Wall clock time and date at job start Tue Mar 9 2021 12:56:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35958 * 116.99971 * 2 1 4 4 C 1.38902 * 120.06250 * 180.02562 * 3 2 1 5 5 F 1.35102 * 120.05056 * 0.03854 * 4 3 2 6 6 C 1.38332 * 119.90750 * 180.02562 * 4 3 2 7 7 C 1.38258 * 120.02554 * 359.97438 * 6 4 3 8 8 C 1.50704 * 119.93429 * 180.02562 * 7 6 4 9 9 H 1.08995 * 112.85282 * 11.19787 * 8 7 6 10 10 C 1.53781 * 113.68987 * 142.46758 * 8 7 6 11 11 C 1.53778 * 87.08228 * 139.98773 * 10 8 7 12 12 H 1.09000 * 113.69110 * 220.00139 * 11 10 8 13 13 N 1.46510 * 113.61331 * 89.11435 * 11 10 8 14 14 C 1.34775 * 119.99924 * 107.50330 * 13 11 10 15 15 O 1.21696 * 120.00131 * 359.97438 * 14 13 11 16 16 C 1.46675 * 119.99961 * 180.02562 * 14 13 11 17 17 C 1.37872 * 126.23548 * 179.97438 * 16 14 13 18 18 C 1.50706 * 126.45521 * 359.97438 * 17 16 14 19 19 C 1.39833 * 107.08529 * 180.23932 * 17 16 14 20 20 C 1.50705 * 126.06273 * 179.74151 * 19 17 16 21 21 O 1.42900 * 109.47352 * 51.11449 * 20 19 17 22 22 Si 1.86301 * 109.47064 * 291.11005 * 20 19 17 23 23 C 1.35451 * 107.86406 * 359.57021 * 19 17 16 24 24 C 1.50704 * 125.56257 * 180.19918 * 23 19 17 25 25 N 1.35528 * 108.87273 * 0.43364 * 23 19 17 26 26 C 1.53778 * 87.07999 * 334.56645 * 11 10 8 27 27 C 1.38256 * 120.12879 * 0.27603 * 7 6 4 28 28 C 1.38185 * 120.09619 * 359.45648 * 27 7 6 29 29 H 1.09002 * 109.46817 * 60.00575 * 1 2 3 30 30 H 1.08996 * 109.47100 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.47425 * 300.00197 * 1 2 3 32 32 H 1.08000 * 119.99098 * 179.97438 * 6 4 3 33 33 H 1.08998 * 113.61859 * 25.44070 * 10 8 7 34 34 H 1.09005 * 113.61229 * 254.53828 * 10 8 7 35 35 H 0.97003 * 119.99733 * 287.50229 * 13 11 10 36 36 H 1.08998 * 109.46997 * 90.02218 * 18 17 16 37 37 H 1.08996 * 109.46833 * 330.02546 * 18 17 16 38 38 H 1.09003 * 109.46852 * 210.02371 * 18 17 16 39 39 H 1.09005 * 109.46890 * 171.11386 * 20 19 17 40 40 H 0.96699 * 113.99787 * 180.02562 * 21 20 19 41 41 H 1.48502 * 110.00023 * 305.79200 * 22 20 19 42 42 H 1.48495 * 109.99986 * 67.11274 * 22 20 19 43 43 H 1.09004 * 109.46868 * 275.52868 * 24 23 19 44 44 H 1.09004 * 109.46773 * 35.52941 * 24 23 19 45 45 H 1.08995 * 109.47334 * 155.52822 * 24 23 19 46 46 H 0.97003 * 125.68010 * 179.74270 * 25 23 19 47 47 H 1.09005 * 113.61186 * 139.98165 * 26 11 10 48 48 H 1.08995 * 113.61391 * 270.79671 * 26 11 10 49 49 H 1.08002 * 119.95375 * 179.70317 * 27 7 6 50 50 H 1.07999 * 120.01930 * 180.27561 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0018 6 6 4.0579 2.5199 0.0000 7 6 3.3023 3.6777 0.0005 8 6 3.9850 5.0212 0.0005 9 1 5.0550 4.9523 -0.1950 10 6 3.2690 6.0781 -0.8569 11 6 3.5916 7.0871 0.2578 12 1 2.7801 7.7846 0.4656 13 7 4.8854 7.7536 0.0896 14 6 4.9332 9.0487 -0.2804 15 8 3.9018 9.6644 -0.4752 16 6 6.2285 9.7158 -0.4493 17 6 6.4268 11.0282 -0.8222 18 6 5.3562 12.0426 -1.1322 19 6 7.8085 11.2390 -0.8646 20 6 8.4985 12.5280 -1.2302 21 8 7.9510 13.5975 -0.4566 22 14 8.2420 12.8775 -3.0421 23 6 8.4165 10.0802 -0.5151 24 6 9.9053 9.8637 -0.4259 25 7 7.4677 9.1457 -0.2638 26 6 3.6363 5.8893 1.2211 27 6 1.9217 3.6053 0.0063 28 6 1.2922 2.3751 0.0002 29 1 -0.3633 0.5138 -0.8901 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3634 0.5139 0.8900 32 1 5.1363 2.5791 0.0000 33 1 2.2024 5.8905 -0.9806 34 1 3.7743 6.2916 -1.7988 35 1 5.7076 7.2628 0.2446 36 1 5.0809 12.5707 -0.2193 37 1 4.4806 11.5347 -1.5362 38 1 5.7330 12.7560 -1.8652 39 1 9.5654 12.4400 -1.0246 40 1 8.3487 14.4595 -0.6403 41 1 8.6801 11.7118 -3.8511 42 1 6.8100 13.1691 -3.3053 43 1 10.2966 9.6184 -1.4132 44 1 10.3833 10.7729 -0.0611 45 1 10.1126 9.0434 0.2612 46 1 7.6340 8.2279 0.0026 47 1 4.4383 5.9504 1.9568 48 1 2.6705 5.6509 1.6666 49 1 1.3342 4.5116 0.0115 50 1 0.2136 2.3201 0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_12297754.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:46 Heat of formation + Delta-G solvation = -54.648187 kcal Electronic energy + Delta-G solvation = -33483.345345 eV Core-core repulsion = 28779.467453 eV Total energy + Delta-G solvation = -4703.877892 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.168 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -49.91777 -42.78766 -41.62606 -40.76969 -39.61303 -37.98795 -37.60573 -34.82974 -33.85765 -32.98505 -31.89491 -31.23587 -29.31866 -28.52721 -27.65739 -26.75303 -26.59501 -25.57565 -23.93038 -22.99841 -22.49791 -20.89559 -20.50320 -19.92474 -19.52409 -19.33989 -18.20071 -18.09398 -17.68151 -17.23417 -17.13357 -16.97199 -16.50342 -16.29635 -16.13285 -15.99571 -15.75867 -15.33618 -15.26484 -15.18815 -15.08652 -14.68868 -14.42749 -14.23813 -14.09936 -13.96587 -13.76135 -13.67292 -13.64710 -13.45423 -13.27135 -13.23333 -13.11558 -13.02018 -12.68350 -12.44980 -12.40028 -12.26048 -11.90209 -11.79242 -11.54754 -11.35211 -11.15873 -10.54605 -10.29677 -10.01523 -9.58883 -9.17612 -9.09536 -4.92561 0.03660 0.11601 0.23425 1.15731 1.58017 1.72564 1.82121 2.00512 2.09374 2.14001 2.18118 2.41257 3.12248 3.38089 3.52716 3.56409 3.61234 3.71005 3.72593 3.80609 3.88551 3.97618 3.98812 4.09325 4.16507 4.17249 4.29067 4.30355 4.33685 4.43511 4.46607 4.51031 4.55942 4.65554 4.69621 4.71631 4.73149 4.75467 4.80097 4.85272 4.88738 4.95503 4.97834 5.01479 5.07547 5.09938 5.12066 5.18470 5.36782 5.53721 5.57807 5.59026 5.73538 6.21150 6.26883 6.43394 6.99782 7.05612 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.339 6.339 3 C 0.075 3.925 4 C 0.035 3.965 5 F -0.151 7.151 6 C -0.112 4.112 7 C -0.079 4.079 8 C -0.060 4.060 9 H 0.112 0.888 10 C -0.142 4.142 11 C 0.114 3.886 12 H 0.090 0.910 13 N -0.699 5.699 14 C 0.592 3.408 15 O -0.564 6.564 16 C -0.083 4.083 17 C -0.076 4.076 18 C -0.087 4.087 19 C -0.202 4.202 20 C -0.025 4.025 21 O -0.564 6.564 22 Si 0.749 3.251 23 C 0.092 3.908 24 C -0.097 4.097 25 N -0.518 5.518 26 C -0.123 4.123 27 C -0.082 4.082 28 C -0.178 4.178 29 H 0.070 0.930 30 H 0.115 0.885 31 H 0.071 0.929 32 H 0.155 0.845 33 H 0.104 0.896 34 H 0.065 0.935 35 H 0.409 0.591 36 H 0.065 0.935 37 H 0.059 0.941 38 H 0.064 0.936 39 H 0.101 0.899 40 H 0.400 0.600 41 H -0.304 1.304 42 H -0.301 1.301 43 H 0.093 0.907 44 H 0.100 0.900 45 H 0.092 0.908 46 H 0.434 0.566 47 H 0.088 0.912 48 H 0.108 0.892 49 H 0.156 0.844 50 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.110 0.853 1.342 5.352 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.254 6.254 3 C 0.029 3.971 4 C 0.016 3.984 5 F -0.130 7.130 6 C -0.130 4.130 7 C -0.080 4.080 8 C -0.078 4.078 9 H 0.130 0.870 10 C -0.180 4.180 11 C 0.008 3.992 12 H 0.108 0.892 13 N -0.350 5.350 14 C 0.381 3.619 15 O -0.443 6.443 16 C -0.194 4.194 17 C -0.085 4.085 18 C -0.144 4.144 19 C -0.208 4.208 20 C -0.135 4.135 21 O -0.373 6.373 22 Si 0.657 3.343 23 C -0.028 4.028 24 C -0.154 4.154 25 N -0.117 5.117 26 C -0.161 4.161 27 C -0.100 4.100 28 C -0.196 4.196 29 H 0.088 0.912 30 H 0.133 0.867 31 H 0.090 0.910 32 H 0.173 0.827 33 H 0.123 0.877 34 H 0.084 0.916 35 H 0.246 0.754 36 H 0.084 0.916 37 H 0.078 0.922 38 H 0.082 0.918 39 H 0.119 0.881 40 H 0.250 0.750 41 H -0.232 1.232 42 H -0.230 1.230 43 H 0.111 0.889 44 H 0.119 0.881 45 H 0.110 0.890 46 H 0.275 0.725 47 H 0.106 0.894 48 H 0.126 0.874 49 H 0.174 0.826 50 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 3.676 0.128 0.778 3.760 hybrid contribution -0.247 -1.474 0.347 1.534 sum 3.429 -1.346 1.126 3.852 Atomic orbital electron populations 1.23408 0.75752 1.05778 1.02724 1.86111 1.24065 1.26419 1.88768 1.19327 0.91007 0.86492 1.00264 1.17421 0.86610 0.83275 1.11120 1.91456 1.76806 1.50121 1.94635 1.21100 1.01838 0.89222 1.00864 1.19569 0.93413 0.94082 1.00893 1.21539 1.00174 0.88853 0.97258 0.86988 1.23591 1.02332 0.94535 0.97566 1.21922 0.85707 0.93757 0.97771 0.89163 1.45381 1.09755 1.10180 1.69683 1.17095 0.86795 0.81793 0.76237 1.90816 1.34930 1.65911 1.52603 1.19954 0.85055 0.94780 1.19644 1.20018 0.95092 0.92864 1.00540 1.20349 0.96022 0.96520 1.01485 1.18899 0.92413 0.96299 1.13208 1.23927 0.99119 0.85073 1.05415 1.86487 1.65865 1.19577 1.65379 0.96029 0.80333 0.84981 0.72987 1.20827 0.93344 0.88081 1.00588 1.20710 0.84635 1.05410 1.04614 1.41732 1.03917 1.13068 1.53001 1.23410 1.04525 0.92161 0.95964 1.21204 0.94156 0.97876 0.96744 1.21427 1.01478 0.90814 1.05880 0.91166 0.86689 0.91041 0.82702 0.87725 0.91636 0.75415 0.91598 0.92227 0.91782 0.88108 0.74986 1.23195 1.22952 0.88855 0.88096 0.88957 0.72474 0.89365 0.87378 0.82628 0.82271 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.23 10.36 -93.08 -0.96 -3.19 16 3 C 0.08 0.40 6.69 22.53 0.15 0.55 16 4 C 0.04 0.24 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.72 17.11 44.97 0.77 -0.95 16 6 C -0.11 -0.09 9.68 22.30 0.22 0.13 16 7 C -0.08 0.20 5.29 -19.85 -0.11 0.10 16 8 C -0.06 0.38 3.85 -11.01 -0.04 0.34 16 9 H 0.11 -1.00 8.09 -2.39 -0.02 -1.02 16 10 C -0.14 0.52 7.25 31.12 0.23 0.75 16 11 C 0.11 -0.24 4.32 45.51 0.20 -0.04 16 12 H 0.09 0.22 7.46 -2.39 -0.02 0.20 16 13 N -0.70 0.90 5.26 -443.99 -2.33 -1.44 16 14 C 0.59 4.54 7.79 86.45 0.67 5.21 16 15 O -0.56 -8.97 14.40 -4.34 -0.06 -9.03 16 16 C -0.08 -0.56 7.06 40.35 0.28 -0.27 16 17 C -0.08 -0.81 5.88 -19.56 -0.12 -0.93 16 18 C -0.09 -1.14 9.14 71.24 0.65 -0.49 16 19 C -0.20 -1.09 4.43 -20.12 -0.09 -1.18 16 20 C -0.02 0.00 2.78 71.24 0.20 0.19 16 21 O -0.56 -0.78 12.35 -148.98 -1.84 -2.62 16 22 Si 0.75 0.74 31.48 68.60 2.16 2.90 16 23 C 0.09 -0.04 7.13 41.35 0.29 0.26 16 24 C -0.10 0.84 10.00 71.24 0.71 1.55 16 25 N -0.52 0.81 5.99 -171.93 -1.03 -0.22 16 26 C -0.12 0.84 7.29 31.12 0.23 1.06 16 27 C -0.08 0.26 8.59 22.26 0.19 0.45 16 28 C -0.18 0.13 9.04 22.36 0.20 0.34 16 29 H 0.07 -0.39 7.66 -2.39 -0.02 -0.40 16 30 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 31 H 0.07 -0.41 7.66 -2.38 -0.02 -0.43 16 32 H 0.16 -0.48 8.05 -2.91 -0.02 -0.51 16 33 H 0.10 -0.53 6.33 -2.39 -0.02 -0.54 16 34 H 0.06 -0.07 8.14 -2.38 -0.02 -0.08 16 35 H 0.41 -3.27 7.83 -92.71 -0.73 -4.00 16 36 H 0.07 0.89 8.14 -2.39 -0.02 0.87 16 37 H 0.06 0.95 6.48 -2.39 -0.02 0.94 16 38 H 0.06 0.81 5.01 -2.39 -0.01 0.80 16 39 H 0.10 -0.65 6.66 -2.38 -0.02 -0.67 16 40 H 0.40 -3.68 8.74 -74.06 -0.65 -4.32 16 41 H -0.30 -2.26 7.11 99.48 0.71 -1.55 16 42 H -0.30 -2.96 5.77 99.48 0.57 -2.39 16 43 H 0.09 -0.94 8.14 -2.38 -0.02 -0.96 16 44 H 0.10 -1.02 7.23 -2.38 -0.02 -1.04 16 45 H 0.09 -1.13 8.14 -2.39 -0.02 -1.15 16 46 H 0.43 -4.21 8.19 -92.71 -0.76 -4.97 16 47 H 0.09 -0.73 8.14 -2.38 -0.02 -0.75 16 48 H 0.11 -0.82 7.72 -2.39 -0.02 -0.84 16 49 H 0.16 -1.20 6.67 -2.91 -0.02 -1.22 16 50 H 0.16 -0.90 6.30 -2.91 -0.02 -0.91 16 Total: 0.00 -31.32 408.12 0.65 -30.67 By element: Atomic # 1 Polarization: -24.41 SS G_CDS: -1.20 Total: -25.60 kcal Atomic # 6 Polarization: 4.34 SS G_CDS: 5.15 Total: 9.48 kcal Atomic # 7 Polarization: 1.71 SS G_CDS: -3.37 Total: -1.66 kcal Atomic # 8 Polarization: -11.98 SS G_CDS: -2.87 Total: -14.85 kcal Atomic # 9 Polarization: -1.72 SS G_CDS: 0.77 Total: -0.95 kcal Atomic # 14 Polarization: 0.74 SS G_CDS: 2.16 Total: 2.90 kcal Total: -31.32 0.65 -30.67 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_12297754.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.979 kcal (2) G-P(sol) polarization free energy of solvation -31.318 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -55.298 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.649 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.669 kcal (6) G-S(sol) free energy of system = (1) + (5) -54.648 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds