Wall clock time and date at job start Tue Mar 9 2021 12:56:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42902 * 1 3 3 C 1.35953 * 117.00120 * 2 1 4 4 C 1.38910 * 120.06465 * 179.97438 * 3 2 1 5 5 F 1.35092 * 120.04864 * 0.02562 * 4 3 2 6 6 C 1.38329 * 119.90338 * 179.97438 * 4 3 2 7 7 C 1.38263 * 120.03197 * 0.02690 * 6 4 3 8 8 C 1.50701 * 119.93690 * 179.97438 * 7 6 4 9 9 H 1.09002 * 112.85178 * 9.66397 * 8 7 6 10 10 C 1.53785 * 113.69000 * 140.93555 * 8 7 6 11 11 C 1.53779 * 87.08093 * 139.98979 * 10 8 7 12 12 H 1.08994 * 113.61314 * 220.01752 * 11 10 8 13 13 N 1.46502 * 113.69134 * 89.12362 * 11 10 8 14 14 C 1.34780 * 119.99583 * 107.46310 * 13 11 10 15 15 O 1.21685 * 120.00184 * 0.02562 * 14 13 11 16 16 C 1.46678 * 119.99600 * 180.02562 * 14 13 11 17 17 C 1.37876 * 126.23034 * 179.97438 * 16 14 13 18 18 C 1.39832 * 107.08187 * 180.02562 * 17 16 14 19 19 C 1.50709 * 126.06351 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47231 * 65.00228 * 19 18 17 21 21 Si 1.86302 * 109.46803 * 184.99601 * 19 18 17 22 22 C 1.35451 * 107.86865 * 359.97438 * 18 17 16 23 23 N 1.35526 * 108.87012 * 359.73983 * 22 18 17 24 24 C 1.53781 * 113.61206 * 238.47091 * 8 7 6 25 25 C 1.38262 * 120.12604 * 0.22772 * 7 6 4 26 26 C 1.38179 * 120.09077 * 359.49297 * 25 7 6 27 27 H 1.09000 * 109.46622 * 179.97438 * 1 2 3 28 28 H 1.08995 * 109.47192 * 299.99824 * 1 2 3 29 29 H 1.08992 * 109.46805 * 60.00244 * 1 2 3 30 30 H 1.07997 * 119.98712 * 179.97438 * 6 4 3 31 31 H 1.09003 * 113.60734 * 254.54099 * 10 8 7 32 32 H 1.08996 * 113.61146 * 25.43597 * 10 8 7 33 33 H 0.96999 * 120.00301 * 287.47041 * 13 11 10 34 34 H 1.07997 * 126.45891 * 0.04031 * 17 16 14 35 35 H 1.08996 * 109.47540 * 304.99470 * 19 18 17 36 36 H 0.96700 * 114.00560 * 59.99657 * 20 19 18 37 37 H 1.48508 * 109.99861 * 58.68318 * 21 19 18 38 38 H 1.48501 * 109.99777 * 179.97438 * 21 19 18 39 39 H 1.08005 * 125.56183 * 179.97438 * 22 18 17 40 40 H 0.97005 * 125.68123 * 180.30313 * 23 22 18 41 41 H 1.09005 * 113.61302 * 334.48043 * 24 8 7 42 42 H 1.08993 * 113.62030 * 105.38889 * 24 8 7 43 43 H 1.07992 * 119.95241 * 179.72701 * 25 7 6 44 44 H 1.08005 * 120.01404 * 180.22890 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 3.4334 1.2856 0.0005 5 9 4.1714 0.1540 0.0005 6 6 4.0579 2.5198 0.0000 7 6 3.3023 3.6777 -0.0005 8 6 3.9850 5.0213 -0.0005 9 1 5.0596 4.9501 -0.1687 10 6 3.2904 6.0672 -0.8885 11 6 3.5857 7.0902 0.2212 12 1 2.7686 7.7892 0.3993 13 7 4.8829 7.7559 0.0781 14 6 4.9392 9.0463 -0.3068 15 8 3.9126 9.6586 -0.5349 16 6 6.2379 9.7127 -0.4506 17 6 6.4446 11.0206 -0.8347 18 6 7.8266 11.2338 -0.8394 19 6 8.5246 12.5208 -1.1967 20 8 8.1908 13.5259 -0.2373 21 14 10.3676 12.2488 -1.1953 22 6 8.4266 10.0783 -0.4658 23 7 7.4721 9.1480 -0.2208 24 6 3.6066 5.9044 1.2002 25 6 1.9216 3.6053 0.0043 26 6 1.2923 2.3751 -0.0010 27 1 -0.3632 -1.0277 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 5.1363 2.5791 0.0008 31 1 3.8188 6.2689 -1.8202 32 1 2.2272 5.8778 -1.0361 33 1 5.7012 7.2679 0.2602 34 1 5.6828 11.7441 -1.0847 35 1 8.2058 12.8441 -2.1875 36 1 8.4460 13.3050 0.6689 37 1 10.7244 11.1832 -2.1662 38 1 11.0674 13.5105 -1.5468 39 1 9.4918 9.9247 -0.3741 40 1 7.6319 8.2353 0.0664 41 1 2.6298 5.6705 1.6236 42 1 4.3901 5.9749 1.9546 43 1 1.3342 4.5115 0.0083 44 1 0.2137 2.3200 -0.0010 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_10543058.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:32 Heat of formation + Delta-G solvation = -46.536698 kcal Electronic energy + Delta-G solvation = -28882.957810 eV Core-core repulsion = 24490.506897 eV Total energy + Delta-G solvation = -4392.450913 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.137 amu Computer time = 0.84 seconds Orbital eigenvalues (eV) -49.88687 -42.49521 -41.55171 -40.70851 -39.54768 -37.94150 -37.62265 -34.62966 -32.51331 -31.86288 -31.34699 -30.53567 -28.42058 -26.72833 -26.68997 -25.82452 -24.32614 -23.72952 -22.59125 -21.29694 -20.80941 -20.41468 -19.84040 -19.40373 -18.09122 -17.67413 -17.49173 -17.21160 -17.20373 -16.71844 -16.50825 -16.18839 -16.10514 -15.86260 -15.73219 -15.64003 -15.30229 -15.12748 -14.75419 -14.58610 -14.39537 -14.04367 -13.92939 -13.74265 -13.64184 -13.46301 -13.40147 -13.09606 -12.98626 -12.37554 -12.25924 -12.22224 -11.96454 -11.85912 -11.49912 -11.34384 -11.28555 -10.32212 -10.24922 -9.97889 -9.94113 -9.27760 -9.13479 -4.92610 0.07283 0.15358 0.36417 1.42857 1.53696 1.74712 1.91682 2.10578 2.15182 2.16946 2.25138 2.45027 3.16018 3.44003 3.57232 3.66841 3.70858 3.76152 3.81294 3.94273 4.00103 4.02536 4.14459 4.19181 4.20770 4.31719 4.32333 4.38125 4.50324 4.60986 4.66659 4.68136 4.77792 4.80704 4.85644 4.89170 4.92180 5.01475 5.03809 5.05873 5.13680 5.15838 5.40814 5.58339 5.61386 5.62911 5.74304 6.24106 6.36037 6.54027 6.92230 7.06459 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.111 4.111 7 C -0.079 4.079 8 C -0.060 4.060 9 H 0.115 0.885 10 C -0.143 4.143 11 C 0.113 3.887 12 H 0.088 0.912 13 N -0.697 5.697 14 C 0.591 3.409 15 O -0.575 6.575 16 C -0.069 4.069 17 C -0.106 4.106 18 C -0.229 4.229 19 C -0.053 4.053 20 O -0.566 6.566 21 Si 0.803 3.197 22 C 0.062 3.938 23 N -0.514 5.514 24 C -0.123 4.123 25 C -0.082 4.082 26 C -0.178 4.178 27 H 0.114 0.886 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.157 0.843 31 H 0.066 0.934 32 H 0.102 0.898 33 H 0.412 0.588 34 H 0.122 0.878 35 H 0.090 0.910 36 H 0.394 0.606 37 H -0.275 1.275 38 H -0.311 1.311 39 H 0.218 0.782 40 H 0.438 0.562 41 H 0.106 0.894 42 H 0.091 0.909 43 H 0.156 0.844 44 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.090 -3.379 4.405 6.354 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.129 4.129 7 C -0.079 4.079 8 C -0.078 4.078 9 H 0.133 0.867 10 C -0.181 4.181 11 C 0.008 3.992 12 H 0.107 0.893 13 N -0.348 5.348 14 C 0.380 3.620 15 O -0.454 6.454 16 C -0.182 4.182 17 C -0.133 4.133 18 C -0.236 4.236 19 C -0.162 4.162 20 O -0.374 6.374 21 Si 0.708 3.292 22 C -0.076 4.076 23 N -0.111 5.111 24 C -0.161 4.161 25 C -0.100 4.100 26 C -0.197 4.197 27 H 0.133 0.867 28 H 0.090 0.910 29 H 0.088 0.912 30 H 0.174 0.826 31 H 0.085 0.915 32 H 0.120 0.880 33 H 0.249 0.751 34 H 0.140 0.860 35 H 0.108 0.892 36 H 0.243 0.757 37 H -0.201 1.201 38 H -0.239 1.239 39 H 0.234 0.766 40 H 0.279 0.721 41 H 0.124 0.876 42 H 0.109 0.891 43 H 0.173 0.827 44 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 2.900 -3.100 3.328 5.395 hybrid contribution -0.606 -0.654 -0.488 1.016 sum 2.294 -3.754 2.841 5.237 Atomic orbital electron populations 1.23399 0.75792 1.05735 1.02711 1.86109 1.24031 1.26489 1.88794 1.19340 0.91053 0.86464 1.00350 1.17440 0.86580 0.83327 1.11147 1.91453 1.76804 1.50163 1.94638 1.21117 1.01898 0.89154 1.00781 1.19597 0.93354 0.94202 1.00764 1.21563 1.00338 0.88690 0.97241 0.86679 1.23592 1.02371 0.94585 0.97582 1.21906 0.85805 0.93745 0.97768 0.89349 1.45367 1.09811 1.10660 1.68924 1.17227 0.87003 0.81711 0.76045 1.90850 1.35823 1.66185 1.52563 1.20095 0.85097 0.95226 1.17829 1.21226 0.96606 0.94021 1.01450 1.19951 0.93441 0.97247 1.12940 1.24733 1.11786 0.86013 0.93642 1.86457 1.85923 1.43533 1.21491 0.93958 0.70727 0.77351 0.87181 1.22389 0.95879 0.87734 1.01627 1.41850 1.04054 1.13971 1.51275 1.23415 1.04472 0.92130 0.96052 1.21202 0.94240 0.97806 0.96750 1.21423 1.01441 0.90877 1.05956 0.86747 0.91043 0.91193 0.82551 0.91471 0.87984 0.75090 0.86015 0.89241 0.75678 1.20137 1.23947 0.76618 0.72066 0.87570 0.89075 0.82651 0.82389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.05 10.36 -93.02 -0.96 -3.01 16 3 C 0.07 0.34 6.69 22.53 0.15 0.49 16 4 C 0.03 0.20 7.31 22.45 0.16 0.37 16 5 F -0.15 -1.60 17.11 44.97 0.77 -0.83 16 6 C -0.11 0.05 9.68 22.30 0.22 0.27 16 7 C -0.08 0.31 5.29 -19.85 -0.11 0.21 16 8 C -0.06 0.49 3.86 -11.01 -0.04 0.45 16 9 H 0.12 -1.30 8.08 -2.39 -0.02 -1.32 16 10 C -0.14 0.78 7.26 31.12 0.23 1.00 16 11 C 0.11 -0.48 4.32 45.52 0.20 -0.28 16 12 H 0.09 0.06 7.46 -2.39 -0.02 0.05 16 13 N -0.70 3.16 5.26 -444.00 -2.34 0.82 16 14 C 0.59 2.49 7.79 86.45 0.67 3.17 16 15 O -0.57 -8.20 16.48 -4.30 -0.07 -8.28 16 16 C -0.07 -0.10 7.06 40.35 0.28 0.19 16 17 C -0.11 -0.61 10.59 22.57 0.24 -0.37 16 18 C -0.23 0.04 5.43 -20.12 -0.11 -0.07 16 19 C -0.05 -0.02 3.02 71.24 0.22 0.20 16 20 O -0.57 -1.42 12.88 -148.98 -1.92 -3.34 16 21 Si 0.80 -3.93 30.60 68.60 2.10 -1.83 16 22 C 0.06 -0.47 10.45 83.48 0.87 0.40 16 23 N -0.51 4.12 5.99 -183.62 -1.10 3.02 16 24 C -0.12 1.09 7.29 31.12 0.23 1.31 16 25 C -0.08 0.34 8.52 22.26 0.19 0.53 16 26 C -0.18 0.27 9.04 22.36 0.20 0.47 16 27 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 28 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 29 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 30 H 0.16 -0.72 8.05 -2.91 -0.02 -0.75 16 31 H 0.07 -0.20 8.14 -2.39 -0.02 -0.22 16 32 H 0.10 -0.64 6.41 -2.39 -0.02 -0.66 16 33 H 0.41 -4.92 7.83 -92.71 -0.73 -5.64 16 34 H 0.12 1.27 8.06 -2.91 -0.02 1.24 16 35 H 0.09 0.32 7.96 -2.39 -0.02 0.30 16 36 H 0.39 -2.54 8.70 -74.06 -0.64 -3.18 16 37 H -0.27 0.51 7.11 99.48 0.71 1.21 16 38 H -0.31 -1.36 7.11 99.48 0.71 -0.65 16 39 H 0.22 -3.46 6.21 -2.91 -0.02 -3.47 16 40 H 0.44 -7.06 8.19 -92.70 -0.76 -7.82 16 41 H 0.11 -0.98 7.61 -2.38 -0.02 -1.00 16 42 H 0.09 -0.98 8.14 -2.39 -0.02 -1.00 16 43 H 0.16 -1.36 6.72 -2.91 -0.02 -1.38 16 44 H 0.16 -0.98 6.30 -2.91 -0.02 -1.00 16 Total: 0.00 -31.12 373.64 0.19 -30.93 By element: Atomic # 1 Polarization: -25.86 SS G_CDS: -1.00 Total: -26.87 kcal Atomic # 6 Polarization: 4.68 SS G_CDS: 4.71 Total: 9.39 kcal Atomic # 7 Polarization: 7.28 SS G_CDS: -3.44 Total: 3.84 kcal Atomic # 8 Polarization: -11.68 SS G_CDS: -2.95 Total: -14.63 kcal Atomic # 9 Polarization: -1.60 SS G_CDS: 0.77 Total: -0.83 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.10 Total: -1.83 kcal Total: -31.12 0.19 -30.93 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_10543058.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.606 kcal (2) G-P(sol) polarization free energy of solvation -31.118 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -46.724 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.187 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.931 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.537 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.84 seconds