Wall clock time and date at job start Tue Mar 9 2021 12:57:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35947 * 116.99795 * 2 1 4 4 C 1.38908 * 120.06145 * 180.02562 * 3 2 1 5 5 F 1.35099 * 120.04852 * 359.96071 * 4 3 2 6 6 C 1.38340 * 119.90427 * 179.72922 * 4 3 2 7 7 C 1.38258 * 120.02712 * 0.52808 * 6 4 3 8 8 C 1.50698 * 119.93643 * 179.72734 * 7 6 4 9 9 H 1.09002 * 112.84863 * 190.92285 * 8 7 6 10 10 C 1.53787 * 113.61263 * 322.22663 * 8 7 6 11 11 C 1.53786 * 87.07862 * 139.98194 * 10 8 7 12 12 H 1.09004 * 113.68744 * 220.00471 * 11 10 8 13 13 N 1.46498 * 113.61263 * 89.11822 * 11 10 8 14 14 C 1.34780 * 120.00153 * 107.50267 * 13 11 10 15 15 O 1.21697 * 119.99622 * 359.97438 * 14 13 11 16 16 C 1.46423 * 119.99774 * 179.97438 * 14 13 11 17 17 C 1.34815 * 119.99661 * 179.97438 * 16 14 13 18 18 C 1.47207 * 120.00031 * 179.97438 * 17 16 14 19 19 C 1.39833 * 120.16914 * 179.97438 * 18 17 16 20 20 C 1.37891 * 119.82645 * 179.70073 * 19 18 17 21 21 C 1.38402 * 120.17107 * 0.27980 * 20 19 18 22 22 C 1.50697 * 119.83055 * 180.02562 * 21 20 19 23 23 O 1.42902 * 109.47208 * 299.99997 * 22 21 20 24 24 Si 1.86307 * 109.47414 * 180.02562 * 22 21 20 25 25 C 1.38412 * 120.34376 * 0.02562 * 21 20 19 26 26 C 1.37884 * 120.16862 * 359.97163 * 25 21 20 27 27 C 1.53777 * 87.08094 * 334.56509 * 11 10 8 28 28 C 1.38260 * 120.12634 * 359.45093 * 7 6 4 29 29 C 1.38178 * 120.09796 * 0.29441 * 28 7 6 30 30 H 1.08998 * 109.47222 * 59.99936 * 1 2 3 31 31 H 1.09006 * 109.46870 * 179.97438 * 1 2 3 32 32 H 1.08997 * 109.47062 * 299.99201 * 1 2 3 33 33 H 1.08001 * 119.98609 * 180.24782 * 6 4 3 34 34 H 1.09001 * 113.61273 * 25.43615 * 10 8 7 35 35 H 1.08993 * 113.61284 * 254.52936 * 10 8 7 36 36 H 0.96996 * 120.00030 * 287.49856 * 13 11 10 37 37 H 1.07996 * 120.00401 * 359.97438 * 16 14 13 38 38 H 1.07996 * 119.99938 * 359.97438 * 17 16 14 39 39 H 1.08002 * 120.09041 * 359.97438 * 19 18 17 40 40 H 1.07995 * 119.91963 * 180.30828 * 20 19 18 41 41 H 1.08997 * 109.47383 * 60.00380 * 22 21 20 42 42 H 0.96700 * 113.99728 * 300.00145 * 23 22 21 43 43 H 1.48489 * 110.00036 * 179.97438 * 24 22 21 44 44 H 1.48499 * 109.99743 * 301.32313 * 24 22 21 45 45 H 1.08003 * 119.91230 * 180.02562 * 25 21 20 46 46 H 1.08004 * 120.08782 * 180.02562 * 26 25 21 47 47 H 1.09006 * 113.60925 * 139.98370 * 27 11 10 48 48 H 1.08995 * 113.62029 * 270.80112 * 27 11 10 49 49 H 1.07998 * 119.95311 * 180.28086 * 28 7 6 50 50 H 1.07998 * 120.02090 * 179.97438 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 3.4333 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0003 6 6 4.0579 2.5199 -0.0062 7 6 3.3023 3.6777 -0.0003 8 6 3.9849 5.0212 -0.0003 9 1 3.2981 5.8449 0.1949 10 6 5.2607 5.0640 0.8574 11 6 5.8864 5.9197 -0.2567 12 1 6.9280 5.6745 -0.4645 13 7 5.6635 7.3577 -0.0873 14 6 6.6822 8.1586 0.2834 15 8 7.7871 7.6870 0.4779 16 6 6.4594 9.5959 0.4520 17 6 7.4783 10.3969 0.8234 18 6 7.2545 11.8420 0.9924 19 6 8.3087 12.6759 1.3780 20 6 8.0927 14.0295 1.5282 21 6 6.8351 14.5623 1.3041 22 6 6.6078 16.0427 1.4700 23 8 6.9122 16.4239 2.8132 24 14 4.8261 16.4428 1.1004 25 6 5.7851 13.7424 0.9284 26 6 5.9854 12.3869 0.7740 27 6 4.8919 5.2514 -1.2206 28 6 1.9216 3.6053 -0.0002 29 6 1.2922 2.3751 0.0002 30 1 -0.3633 0.5138 -0.8900 31 1 -0.3633 -1.0277 -0.0005 32 1 -0.3633 0.5137 0.8900 33 1 5.1363 2.5791 -0.0107 34 1 5.7369 4.0912 0.9804 35 1 5.1356 5.5974 1.7996 36 1 4.7828 7.7335 -0.2421 37 1 5.4790 10.0144 0.2790 38 1 8.4586 9.9783 0.9968 39 1 9.2906 12.2617 1.5533 40 1 8.9069 14.6757 1.8211 41 1 7.2533 16.5888 0.7822 42 1 6.3745 15.9760 3.4806 43 1 4.5888 17.8998 1.2610 44 1 4.4875 16.0219 -0.2829 45 1 4.8068 14.1656 0.7549 46 1 5.1653 11.7484 0.4803 47 1 4.4693 5.9362 -1.9558 48 1 5.2678 4.3307 -1.6667 49 1 1.3341 4.5114 -0.0001 50 1 0.2137 2.3200 0.0007 There are 70 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 70 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_12360594.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:57:28 Heat of formation + Delta-G solvation = -46.781658 kcal Electronic energy + Delta-G solvation = -32510.006767 eV Core-core repulsion = 27770.981243 eV Total energy + Delta-G solvation = -4739.025525 eV No. of doubly occupied orbitals = 70 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.157 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -49.87890 -41.64701 -40.91190 -40.55577 -39.70985 -37.97746 -37.71892 -35.04524 -34.40645 -32.20361 -31.75293 -31.48663 -30.92099 -28.50026 -27.29738 -26.67046 -25.80109 -24.26916 -23.93905 -23.69519 -22.58652 -22.06317 -20.56656 -20.10790 -19.40048 -18.86222 -18.21709 -17.88448 -17.75573 -17.22102 -17.19069 -16.80918 -16.54537 -16.20511 -16.17241 -16.09237 -15.85689 -15.77795 -15.59683 -15.31926 -15.09995 -15.03931 -14.59925 -14.52255 -14.17166 -14.11727 -13.90640 -13.77902 -13.55144 -13.45720 -13.24771 -13.07970 -13.01132 -12.85514 -12.25451 -12.21196 -12.14621 -12.02178 -12.00755 -11.68850 -11.45149 -11.33883 -11.21624 -11.06859 -10.42570 -10.09951 -9.97065 -9.94449 -9.22143 -9.11447 -4.98895 -0.53483 0.10063 0.17456 0.41038 0.90158 1.32319 1.64648 1.98589 2.15120 2.19078 2.24418 2.48003 2.83425 3.18444 3.48234 3.49064 3.59180 3.67185 3.69594 3.73347 3.74768 3.83758 3.94402 3.96459 4.00703 4.19013 4.21275 4.23448 4.28222 4.34242 4.34795 4.37529 4.45612 4.51610 4.53158 4.66402 4.69685 4.79707 4.85019 4.85906 4.91138 4.92822 4.99566 5.04827 5.08899 5.10641 5.13305 5.19336 5.23069 5.40085 5.48852 5.50613 5.61655 5.64264 5.67982 5.91669 6.26794 6.57510 6.76483 7.25079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.074 3.926 4 C 0.033 3.967 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.080 4.080 8 C -0.055 4.055 9 H 0.129 0.871 10 C -0.147 4.147 11 C 0.113 3.887 12 H 0.079 0.921 13 N -0.692 5.692 14 C 0.543 3.457 15 O -0.594 6.594 16 C -0.205 4.205 17 C -0.023 4.023 18 C -0.081 4.081 19 C -0.104 4.104 20 C -0.109 4.109 21 C -0.112 4.112 22 C -0.081 4.081 23 O -0.557 6.557 24 Si 0.783 3.217 25 C -0.122 4.122 26 C -0.093 4.093 27 C -0.127 4.127 28 C -0.076 4.076 29 C -0.179 4.179 30 H 0.072 0.928 31 H 0.113 0.887 32 H 0.071 0.929 33 H 0.147 0.853 34 H 0.089 0.911 35 H 0.072 0.928 36 H 0.420 0.580 37 H 0.168 0.832 38 H 0.119 0.881 39 H 0.134 0.866 40 H 0.126 0.874 41 H 0.104 0.896 42 H 0.396 0.604 43 H -0.304 1.304 44 H -0.281 1.281 45 H 0.151 0.849 46 H 0.161 0.839 47 H 0.094 0.906 48 H 0.094 0.906 49 H 0.166 0.834 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.152 3.394 -0.071 10.705 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.028 3.972 4 C 0.013 3.987 5 F -0.132 7.132 6 C -0.134 4.134 7 C -0.080 4.080 8 C -0.073 4.073 9 H 0.146 0.854 10 C -0.185 4.185 11 C 0.007 3.993 12 H 0.097 0.903 13 N -0.343 5.343 14 C 0.334 3.666 15 O -0.476 6.476 16 C -0.225 4.225 17 C -0.043 4.043 18 C -0.081 4.081 19 C -0.122 4.122 20 C -0.127 4.127 21 C -0.113 4.113 22 C -0.190 4.190 23 O -0.365 6.365 24 Si 0.689 3.311 25 C -0.139 4.139 26 C -0.110 4.110 27 C -0.165 4.165 28 C -0.094 4.094 29 C -0.197 4.197 30 H 0.090 0.910 31 H 0.131 0.869 32 H 0.090 0.910 33 H 0.165 0.835 34 H 0.107 0.893 35 H 0.091 0.909 36 H 0.258 0.742 37 H 0.185 0.815 38 H 0.137 0.863 39 H 0.152 0.848 40 H 0.144 0.856 41 H 0.122 0.878 42 H 0.246 0.754 43 H -0.232 1.232 44 H -0.207 1.207 45 H 0.168 0.832 46 H 0.178 0.822 47 H 0.113 0.887 48 H 0.112 0.888 49 H 0.183 0.817 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -9.421 3.606 -0.751 10.115 hybrid contribution 0.845 -0.446 -0.201 0.977 sum -8.575 3.160 -0.951 9.188 Atomic orbital electron populations 1.23407 0.75720 1.05712 1.02801 1.86109 1.24115 1.26546 1.88809 1.19334 0.90883 0.86606 1.00378 1.17433 0.86726 0.83173 1.11341 1.91450 1.76912 1.50215 1.94671 1.21014 1.01623 0.89564 1.01222 1.19630 0.93500 0.94173 1.00738 1.21582 0.95233 0.93848 0.96650 0.85357 1.23574 0.96281 1.00561 0.98096 1.21825 0.99901 0.80107 0.97480 0.90256 1.45401 1.13144 1.06952 1.68754 1.18787 0.83852 0.88101 0.75886 1.90826 1.26073 1.77768 1.52950 1.23008 1.02023 0.91160 1.06353 1.22356 0.99223 0.91445 0.91247 1.19115 0.94662 0.92370 1.01953 1.21602 0.99260 0.93513 0.97819 1.21052 0.97176 0.95044 0.99392 1.20617 0.94386 0.96269 1.00008 1.25288 1.13571 0.92669 0.87484 1.86476 1.66163 1.68873 1.14989 0.93683 0.76254 0.78697 0.82495 1.21194 0.98754 0.93822 1.00140 1.21672 0.96558 0.95276 0.97524 1.23387 0.95247 1.01492 0.96336 1.21326 0.93788 0.98128 0.96134 1.21475 1.01511 0.90864 1.05877 0.90971 0.86859 0.91020 0.83525 0.89294 0.90925 0.74168 0.81468 0.86269 0.84813 0.85559 0.87813 0.75444 1.23237 1.20737 0.83195 0.82180 0.88714 0.88774 0.81683 0.82100 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.18 10.36 -92.96 -0.96 -3.15 16 3 C 0.07 0.37 6.69 22.53 0.15 0.52 16 4 C 0.03 0.24 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.91 17.11 44.97 0.77 -1.14 16 6 C -0.12 -0.19 8.57 22.30 0.19 0.01 16 7 C -0.08 0.26 5.29 -19.85 -0.11 0.16 16 8 C -0.06 0.41 3.86 -11.01 -0.04 0.37 16 9 H 0.13 -1.60 8.09 -2.39 -0.02 -1.62 16 10 C -0.15 0.51 7.25 31.12 0.23 0.73 16 11 C 0.11 -0.28 4.32 45.52 0.20 -0.08 16 12 H 0.08 0.28 7.46 -2.39 -0.02 0.26 16 13 N -0.69 3.04 5.26 -444.25 -2.34 0.71 16 14 C 0.54 1.32 7.74 86.37 0.67 1.98 16 15 O -0.59 -7.60 15.83 -4.34 -0.07 -7.67 16 16 C -0.21 0.65 9.41 23.62 0.22 0.88 16 17 C -0.02 0.00 9.46 23.84 0.23 0.23 16 18 C -0.08 0.11 5.87 -20.15 -0.12 -0.01 16 19 C -0.10 0.00 9.80 22.57 0.22 0.22 16 20 C -0.11 -0.02 9.59 22.23 0.21 0.19 16 21 C -0.11 0.20 5.40 -19.78 -0.11 0.10 16 22 C -0.08 0.16 2.82 71.24 0.20 0.36 16 23 O -0.56 0.40 12.76 -148.98 -1.90 -1.51 16 24 Si 0.78 -3.43 29.77 68.60 2.04 -1.38 16 25 C -0.12 0.59 8.65 22.23 0.19 0.79 16 26 C -0.09 0.48 9.41 22.57 0.21 0.70 16 27 C -0.13 0.86 7.29 31.12 0.23 1.08 16 28 C -0.08 0.39 9.70 22.26 0.22 0.60 16 29 C -0.18 0.36 9.04 22.36 0.20 0.56 16 30 H 0.07 -0.48 7.66 -2.39 -0.02 -0.50 16 31 H 0.11 -0.68 8.14 -2.38 -0.02 -0.70 16 32 H 0.07 -0.47 7.66 -2.39 -0.02 -0.48 16 33 H 0.15 -0.05 6.67 -2.91 -0.02 -0.07 16 34 H 0.09 -0.18 6.32 -2.39 -0.02 -0.20 16 35 H 0.07 -0.17 8.14 -2.39 -0.02 -0.18 16 36 H 0.42 -5.01 8.68 -92.71 -0.80 -5.81 16 37 H 0.17 -1.91 6.07 -2.91 -0.02 -1.93 16 38 H 0.12 0.39 7.52 -2.91 -0.02 0.37 16 39 H 0.13 -0.23 8.06 -2.91 -0.02 -0.25 16 40 H 0.13 0.02 8.06 -2.91 -0.02 0.00 16 41 H 0.10 -0.02 7.96 -2.39 -0.02 -0.04 16 42 H 0.40 -3.52 8.70 -74.06 -0.64 -4.16 16 43 H -0.30 -1.20 7.11 99.48 0.71 -0.49 16 44 H -0.28 0.15 7.11 99.48 0.71 0.85 16 45 H 0.15 -1.43 4.85 -2.91 -0.01 -1.44 16 46 H 0.16 -1.86 6.17 -2.91 -0.02 -1.88 16 47 H 0.09 -0.89 8.14 -2.38 -0.02 -0.91 16 48 H 0.09 -0.49 7.72 -2.39 -0.02 -0.51 16 49 H 0.17 -1.94 8.05 -2.91 -0.02 -1.96 16 50 H 0.16 -1.18 6.30 -2.91 -0.02 -1.20 16 Total: 0.00 -27.75 419.01 1.61 -26.13 By element: Atomic # 1 Polarization: -22.45 SS G_CDS: -0.40 Total: -22.85 kcal Atomic # 6 Polarization: 6.38 SS G_CDS: 4.47 Total: 10.85 kcal Atomic # 7 Polarization: 3.04 SS G_CDS: -2.34 Total: 0.71 kcal Atomic # 8 Polarization: -9.39 SS G_CDS: -2.93 Total: -12.32 kcal Atomic # 9 Polarization: -1.91 SS G_CDS: 0.77 Total: -1.14 kcal Atomic # 14 Polarization: -3.43 SS G_CDS: 2.04 Total: -1.38 kcal Total: -27.75 1.61 -26.13 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_12360594.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -20.649 kcal (2) G-P(sol) polarization free energy of solvation -27.745 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.394 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.133 kcal (6) G-S(sol) free energy of system = (1) + (5) -46.782 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds