 0.02562 * 14 13 11 16 16 C 1.50706 * 119.99802 * 179.97438 * 14 13 11 17 17 C 1.53000 * 109.47307 * 300.00436 * 16 14 13 18 18 O 1.42896 * 109.46979 * 180.02562 * 16 14 13 19 19 C 1.35908 * 117.00084 * 204.95335 * 18 16 14 20 20 C 1.38729 * 120.05429 * 174.27848 * 19 18 16 21 21 C 1.38141 * 119.94244 * 179.69868 * 20 19 18 22 22 C 1.38272 * 120.05524 * 0.59204 * 21 20 19 23 23 C 1.50695 * 119.94591 * 179.70074 * 22 21 20 24 24 O 1.42905 * 109.47045 * 119.98023 * 23 22 21 25 25 Si 1.86302 * 109.47272 * 359.97438 * 23 22 21 26 26 C 1.38267 * 120.10706 * 359.68474 * 22 21 20 27 27 C 1.38140 * 120.05746 * 0.02562 * 26 22 21 28 28 C 1.53780 * 113.61916 * 219.13907 * 8 7 6 29 29 C 1.38262 * 120.12319 * 359.95898 * 7 6 4 30 30 C 1.38186 * 120.09924 * 0.03653 * 29 7 6 31 31 H 1.08998 * 109.47460 * 300.00448 * 1 2 3 32 32 H 1.09003 * 109.46692 * 60.00666 * 1 2 3 33 33 H 1.08999 * 109.46934 * 180.02562 * 1 2 3 34 34 H 1.07999 * 119.98606 * 180.02562 * 6 4 3 35 35 H 1.09006 * 113.61252 * 254.53326 * 10 8 7 36 36 H 1.08994 * 113.61715 * 25.34630 * 10 8 7 37 37 H 0.97006 * 119.99920 * 335.00113 * 13 11 10 38 38 H 1.09006 * 109.47000 * 60.00672 * 16 14 13 39 39 H 1.09003 * 109.47208 * 180.02562 * 17 16 14 40 40 H 1.08996 * 109.46825 * 299.99780 * 17 16 14 41 41 H 1.08999 * 109.47176 * 60.00114 * 17 16 14 42 42 H 1.08002 * 120.02869 * 359.97438 * 20 19 18 43 43 H 1.08003 * 119.97366 * 180.27401 * 21 20 19 44 44 H 1.09000 * 109.47344 * 239.98321 * 23 22 21 45 45 H 0.96692 * 113.99654 * 300.00214 * 24 23 22 46 46 H 1.48496 * 110.00102 * 179.97438 * 25 23 22 47 47 H 1.48503 * 109.99871 * 301.32064 * 25 23 22 48 48 H 1.08001 * 119.96792 * 179.97438 * 26 22 21 49 49 H 1.08000 * 120.02830 * 179.97438 * 27 26 22 50 50 H 1.09003 * 113.61087 * 334.57283 * 28 8 7 51 51 H 1.08999 * 113.61138 * 105.46788 * 28 8 7 52 52 H 1.08003 * 119.95359 * 180.02562 * 29 7 6 53 53 H 1.08000 * 120.01766 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1540 0.0063 6 6 4.0579 2.5199 -0.0053 7 6 3.3024 3.6777 -0.0112 8 6 3.9849 5.0212 -0.0170 9 1 5.0593 4.9508 0.1527 10 6 3.6077 5.8986 -1.2223 11 6 3.5838 7.0887 -0.2486 12 1 2.7670 7.7867 -0.4324 13 7 4.8803 7.7553 -0.1046 14 6 4.9352 9.0475 0.2746 15 8 3.9114 9.6583 0.4970 16 6 6.2690 9.7330 0.4232 17 6 7.1032 9.0026 1.4775 18 8 6.0656 11.0872 0.8317 19 6 7.0439 11.9785 0.5225 20 6 6.8607 13.3289 0.7821 21 6 7.8591 14.2322 0.4725 22 6 9.0352 13.7928 -0.1068 23 6 10.1199 14.7811 -0.4496 24 8 11.3119 14.4467 0.2642 25 14 9.5708 16.4962 0.0275 26 6 9.2178 12.4481 -0.3717 27 6 8.2248 11.5402 -0.0586 28 6 3.2891 6.0696 0.8671 29 6 1.9216 3.6053 -0.0120 30 6 1.2922 2.3751 -0.0063 31 1 -0.3634 0.5139 0.8899 32 1 -0.3633 0.5138 -0.8901 33 1 -0.3633 -1.0277 0.0005 34 1 5.1363 2.5792 -0.0053 35 1 4.3926 5.9665 -1.9756 36 1 2.6326 5.6608 -1.6474 37 1 5.6993 7.2667 -0.2822 38 1 6.7946 9.7163 -0.5316 39 1 8.0678 9.4988 1.5854 40 1 6.5777 9.0195 2.4322 41 1 7.2584 7.9696 1.1663 42 1 5.9402 13.6733 1.2299 43 1 7.7188 15.2831 0.6785 44 1 10.3165 14.7477 -1.5212 45 1 11.2104 14.4565 1.2257 46 1 10.6321 17.4802 -0.3049 47 1 8.3145 16.8436 -0.6841 48 1 10.1371 12.1074 -0.8246 49 1 8.3678 10.4900 -0.2661 50 1 2.2261 5.8795 1.0153 51 1 3.8172 6.2753 1.7982 52 1 1.3341 4.5115 -0.0170 53 1 0.2136 2.3200 -0.0066 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_10157680.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:28 Heat of formation + Delta-G solvation = -94.728679 kcal Electronic energy + Delta-G solvation = -36250.537325 eV Core-core repulsion = 31163.438991 eV Total energy + Delta-G solvation = -5087.098334 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 402.172 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -49.87309 -41.94847 -41.41973 -40.77682 -39.87524 -38.96112 -37.90895 -37.12746 -34.82913 -33.02926 -32.05752 -31.84254 -31.47268 -30.94925 -28.40465 -26.74826 -26.66355 -26.14818 -25.20974 -24.16843 -23.80534 -22.77262 -22.39440 -21.49739 -20.31587 -19.48721 -19.39911 -18.60798 -18.15528 -18.01349 -17.65146 -17.23234 -17.19524 -16.83541 -16.63935 -16.40800 -16.21554 -16.09594 -15.91918 -15.71460 -15.70960 -15.55965 -15.34044 -15.20018 -14.78800 -14.70903 -14.33720 -14.26781 -14.09085 -13.73076 -13.62098 -13.61679 -13.41435 -13.34954 -13.31348 -13.07298 -12.97626 -12.85852 -12.35796 -12.24967 -12.19691 -12.10898 -12.00399 -11.82051 -11.66962 -11.47410 -11.27201 -10.93361 -10.40902 -10.16000 -10.03951 -9.96441 -9.20937 -9.12404 -4.99216 0.08565 0.16899 0.25165 0.33125 1.34079 1.38209 1.50396 1.63791 1.96842 2.17823 2.46372 2.48543 2.66303 3.17406 3.43713 3.46956 3.57156 3.59325 3.66599 3.70692 3.73502 3.77616 3.84101 3.87639 3.93717 3.97179 4.04439 4.17125 4.22423 4.28265 4.32583 4.32683 4.36072 4.51801 4.53630 4.57283 4.62000 4.66047 4.68444 4.69448 4.80344 4.84072 4.89296 4.91044 5.00015 5.04101 5.07639 5.11431 5.16453 5.17490 5.19614 5.29604 5.43503 5.49048 5.62340 5.64402 5.68904 6.25036 6.26612 6.44901 6.80154 7.09698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.073 3.927 4 C 0.034 3.966 5 F -0.152 7.152 6 C -0.111 4.111 7 C -0.078 4.078 8 C -0.061 4.061 9 H 0.118 0.882 10 C -0.124 4.124 11 C 0.114 3.886 12 H 0.085 0.915 13 N -0.690 5.690 14 C 0.519 3.481 15 O -0.568 6.568 16 C 0.064 3.936 17 C -0.172 4.172 18 O -0.312 6.312 19 C 0.120 3.880 20 C -0.160 4.160 21 C -0.077 4.077 22 C -0.161 4.161 23 C -0.064 4.064 24 O -0.555 6.555 25 Si 0.767 3.233 26 C -0.057 4.057 27 C -0.207 4.207 28 C -0.142 4.142 29 C -0.082 4.082 30 C -0.179 4.179 31 H 0.070 0.930 32 H 0.071 0.929 33 H 0.114 0.886 34 H 0.157 0.843 35 H 0.090 0.910 36 H 0.104 0.896 37 H 0.420 0.580 38 H 0.125 0.875 39 H 0.085 0.915 40 H 0.061 0.939 41 H 0.110 0.890 42 H 0.135 0.865 43 H 0.147 0.853 44 H 0.107 0.893 45 H 0.395 0.605 46 H -0.299 1.299 47 H -0.289 1.289 48 H 0.139 0.861 49 H 0.155 0.845 50 H 0.100 0.900 51 H 0.071 0.929 52 H 0.156 0.844 53 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.456 -1.420 0.505 1.575 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.027 3.973 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.129 4.129 7 C -0.079 4.079 8 C -0.079 4.079 9 H 0.136 0.864 10 C -0.162 4.162 11 C 0.008 3.992 12 H 0.104 0.896 13 N -0.344 5.344 14 C 0.305 3.695 15 O -0.445 6.445 16 C 0.004 3.996 17 C -0.230 4.230 18 O -0.225 6.225 19 C 0.075 3.925 20 C -0.178 4.178 21 C -0.095 4.095 22 C -0.162 4.162 23 C -0.174 4.174 24 O -0.363 6.363 25 Si 0.674 3.326 26 C -0.075 4.075 27 C -0.226 4.226 28 C -0.180 4.180 29 C -0.100 4.100 30 C -0.197 4.197 31 H 0.088 0.912 32 H 0.089 0.911 33 H 0.132 0.868 34 H 0.175 0.825 35 H 0.109 0.891 36 H 0.122 0.878 37 H 0.258 0.742 38 H 0.142 0.858 39 H 0.103 0.897 40 H 0.080 0.920 41 H 0.128 0.872 42 H 0.153 0.847 43 H 0.164 0.836 44 H 0.125 0.875 45 H 0.245 0.755 46 H -0.228 1.228 47 H -0.216 1.216 48 H 0.157 0.843 49 H 0.172 0.828 50 H 0.118 0.882 51 H 0.090 0.910 52 H 0.173 0.827 53 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges -0.304 -0.454 -0.101 0.556 hybrid contribution 0.142 -1.055 -0.557 1.202 sum -0.163 -1.509 -0.658 1.654 Atomic orbital electron populations 1.23395 0.75812 1.05706 1.02708 1.86109 1.24020 1.26526 1.88820 1.19341 0.91059 0.86451 1.00418 1.17455 0.86579 0.83351 1.11161 1.91455 1.76813 1.50177 1.94641 1.21124 1.01919 0.89141 1.00722 1.19613 0.93320 0.94277 1.00654 1.21580 1.00496 0.88604 0.97193 0.86437 1.23412 1.04375 0.92291 0.96152 1.21925 0.85883 0.93596 0.97767 0.89631 1.45396 1.10047 1.10229 1.68740 1.20505 0.90378 0.82507 0.76091 1.90753 1.37459 1.65907 1.50423 1.22420 0.94100 0.80889 1.02162 1.22375 1.00154 1.02238 0.98183 1.86186 1.43095 1.18170 1.75056 1.19252 0.88010 0.89727 0.95495 1.20589 1.01423 0.90195 1.05609 1.20973 0.92255 0.99551 0.96693 1.20334 0.96440 0.95745 1.03633 1.24990 0.86498 1.06674 0.99250 1.86455 1.32369 1.92945 1.24554 0.93788 0.75768 0.72825 0.90250 1.20979 0.98407 0.91981 0.96146 1.21521 0.93673 1.01951 1.05409 1.23610 1.02289 0.94444 0.97669 1.21206 0.94272 0.97765 0.96778 1.21417 1.01408 0.90898 1.05995 0.91165 0.91072 0.86785 0.82532 0.89093 0.87758 0.74209 0.85783 0.89655 0.91987 0.87184 0.84708 0.83562 0.87520 0.75507 1.22758 1.21577 0.84342 0.82787 0.88173 0.91045 0.82669 0.82441 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.10 10.36 -93.14 -0.97 -3.07 16 3 C 0.07 0.34 6.69 22.53 0.15 0.49 16 4 C 0.03 0.20 7.31 22.45 0.16 0.37 16 5 F -0.15 -1.63 17.11 44.97 0.77 -0.86 16 6 C -0.11 0.05 9.68 22.30 0.22 0.27 16 7 C -0.08 0.32 5.29 -19.86 -0.11 0.21 16 8 C -0.06 0.52 3.85 -11.01 -0.04 0.48 16 9 H 0.12 -1.38 8.08 -2.39 -0.02 -1.40 16 10 C -0.12 1.13 7.29 31.12 0.23 1.35 16 11 C 0.11 -0.57 4.33 45.58 0.20 -0.37 16 12 H 0.09 0.02 7.47 -2.38 -0.02 0.00 16 13 N -0.69 4.16 5.15 -439.77 -2.27 1.89 16 14 C 0.52 0.99 7.23 87.66 0.63 1.62 16 15 O -0.57 -7.46 16.10 16.02 0.26 -7.21 16 16 C 0.06 -0.14 2.64 29.85 0.08 -0.07 16 17 C -0.17 1.28 9.07 71.98 0.65 1.93 16 18 O -0.31 -1.74 9.33 -73.47 -0.69 -2.42 16 19 C 0.12 0.37 6.60 22.50 0.15 0.52 16 20 C -0.16 -0.46 9.99 22.36 0.22 -0.24 16 21 C -0.08 0.01 8.66 22.25 0.19 0.20 16 22 C -0.16 0.05 5.39 -19.85 -0.11 -0.06 16 23 C -0.06 0.07 2.82 71.23 0.20 0.27 16 24 O -0.56 0.42 12.77 -148.98 -1.90 -1.48 16 25 Si 0.77 -1.39 29.78 68.60 2.04 0.65 16 26 C -0.06 0.05 9.60 22.25 0.21 0.26 16 27 C -0.21 0.28 8.24 22.36 0.18 0.46 16 28 C -0.14 0.89 7.27 31.18 0.23 1.12 16 29 C -0.08 0.35 8.53 22.26 0.19 0.54 16 30 C -0.18 0.26 9.04 22.36 0.20 0.47 16 31 H 0.07 -0.41 7.67 -2.39 -0.02 -0.43 16 32 H 0.07 -0.43 7.65 -2.39 -0.02 -0.45 16 33 H 0.11 -0.66 8.14 -2.39 -0.02 -0.68 16 34 H 0.16 -0.71 8.05 -2.91 -0.02 -0.73 16 35 H 0.09 -0.97 8.14 -2.38 -0.02 -0.99 16 36 H 0.10 -0.96 7.63 -2.39 -0.02 -0.98 16 37 H 0.42 -5.54 8.12 -92.70 -0.75 -6.30 16 38 H 0.12 -0.94 6.31 -2.38 -0.02 -0.95 16 39 H 0.08 -0.68 6.91 -2.39 -0.02 -0.70 16 40 H 0.06 -0.22 8.14 -2.39 -0.02 -0.24 16 41 H 0.11 -1.53 7.56 -2.39 -0.02 -1.55 16 42 H 0.14 0.32 8.06 -2.91 -0.02 0.30 16 43 H 0.15 -0.57 4.87 -2.91 -0.01 -0.59 16 44 H 0.11 -0.01 7.96 -2.39 -0.02 -0.03 16 45 H 0.39 -3.36 8.70 -74.06 -0.64 -4.01 16 46 H -0.30 -1.70 7.11 99.48 0.71 -0.99 16 47 H -0.29 -0.96 7.11 99.48 0.71 -0.25 16 48 H 0.14 -0.40 8.06 -2.91 -0.02 -0.42 16 49 H 0.15 -1.08 5.43 -2.91 -0.02 -1.10 16 50 H 0.10 -0.68 6.39 -2.39 -0.02 -0.70 16 51 H 0.07 -0.32 8.14 -2.39 -0.02 -0.34 16 52 H 0.16 -1.37 6.72 -2.91 -0.02 -1.39 16 53 H 0.16 -0.97 6.30 -2.91 -0.02 -0.99 16 Total: 0.00 -29.35 434.68 1.84 -27.51 By element: Atomic # 1 Polarization: -25.52 SS G_CDS: -0.37 Total: -25.90 kcal Atomic # 6 Polarization: 5.92 SS G_CDS: 4.96 Total: 10.88 kcal Atomic # 7 Polarization: 4.16 SS G_CDS: -2.27 Total: 1.89 kcal Atomic # 8 Polarization: -10.88 SS G_CDS: -3.29 Total: -14.18 kcal Atomic # 9 Polarization: -1.63 SS G_CDS: 0.77 Total: -0.86 kcal Atomic # 14 Polarization: -1.39 SS G_CDS: 2.04 Total: 0.65 kcal Total: -29.35 1.84 -27.51 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_10157680.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.219 kcal (2) G-P(sol) polarization free energy of solvation -29.347 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -96.566 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.838 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.729 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds