Wall clock time and date at job start Tue Mar 9 2021 12:56:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35717 * 116.99705 * 2 1 4 4 C 1.38692 * 119.86247 * 359.97438 * 3 2 1 5 5 C 1.38449 * 120.02906 * 179.71849 * 4 3 2 6 6 O 1.35651 * 120.11791 * 180.27521 * 5 4 3 7 7 C 1.42895 * 117.00120 * 0.30422 * 6 5 4 8 8 C 1.40302 * 119.75747 * 0.58085 * 5 4 3 9 9 C 1.47299 * 120.12996 * 179.72232 * 8 5 4 10 10 O 1.21615 * 120.00124 * 359.71761 * 9 8 5 11 11 N 1.34778 * 119.99714 * 179.72198 * 9 8 5 12 12 C 1.46500 * 119.99919 * 180.02562 * 11 9 8 13 13 H 1.09002 * 112.85132 * 25.33083 * 12 11 9 14 14 C 1.53781 * 113.61711 * 156.52821 * 12 11 9 15 15 C 1.53785 * 87.08277 * 89.19510 * 14 12 11 16 16 H 1.08995 * 113.61449 * 270.88726 * 15 14 12 17 17 C 1.50693 * 113.61331 * 140.06613 * 15 14 12 18 18 C 1.38258 * 119.93721 * 120.00369 * 17 15 14 19 19 C 1.38337 * 120.02942 * 179.97438 * 18 17 15 20 20 F 1.35099 * 120.04581 * 179.97438 * 19 18 17 21 21 C 1.38909 * 119.90100 * 0.02562 * 19 18 17 22 22 O 1.35958 * 120.05792 * 179.97438 * 21 19 18 23 23 C 1.42899 * 117.00059 * 179.97438 * 22 21 19 24 24 C 1.38657 * 119.88172 * 359.97438 * 21 19 18 25 25 C 1.38183 * 119.96436 * 359.72574 * 24 21 19 26 26 C 1.53776 * 87.07661 * 25.43397 * 15 14 12 27 27 C 1.39851 * 119.72946 * 359.43996 * 8 5 4 28 28 C 1.37544 * 119.96778 * 0.25919 * 27 8 5 29 29 C 1.50698 * 119.87956 * 179.97438 * 28 27 8 30 30 O 1.42900 * 109.46901 * 105.00261 * 29 28 27 31 31 Si 1.86298 * 109.47488 * 345.00351 * 29 28 27 32 32 H 1.08994 * 109.47346 * 300.00134 * 1 2 3 33 33 H 1.08997 * 109.47028 * 60.00308 * 1 2 3 34 34 H 1.09000 * 109.46536 * 180.02562 * 1 2 3 35 35 H 1.07995 * 119.98453 * 0.02562 * 4 3 2 36 36 H 1.09001 * 109.47360 * 59.99680 * 7 6 5 37 37 H 1.09007 * 109.47452 * 179.97438 * 7 6 5 38 38 H 1.08999 * 109.47326 * 299.99638 * 7 6 5 39 39 H 0.96998 * 120.00229 * 359.97438 * 11 9 8 40 40 H 1.08993 * 113.62030 * 203.74957 * 14 12 11 41 41 H 1.09006 * 113.61033 * 334.65409 * 14 12 11 42 42 H 1.07996 * 119.98402 * 359.97210 * 18 17 15 43 43 H 1.09004 * 109.46828 * 59.99731 * 23 22 21 44 44 H 1.09005 * 109.47037 * 179.97438 * 23 22 21 45 45 H 1.08996 * 109.46982 * 299.99992 * 23 22 21 46 46 H 1.07992 * 120.01901 * 180.02562 * 24 21 19 47 47 H 1.08002 * 119.95093 * 180.29537 * 25 24 21 48 48 H 1.09003 * 113.61687 * 220.01420 * 26 15 14 49 49 H 1.09009 * 113.61565 * 89.11769 * 26 15 14 50 50 H 1.08006 * 120.01629 * 180.27300 * 27 8 5 51 51 H 1.09001 * 109.47449 * 224.99779 * 29 28 27 52 52 H 0.96699 * 114.00340 * 59.99582 * 30 29 28 53 53 H 1.48497 * 110.00131 * 178.68126 * 31 29 28 54 54 H 1.48500 * 109.99475 * 299.99807 * 31 29 28 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0451 1.2093 0.0000 4 6 1.2869 2.3706 -0.0005 5 6 1.9117 3.6060 0.0053 6 8 1.1719 4.7430 0.0105 7 6 -0.2491 4.5924 0.0162 8 6 3.3129 3.6777 -0.0005 9 6 3.9862 4.9878 -0.0005 10 8 3.3275 6.0101 -0.0006 11 7 5.3324 5.0536 -0.0004 12 6 6.0021 6.3565 0.0001 13 1 5.3882 7.1478 0.4303 14 6 7.4332 6.3134 0.5613 15 6 7.9025 6.0154 -0.8725 16 1 7.9242 4.9525 -1.1128 17 6 9.1756 6.7271 -1.2512 18 6 10.2905 5.9973 -1.6199 19 6 11.4601 6.6487 -1.9684 20 9 12.5499 5.9360 -2.3282 21 6 11.5126 8.0367 -1.9468 22 8 12.6606 8.6801 -2.2882 23 6 12.6416 10.1083 -2.2438 24 6 10.3921 8.7646 -1.5765 25 6 9.2247 8.1088 -1.2353 26 6 6.6286 6.7298 -1.3538 27 6 4.0676 2.5003 -0.0004 28 6 3.4352 1.2789 0.0001 29 6 4.2504 0.0114 -0.0003 30 8 4.2155 -0.5777 1.3011 31 14 6.0130 0.4067 -0.4559 32 1 -0.3634 0.5138 0.8899 33 1 -0.3633 0.5138 -0.8900 34 1 -0.3632 -1.0277 0.0005 35 1 0.2086 2.3111 -0.0005 36 1 -0.5525 4.0415 0.9065 37 1 -0.7188 5.5760 0.0204 38 1 -0.5600 4.0447 -0.8734 39 1 5.8579 4.2382 0.0000 40 1 7.7813 7.2727 0.9442 41 1 7.6050 5.4915 1.2565 42 1 10.2483 4.9183 -1.6358 43 1 12.4117 10.4372 -1.2303 44 1 13.6178 10.4939 -2.5380 45 1 11.8810 10.4830 -2.9287 46 1 10.4303 9.8437 -1.5593 47 1 8.3507 8.6762 -0.9515 48 1 6.1506 6.2444 -2.2047 49 1 6.7566 7.8032 -1.4946 50 1 5.1465 2.5501 -0.0004 51 1 3.8353 -0.6873 -0.7267 52 1 3.3270 -0.8100 1.6041 53 1 6.8342 -0.8302 -0.4289 54 1 6.0628 1.0200 -1.8075 There are 77 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 77 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_12297780.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:49 Heat of formation + Delta-G solvation = -130.276351 kcal Electronic energy + Delta-G solvation = -40178.105935 eV Core-core repulsion = 34770.783947 eV Total energy + Delta-G solvation = -5407.321989 eV No. of doubly occupied orbitals = 77 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 418.172 amu Computer time = 1.55 seconds Orbital eigenvalues (eV) -49.82854 -42.15921 -41.47862 -40.73848 -40.14420 -39.42644 -38.39366 -37.83038 -36.99040 -34.40837 -32.24477 -31.93549 -31.73913 -30.90684 -28.99738 -28.43309 -28.12455 -26.57025 -26.14225 -25.89532 -24.60588 -23.78516 -23.04202 -22.39906 -21.60979 -20.28918 -19.91189 -19.37439 -18.74776 -18.53832 -17.99772 -17.72945 -17.56947 -17.27531 -17.16963 -17.15211 -16.74644 -16.60363 -16.27615 -16.17428 -16.05551 -15.78628 -15.75515 -15.61553 -15.51841 -15.47002 -15.16613 -14.75664 -14.30017 -14.21218 -14.09648 -13.99528 -13.64369 -13.59586 -13.50651 -13.37663 -13.26556 -13.00214 -12.92072 -12.68112 -12.55289 -12.51967 -12.30124 -12.17492 -12.12811 -11.74872 -11.66661 -11.38995 -11.35161 -11.24978 -11.16441 -10.84886 -10.05008 -9.92190 -9.90357 -9.19879 -9.06986 -4.94885 -0.28050 0.07693 0.13814 0.22352 1.37414 1.61396 1.75669 1.99829 2.05115 2.12134 2.18098 2.21921 2.51892 2.61153 3.22400 3.44371 3.51130 3.57175 3.65076 3.69342 3.73242 3.82891 3.83522 3.94299 4.03882 4.09239 4.11436 4.17609 4.22557 4.24444 4.26461 4.27253 4.29250 4.29600 4.35727 4.35746 4.37094 4.56937 4.63342 4.66667 4.69724 4.74775 4.75699 4.86669 4.89490 4.95066 4.96644 4.99607 5.02960 5.12228 5.16255 5.23315 5.26761 5.28749 5.54272 5.69341 5.74383 5.97725 6.26514 6.29476 6.59108 6.61708 7.29917 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.013 3.987 2 O -0.318 6.318 3 C 0.204 3.796 4 C -0.308 4.308 5 C 0.216 3.784 6 O -0.303 6.303 7 C 0.010 3.990 8 C -0.224 4.224 9 C 0.567 3.433 10 O -0.562 6.562 11 N -0.701 5.701 12 C 0.116 3.884 13 H 0.088 0.912 14 C -0.124 4.124 15 C -0.065 4.065 16 H 0.117 0.883 17 C -0.076 4.076 18 C -0.112 4.112 19 C 0.034 3.966 20 F -0.152 7.152 21 C 0.073 3.927 22 O -0.341 6.341 23 C 0.018 3.982 24 C -0.179 4.179 25 C -0.082 4.082 26 C -0.144 4.144 27 C 0.009 3.991 28 C -0.200 4.200 29 C -0.075 4.075 30 O -0.547 6.547 31 Si 0.802 3.198 32 H 0.071 0.929 33 H 0.067 0.933 34 H 0.122 0.878 35 H 0.164 0.836 36 H 0.072 0.928 37 H 0.113 0.887 38 H 0.070 0.930 39 H 0.412 0.588 40 H 0.106 0.894 41 H 0.094 0.906 42 H 0.158 0.842 43 H 0.071 0.929 44 H 0.114 0.886 45 H 0.069 0.931 46 H 0.158 0.842 47 H 0.156 0.844 48 H 0.065 0.935 49 H 0.101 0.899 50 H 0.166 0.834 51 H 0.070 0.930 52 H 0.374 0.626 53 H -0.296 1.296 54 H -0.252 1.252 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.742 0.409 1.857 5.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.231 6.231 3 C 0.156 3.844 4 C -0.327 4.327 5 C 0.166 3.834 6 O -0.214 6.214 7 C -0.084 4.084 8 C -0.229 4.229 9 C 0.356 3.644 10 O -0.441 6.441 11 N -0.354 5.354 12 C 0.011 3.989 13 H 0.106 0.894 14 C -0.162 4.162 15 C -0.083 4.083 16 H 0.135 0.865 17 C -0.076 4.076 18 C -0.130 4.130 19 C 0.015 3.985 20 F -0.131 7.131 21 C 0.027 3.973 22 O -0.255 6.255 23 C -0.076 4.076 24 C -0.197 4.197 25 C -0.100 4.100 26 C -0.182 4.182 27 C -0.009 4.009 28 C -0.201 4.201 29 C -0.183 4.183 30 O -0.353 6.353 31 Si 0.702 3.298 32 H 0.090 0.910 33 H 0.086 0.914 34 H 0.141 0.859 35 H 0.182 0.818 36 H 0.090 0.910 37 H 0.131 0.869 38 H 0.089 0.911 39 H 0.250 0.750 40 H 0.124 0.876 41 H 0.113 0.887 42 H 0.175 0.825 43 H 0.089 0.911 44 H 0.132 0.868 45 H 0.088 0.912 46 H 0.176 0.824 47 H 0.174 0.826 48 H 0.084 0.916 49 H 0.120 0.880 50 H 0.183 0.817 51 H 0.087 0.913 52 H 0.222 0.778 53 H -0.223 1.223 54 H -0.177 1.177 Dipole moment (debyes) X Y Z Total from point charges -3.597 1.007 1.188 3.919 hybrid contribution -1.679 -1.137 -0.599 2.114 sum -5.276 -0.131 0.589 5.310 Atomic orbital electron populations 1.23483 0.75695 1.06198 1.02724 1.86036 1.24015 1.26064 1.86940 1.18899 0.91462 0.84363 0.89626 1.21418 1.02124 0.90656 1.18496 1.18989 0.90313 0.85573 0.88502 1.86366 1.20677 1.28299 1.86013 1.23474 0.76708 1.05637 1.02602 1.19191 0.90927 0.93861 1.18876 1.17968 0.82562 0.88195 0.75709 1.90818 1.65627 1.36879 1.50808 1.45463 1.05299 1.09595 1.75054 1.21851 0.93774 0.85600 0.97698 0.89409 1.23422 0.92174 1.04758 0.95820 1.21618 0.89415 1.00343 0.96953 0.86486 1.19610 0.94723 0.93451 0.99858 1.21144 0.90269 1.01896 0.99696 1.17448 0.85589 0.86953 1.08532 1.91452 1.53355 1.78195 1.90126 1.19330 0.87820 0.90834 0.99353 1.86106 1.32403 1.23478 1.83504 1.23390 1.05395 0.75853 1.02972 1.21408 0.92105 1.01524 1.04665 1.21212 0.97754 0.94017 0.97007 1.23599 0.95274 1.02020 0.97344 1.20858 0.99682 0.88966 0.91421 1.19560 0.91170 0.96527 1.12823 1.25475 1.12945 0.91698 0.88136 1.86684 1.34286 1.82261 1.32061 0.92651 0.72225 0.83900 0.80990 0.91013 0.91442 0.85940 0.81827 0.90987 0.86858 0.91128 0.74975 0.87603 0.88700 0.82475 0.91068 0.86808 0.91218 0.82442 0.82617 0.91570 0.88021 0.81747 0.91267 0.77786 1.22297 1.17721 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.10 9.80 113.37 1.11 1.01 16 2 O -0.32 0.40 9.36 -90.38 -0.85 -0.45 16 3 C 0.20 0.17 6.62 22.61 0.15 0.32 16 4 C -0.31 -0.14 8.01 22.43 0.18 0.04 16 5 C 0.22 1.11 6.70 22.82 0.15 1.26 16 6 O -0.30 -2.21 8.56 -68.70 -0.59 -2.80 16 7 C 0.01 -0.02 9.81 113.37 1.11 1.09 16 8 C -0.22 -0.95 5.89 -20.00 -0.12 -1.06 16 9 C 0.57 3.60 7.76 86.63 0.67 4.27 16 10 O -0.56 -8.32 14.77 16.89 0.25 -8.07 16 11 N -0.70 1.13 5.22 -443.42 -2.31 -1.18 16 12 C 0.12 -0.30 4.30 45.52 0.20 -0.11 16 13 H 0.09 0.16 7.50 -2.39 -0.02 0.14 16 14 C -0.12 0.92 7.29 31.12 0.23 1.15 16 15 C -0.07 0.42 3.86 -11.02 -0.04 0.38 16 16 H 0.12 -1.10 8.09 -2.39 -0.02 -1.12 16 17 C -0.08 0.21 5.29 -19.86 -0.11 0.10 16 18 C -0.11 -0.09 9.68 22.30 0.22 0.13 16 19 C 0.03 0.24 7.31 22.45 0.16 0.40 16 20 F -0.15 -1.78 17.11 44.97 0.77 -1.01 16 21 C 0.07 0.40 6.69 22.53 0.15 0.55 16 22 O -0.34 -2.34 10.36 -93.07 -0.96 -3.31 16 23 C 0.02 -0.05 9.81 113.37 1.11 1.07 16 24 C -0.18 0.11 9.04 22.36 0.20 0.32 16 25 C -0.08 0.26 8.62 22.26 0.19 0.45 16 26 C -0.14 0.57 7.26 31.12 0.23 0.80 16 27 C 0.01 -0.01 8.14 22.50 0.18 0.18 16 28 C -0.20 -0.15 5.27 -19.80 -0.10 -0.26 16 29 C -0.08 -0.04 2.32 71.24 0.17 0.12 16 30 O -0.55 -1.12 12.65 -148.98 -1.89 -3.00 16 31 Si 0.80 -1.76 30.16 68.60 2.07 0.31 16 32 H 0.07 -0.69 7.65 -2.39 -0.02 -0.71 16 33 H 0.07 -0.61 7.65 -2.39 -0.02 -0.63 16 34 H 0.12 -1.33 8.14 -2.39 -0.02 -1.35 16 35 H 0.16 -0.77 4.50 -2.91 -0.01 -0.79 16 36 H 0.07 -0.40 7.67 -2.39 -0.02 -0.42 16 37 H 0.11 -0.45 8.14 -2.38 -0.02 -0.47 16 38 H 0.07 -0.38 7.65 -2.39 -0.02 -0.40 16 39 H 0.41 -3.31 6.72 -92.71 -0.62 -3.93 16 40 H 0.11 -0.86 7.73 -2.39 -0.02 -0.88 16 41 H 0.09 -0.90 8.14 -2.38 -0.02 -0.92 16 42 H 0.16 -0.51 8.05 -2.91 -0.02 -0.53 16 43 H 0.07 -0.39 7.66 -2.39 -0.02 -0.41 16 44 H 0.11 -0.60 8.14 -2.38 -0.02 -0.62 16 45 H 0.07 -0.36 7.66 -2.39 -0.02 -0.38 16 46 H 0.16 -0.85 6.30 -2.91 -0.02 -0.87 16 47 H 0.16 -1.22 6.64 -2.91 -0.02 -1.24 16 48 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 49 H 0.10 -0.54 6.30 -2.38 -0.02 -0.55 16 50 H 0.17 -1.24 3.43 -2.91 -0.01 -1.25 16 51 H 0.07 0.09 7.82 -2.39 -0.02 0.08 16 52 H 0.37 -0.62 8.59 -74.06 -0.64 -1.26 16 53 H -0.30 -1.55 7.11 99.48 0.71 -0.84 16 54 H -0.25 0.26 7.11 99.48 0.71 0.97 16 Total: 0.00 -28.12 440.19 2.31 -25.81 By element: Atomic # 1 Polarization: -18.29 SS G_CDS: -0.23 Total: -18.51 kcal Atomic # 6 Polarization: 6.17 SS G_CDS: 6.04 Total: 12.21 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -2.31 Total: -1.18 kcal Atomic # 8 Polarization: -13.59 SS G_CDS: -4.03 Total: -17.63 kcal Atomic # 9 Polarization: -1.78 SS G_CDS: 0.77 Total: -1.01 kcal Atomic # 14 Polarization: -1.76 SS G_CDS: 2.07 Total: 0.31 kcal Total: -28.12 2.31 -25.81 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_12297780.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -104.467 kcal (2) G-P(sol) polarization free energy of solvation -28.116 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -132.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.307 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.810 kcal (6) G-S(sol) free energy of system = (1) + (5) -130.276 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.55 seconds