Wall clock time and date at job start Tue Mar 9 2021 12:56:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35953 * 117.00128 * 2 1 4 4 C 1.38909 * 120.06810 * 179.97438 * 3 2 1 5 5 F 1.35101 * 120.04401 * 0.04682 * 4 3 2 6 6 C 1.38326 * 119.90968 * 180.02562 * 4 3 2 7 7 C 1.38263 * 120.02912 * 0.02562 * 6 4 3 8 8 C 1.50701 * 119.93690 * 179.97438 * 7 6 4 9 9 H 1.09002 * 112.85178 * 9.66397 * 8 7 6 10 10 C 1.53785 * 113.69000 * 140.93555 * 8 7 6 11 11 C 1.53779 * 87.08093 * 139.98979 * 10 8 7 12 12 H 1.08999 * 113.68761 * 220.00455 * 11 10 8 13 13 N 1.46504 * 113.61484 * 89.11287 * 11 10 8 14 14 C 1.34781 * 119.99665 * 107.49929 * 13 11 10 15 15 O 1.21568 * 119.99873 * 0.02562 * 14 13 11 16 16 C 1.47691 * 119.99803 * 180.02562 * 14 13 11 17 17 C 1.39824 * 120.16775 * 180.02562 * 16 14 13 18 18 F 1.35101 * 120.10785 * 359.97438 * 17 16 14 19 19 C 1.38311 * 119.78281 * 180.02562 * 17 16 14 20 20 C 1.38208 * 120.11803 * 359.97438 * 19 17 16 21 21 C 1.38467 * 120.33612 * 359.97438 * 20 19 17 22 22 C 1.50698 * 119.88975 * 180.02562 * 21 20 19 23 23 O 1.42896 * 109.46975 * 244.99994 * 22 21 20 24 24 Si 1.86302 * 109.47010 * 4.99787 * 22 21 20 25 25 C 1.37856 * 120.21536 * 359.71883 * 21 20 19 26 26 C 1.53781 * 113.61206 * 238.47091 * 8 7 6 27 27 C 1.38264 * 120.12364 * 0.26814 * 7 6 4 28 28 C 1.38183 * 120.09416 * 359.45531 * 27 7 6 29 29 H 1.08994 * 109.47093 * 60.00096 * 1 2 3 30 30 H 1.08994 * 109.46646 * 180.02562 * 1 2 3 31 31 H 1.08998 * 109.47155 * 299.99998 * 1 2 3 32 32 H 1.07997 * 119.98996 * 180.02562 * 6 4 3 33 33 H 1.09003 * 113.60734 * 254.54099 * 10 8 7 34 34 H 1.08996 * 113.61146 * 25.43597 * 10 8 7 35 35 H 0.96996 * 119.99953 * 287.50554 * 13 11 10 36 36 H 1.08004 * 119.94339 * 180.02562 * 19 17 16 37 37 H 1.07994 * 119.83532 * 180.02562 * 20 19 17 38 38 H 1.08995 * 109.47269 * 124.99797 * 22 21 20 39 39 H 0.96706 * 113.99852 * 60.00153 * 23 22 21 40 40 H 1.48498 * 109.99871 * 180.02562 * 24 22 21 41 41 H 1.48501 * 110.00225 * 301.32315 * 24 22 21 42 42 H 1.08000 * 120.05879 * 180.29443 * 25 21 20 43 43 H 1.09005 * 113.61302 * 334.48043 * 26 8 7 44 44 H 1.08996 * 113.61527 * 105.30207 * 26 8 7 45 45 H 1.07996 * 119.95107 * 179.70430 * 27 7 6 46 46 H 1.07998 * 120.01383 * 180.27437 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 3.4333 1.2857 0.0005 5 9 4.1713 0.1540 0.0001 6 6 4.0579 2.5199 0.0011 7 6 3.3023 3.6777 0.0016 8 6 3.9850 5.0213 0.0028 9 1 5.0596 4.9502 -0.1655 10 6 3.2904 6.0681 -0.8842 11 6 3.5857 7.0900 0.2263 12 1 2.7694 7.7896 0.4059 13 7 4.8834 7.7546 0.0822 14 6 4.9404 9.0453 -0.3016 15 8 3.9151 9.6581 -0.5278 16 6 6.2486 9.7152 -0.4474 17 6 6.3119 11.0543 -0.8448 18 9 5.1760 11.7406 -1.0977 19 6 7.5413 11.6736 -0.9793 20 6 8.7034 10.9715 -0.7213 21 6 8.6464 9.6456 -0.3263 22 6 9.9199 8.8897 -0.0469 23 8 10.0673 7.8359 -1.0007 24 14 11.3716 10.0504 -0.1745 25 6 7.4283 9.0165 -0.1818 26 6 3.6067 5.9034 1.2043 27 6 1.9216 3.6053 0.0072 28 6 1.2923 2.3751 0.0009 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3632 -1.0276 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 5.1363 2.5791 0.0011 33 1 3.8188 6.2706 -1.8159 34 1 2.2272 5.8787 -1.0320 35 1 5.7014 7.2657 0.2630 36 1 7.5932 12.7079 -1.2858 37 1 9.6609 11.4597 -0.8273 38 1 9.8792 8.4679 0.9572 39 1 10.1107 8.1390 -1.9181 40 1 12.6337 9.3170 0.0982 41 1 11.4196 10.6567 -1.5293 42 1 7.3866 7.9836 0.1310 43 1 2.6298 5.6691 1.6275 44 1 4.3897 5.9719 1.9594 45 1 1.3341 4.5115 0.0124 46 1 0.2137 2.3200 0.0008 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_12335834.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:56:54 Heat of formation + Delta-G solvation = -102.088800 kcal Electronic energy + Delta-G solvation = -33122.791946 eV Core-core repulsion = 28195.677907 eV Total energy + Delta-G solvation = -4927.114038 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.132 amu Computer time = 1.10 seconds Orbital eigenvalues (eV) -50.01054 -49.88373 -41.81361 -41.11718 -40.38068 -39.52089 -37.96722 -37.55088 -34.73218 -32.64261 -32.28258 -31.84301 -31.06336 -28.41435 -26.68908 -26.63188 -26.27226 -25.20609 -23.91574 -23.30483 -22.49600 -21.70358 -20.33544 -19.43935 -19.20688 -18.44328 -18.35460 -18.01544 -17.59437 -17.35986 -17.20266 -16.98971 -16.87897 -16.25539 -16.20039 -16.10266 -16.03726 -15.84737 -15.69581 -15.63219 -15.31402 -15.11511 -14.72984 -14.47817 -14.37370 -14.10585 -13.72452 -13.63855 -13.56339 -13.44080 -13.20844 -13.07653 -12.98541 -12.84279 -12.36771 -12.27948 -12.21782 -11.84561 -11.71564 -11.49344 -11.29058 -11.22403 -10.61908 -10.40676 -10.11341 -9.97659 -9.83865 -9.13402 -4.87693 -0.49781 -0.02564 0.07446 0.15674 1.31845 1.59524 1.62804 1.91887 2.02202 2.17057 2.44740 2.47586 3.05149 3.16171 3.33777 3.43072 3.47143 3.53542 3.57604 3.62708 3.70532 3.76405 3.94535 3.99684 4.02847 4.10560 4.15367 4.21126 4.32098 4.32735 4.46764 4.50498 4.60319 4.63180 4.68070 4.77160 4.78442 4.80102 4.85767 4.88794 4.89435 4.95557 5.01884 5.05762 5.13801 5.15056 5.16003 5.42174 5.59478 5.61197 5.62903 6.24459 6.35715 6.50727 7.04904 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.075 3.925 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.112 4.112 7 C -0.078 4.078 8 C -0.062 4.062 9 H 0.112 0.888 10 C -0.142 4.142 11 C 0.112 3.888 12 H 0.089 0.911 13 N -0.692 5.692 14 C 0.557 3.443 15 O -0.570 6.570 16 C -0.188 4.188 17 C 0.134 3.866 18 F -0.137 7.137 19 C -0.153 4.153 20 C -0.053 4.053 21 C -0.131 4.131 22 C -0.074 4.074 23 O -0.544 6.544 24 Si 0.759 3.241 25 C -0.023 4.023 26 C -0.123 4.123 27 C -0.082 4.082 28 C -0.178 4.178 29 H 0.070 0.930 30 H 0.114 0.886 31 H 0.071 0.929 32 H 0.155 0.845 33 H 0.066 0.934 34 H 0.103 0.897 35 H 0.415 0.585 36 H 0.166 0.834 37 H 0.165 0.835 38 H 0.138 0.862 39 H 0.388 0.612 40 H -0.307 1.307 41 H -0.278 1.278 42 H 0.160 0.840 43 H 0.108 0.892 44 H 0.090 0.910 45 H 0.157 0.843 46 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.282 2.257 2.676 4.179 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.130 4.130 7 C -0.078 4.078 8 C -0.080 4.080 9 H 0.131 0.869 10 C -0.180 4.180 11 C 0.007 3.993 12 H 0.107 0.893 13 N -0.344 5.344 14 C 0.345 3.655 15 O -0.450 6.450 16 C -0.192 4.192 17 C 0.114 3.886 18 F -0.115 7.115 19 C -0.171 4.171 20 C -0.071 4.071 21 C -0.131 4.131 22 C -0.183 4.183 23 O -0.352 6.352 24 Si 0.665 3.335 25 C -0.042 4.042 26 C -0.161 4.161 27 C -0.099 4.099 28 C -0.196 4.196 29 H 0.088 0.912 30 H 0.133 0.867 31 H 0.090 0.910 32 H 0.172 0.828 33 H 0.085 0.915 34 H 0.122 0.878 35 H 0.253 0.747 36 H 0.183 0.817 37 H 0.182 0.818 38 H 0.156 0.844 39 H 0.237 0.763 40 H -0.235 1.235 41 H -0.204 1.204 42 H 0.177 0.823 43 H 0.126 0.874 44 H 0.109 0.891 45 H 0.174 0.826 46 H 0.177 0.823 Dipole moment (debyes) X Y Z Total from point charges 2.318 2.272 2.647 4.188 hybrid contribution -0.389 -1.019 -1.218 1.635 sum 1.929 1.253 1.429 2.708 Atomic orbital electron populations 1.23400 0.75779 1.05741 1.02721 1.86109 1.24044 1.26458 1.88794 1.19324 0.90988 0.86491 1.00348 1.17433 0.86622 0.83277 1.11160 1.91454 1.76829 1.50140 1.94642 1.21110 1.01841 0.89253 1.00839 1.19586 0.93401 0.94108 1.00751 1.21562 1.00276 0.88818 0.97345 0.86946 1.23586 1.02376 0.94514 0.97542 1.21926 0.85782 0.93761 0.97825 0.89271 1.45440 1.09980 1.10631 1.68350 1.18295 0.88346 0.82322 0.76498 1.90842 1.36850 1.65870 1.51423 1.20046 0.94595 0.94177 1.10413 1.18209 0.82968 0.89535 0.97900 1.91561 1.49907 1.79069 1.90957 1.21373 0.89532 1.02859 1.03381 1.21418 0.98828 0.93252 0.93565 1.20380 0.95845 0.94806 1.02101 1.25144 1.00253 0.96179 0.96767 1.86604 1.94876 1.33428 1.20315 0.94146 0.73805 0.81014 0.84500 1.21208 0.89180 1.00195 0.93584 1.23418 1.04498 0.92119 0.96047 1.21201 0.94139 0.97859 0.96739 1.21422 1.01451 0.90820 1.05912 0.91170 0.86735 0.91042 0.82770 0.91499 0.87831 0.74656 0.81688 0.81795 0.84437 0.76262 1.23500 1.20415 0.82272 0.87397 0.89149 0.82575 0.82286 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.28 10.36 -93.02 -0.96 -3.24 16 3 C 0.07 0.41 6.69 22.53 0.15 0.56 16 4 C 0.03 0.25 7.31 22.45 0.16 0.41 16 5 F -0.15 -1.78 17.11 44.97 0.77 -1.01 16 6 C -0.11 -0.13 9.68 22.30 0.22 0.09 16 7 C -0.08 0.19 5.29 -19.85 -0.11 0.09 16 8 C -0.06 0.39 3.85 -11.01 -0.04 0.34 16 9 H 0.11 -0.95 8.08 -2.39 -0.02 -0.97 16 10 C -0.14 0.56 7.26 31.12 0.23 0.79 16 11 C 0.11 -0.29 4.32 45.52 0.20 -0.09 16 12 H 0.09 0.17 7.46 -2.39 -0.02 0.16 16 13 N -0.69 1.51 5.21 -443.04 -2.31 -0.80 16 14 C 0.56 3.13 7.77 86.74 0.67 3.80 16 15 O -0.57 -8.66 14.94 -3.93 -0.06 -8.72 16 16 C -0.19 -0.35 5.88 -20.05 -0.12 -0.47 16 17 C 0.13 0.55 7.29 22.67 0.17 0.71 16 18 F -0.14 -1.53 15.55 44.97 0.70 -0.83 16 19 C -0.15 0.46 10.01 22.28 0.22 0.68 16 20 C -0.05 0.37 8.66 22.32 0.19 0.57 16 21 C -0.13 0.88 5.34 -19.90 -0.11 0.77 16 22 C -0.07 0.59 2.80 71.24 0.20 0.79 16 23 O -0.54 2.49 12.83 -148.98 -1.91 0.58 16 24 Si 0.76 -5.76 29.87 68.60 2.05 -3.71 16 25 C -0.02 0.11 9.17 22.52 0.21 0.32 16 26 C -0.12 0.88 7.29 31.12 0.23 1.11 16 27 C -0.08 0.26 8.52 22.26 0.19 0.45 16 28 C -0.18 0.13 9.04 22.36 0.20 0.34 16 29 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 30 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 31 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 32 H 0.15 -0.38 8.05 -2.91 -0.02 -0.40 16 33 H 0.07 -0.10 8.14 -2.39 -0.02 -0.12 16 34 H 0.10 -0.54 6.41 -2.39 -0.02 -0.56 16 35 H 0.41 -3.46 6.73 -92.71 -0.62 -4.09 16 36 H 0.17 -1.12 8.06 -2.91 -0.02 -1.14 16 37 H 0.17 -1.93 4.82 -2.91 -0.01 -1.94 16 38 H 0.14 -1.45 7.96 -2.39 -0.02 -1.47 16 39 H 0.39 -3.67 8.70 -74.05 -0.64 -4.32 16 40 H -0.31 -0.48 7.11 99.48 0.71 0.23 16 41 H -0.28 1.15 7.00 99.48 0.70 1.85 16 42 H 0.16 -1.58 6.41 -2.91 -0.02 -1.60 16 43 H 0.11 -0.87 7.61 -2.38 -0.02 -0.88 16 44 H 0.09 -0.79 8.14 -2.39 -0.02 -0.80 16 45 H 0.16 -1.24 6.72 -2.91 -0.02 -1.26 16 46 H 0.16 -0.90 6.30 -2.91 -0.02 -0.92 16 Total: 0.00 -27.23 389.04 2.08 -25.15 By element: Atomic # 1 Polarization: -19.56 SS G_CDS: -0.17 Total: -19.73 kcal Atomic # 6 Polarization: 8.34 SS G_CDS: 3.97 Total: 12.31 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: -2.31 Total: -0.80 kcal Atomic # 8 Polarization: -8.44 SS G_CDS: -2.93 Total: -11.38 kcal Atomic # 9 Polarization: -3.31 SS G_CDS: 1.47 Total: -1.84 kcal Atomic # 14 Polarization: -5.76 SS G_CDS: 2.05 Total: -3.71 kcal Total: -27.23 2.08 -25.15 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_12335834.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.944 kcal (2) G-P(sol) polarization free energy of solvation -27.226 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -104.170 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.081 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.145 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.089 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.10 seconds