Wall clock time and date at job start Tue Mar 9 2021 12:58:06 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.35945 * 116.99801 * 2 1 4 4 C 1.38913 * 120.05977 * 180.02562 * 3 2 1 5 5 F 1.35095 * 120.04861 * 0.02562 * 4 3 2 6 6 C 1.38335 * 119.90138 * 179.72354 * 4 3 2 7 7 C 1.38255 * 120.03292 * 0.50876 * 6 4 3 8 8 C 1.50703 * 119.93693 * 179.76403 * 7 6 4 9 9 H 1.09000 * 112.84623 * 190.91979 * 8 7 6 10 10 C 1.53780 * 113.69309 * 322.19343 * 8 7 6 11 11 C 1.53778 * 87.08092 * 139.99206 * 10 8 7 12 12 H 1.08998 * 113.68905 * 220.01231 * 11 10 8 13 13 N 1.46499 * 113.61557 * 89.11527 * 11 10 8 14 14 C 1.34777 * 119.99665 * 107.77998 * 13 11 10 15 15 O 1.21643 * 120.00232 * 359.72100 * 14 13 11 16 16 C 1.47066 * 119.99588 * 179.72420 * 14 13 11 17 17 C 1.35860 * 125.41961 * 179.69068 * 16 14 13 18 18 C 1.41598 * 107.72144 * 179.90297 * 17 16 14 19 19 C 1.40066 * 133.37860 * 180.02562 * 18 17 16 20 20 C 1.36473 * 119.82770 * 180.32910 * 19 18 17 21 21 C 1.38899 * 120.61690 * 0.02562 * 20 19 18 22 22 C 1.50703 * 119.67629 * 180.02562 * 21 20 19 23 23 O 1.42904 * 109.47232 * 119.99621 * 22 21 20 24 24 Si 1.86297 * 109.46938 * 359.97438 * 22 21 20 25 25 C 1.37716 * 120.64763 * 359.89743 * 21 20 19 26 26 C 1.39183 * 119.80731 * 0.15684 * 25 21 20 27 27 N 1.37487 * 133.18384 * 179.89529 * 26 25 21 28 28 C 1.53783 * 113.61151 * 59.73109 * 8 7 6 29 29 C 1.38260 * 120.12555 * 359.49039 * 7 6 4 30 30 C 1.38189 * 120.09495 * 0.25577 * 29 7 6 31 31 H 1.09004 * 109.46854 * 60.00110 * 1 2 3 32 32 H 1.09003 * 109.47202 * 179.97438 * 1 2 3 33 33 H 1.09000 * 109.47134 * 300.00029 * 1 2 3 34 34 H 1.08009 * 119.98438 * 180.25810 * 6 4 3 35 35 H 1.08998 * 113.61038 * 25.44240 * 10 8 7 36 36 H 1.08998 * 113.61309 * 254.53822 * 10 8 7 37 37 H 0.97001 * 119.99790 * 287.49711 * 13 11 10 38 38 H 1.08001 * 126.14243 * 0.03372 * 17 16 14 39 39 H 1.07998 * 120.08847 * 0.34907 * 19 18 17 40 40 H 1.08001 * 119.69465 * 179.97438 * 20 19 18 41 41 H 1.09000 * 109.46819 * 239.99552 * 22 21 20 42 42 H 0.96700 * 113.99772 * 300.00702 * 23 22 21 43 43 H 1.48503 * 109.99953 * 58.68304 * 24 22 21 44 44 H 1.48505 * 109.99641 * 179.97438 * 24 22 21 45 45 H 1.08000 * 120.09259 * 180.02562 * 25 21 20 46 46 H 0.96990 * 125.60585 * 359.97438 * 27 26 25 47 47 H 1.09000 * 113.61551 * 105.38462 * 28 8 7 48 48 H 1.09004 * 113.69000 * 334.48598 * 28 8 7 49 49 H 1.07994 * 119.95612 * 180.23107 * 29 7 6 50 50 H 1.07989 * 120.01412 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 3.4334 1.2855 -0.0005 5 9 4.1713 0.1539 -0.0016 6 6 4.0579 2.5198 -0.0063 7 6 3.3024 3.6776 -0.0009 8 6 3.9851 5.0212 -0.0019 9 1 3.2984 5.8449 0.1929 10 6 5.2609 5.0666 0.8555 11 6 5.8856 5.9214 -0.2598 12 1 6.9273 5.6770 -0.4675 13 7 5.6610 7.3594 -0.0926 14 6 6.6802 8.1627 0.2714 15 8 7.7852 7.6930 0.4661 16 6 6.4561 9.6072 0.4333 17 6 7.3988 10.5139 0.8006 18 6 6.7807 11.7873 0.8378 19 6 7.2445 13.0732 1.1430 20 6 6.3862 14.1332 1.0964 21 6 5.0539 13.9499 0.7491 22 6 4.1247 15.1355 0.7037 23 8 3.5935 15.2743 -0.6156 24 14 5.0636 16.6781 1.1612 25 6 4.5743 12.6957 0.4432 26 6 5.4299 11.5987 0.4847 27 7 5.2525 10.2573 0.2408 28 6 4.8917 5.2505 -1.2227 29 6 1.9217 3.6053 -0.0004 30 6 1.2923 2.3751 0.0001 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3634 -1.0277 -0.0005 33 1 -0.3633 0.5138 0.8900 34 1 5.1364 2.5790 -0.0110 35 1 5.7381 4.0946 0.9799 36 1 5.1353 5.6014 1.7970 37 1 4.7798 7.7339 -0.2480 38 1 8.4344 10.3019 1.0223 39 1 8.2787 13.2256 1.4142 40 1 6.7460 15.1238 1.3326 41 1 3.3083 14.9845 1.4100 42 1 4.2652 15.4119 -1.2975 43 1 6.1990 16.8781 0.2251 44 1 4.1584 17.8547 1.1197 45 1 3.5368 12.5635 0.1739 46 1 4.4193 9.8367 -0.0226 47 1 4.4682 5.9337 -1.9589 48 1 5.2687 4.3295 -1.6674 49 1 1.3342 4.5114 0.0001 50 1 0.2138 2.3201 0.0009 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13158378.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:06 Heat of formation + Delta-G solvation = -26.508825 kcal Electronic energy + Delta-G solvation = -34943.509044 eV Core-core repulsion = 30011.710564 eV Total energy + Delta-G solvation = -4931.798480 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.152 amu Computer time = 1.32 seconds Orbital eigenvalues (eV) -49.89609 -42.72377 -41.62088 -40.83738 -39.80211 -38.96156 -37.96493 -36.97054 -34.66144 -33.26547 -31.78025 -31.54207 -30.85361 -30.39419 -28.52960 -27.17800 -26.72471 -25.77960 -24.44373 -23.85319 -23.21783 -22.61448 -22.00712 -21.31632 -20.38131 -19.60016 -19.38250 -18.51159 -18.07388 -17.86947 -17.72288 -17.21196 -17.01214 -16.85983 -16.55385 -16.20650 -16.11413 -16.10753 -15.88361 -15.67321 -15.53168 -15.29249 -15.14373 -15.02307 -14.75924 -14.64237 -14.48632 -14.15125 -14.02076 -13.94451 -13.59345 -13.50468 -13.15806 -13.12704 -12.88662 -12.56123 -12.49503 -12.25611 -12.18391 -12.09938 -12.08998 -11.55692 -11.51207 -11.43368 -11.27754 -10.96799 -10.58984 -10.28478 -9.97631 -9.32698 -9.14487 -8.81998 -4.85534 -0.37269 0.07380 0.14562 0.53910 0.93960 1.35746 1.66447 1.72307 1.92884 2.02985 2.15701 2.16501 2.44854 2.77668 3.15648 3.41217 3.43418 3.55059 3.61669 3.66193 3.69280 3.70038 3.74940 3.89833 3.95458 4.05388 4.17736 4.23487 4.26229 4.30339 4.31341 4.32392 4.45883 4.48997 4.54253 4.60071 4.67252 4.67572 4.75934 4.80266 4.81829 4.89166 4.89808 4.99907 5.00371 5.04641 5.07289 5.14606 5.30588 5.40704 5.42272 5.54424 5.57173 5.58660 5.62986 5.98936 6.24204 6.25060 6.43787 6.51755 6.94248 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.341 6.341 3 C 0.074 3.926 4 C 0.034 3.966 5 F -0.153 7.153 6 C -0.114 4.114 7 C -0.080 4.080 8 C -0.058 4.058 9 H 0.125 0.875 10 C -0.145 4.145 11 C 0.114 3.886 12 H 0.090 0.910 13 N -0.693 5.693 14 C 0.589 3.411 15 O -0.559 6.559 16 C 0.012 3.988 17 C -0.118 4.118 18 C -0.135 4.135 19 C -0.059 4.059 20 C -0.147 4.147 21 C -0.087 4.087 22 C -0.078 4.078 23 O -0.548 6.548 24 Si 0.765 3.235 25 C -0.108 4.108 26 C 0.108 3.892 27 N -0.563 5.563 28 C -0.126 4.126 29 C -0.077 4.077 30 C -0.179 4.179 31 H 0.071 0.929 32 H 0.114 0.886 33 H 0.071 0.929 34 H 0.150 0.850 35 H 0.094 0.906 36 H 0.072 0.928 37 H 0.413 0.587 38 H 0.154 0.846 39 H 0.146 0.854 40 H 0.146 0.854 41 H 0.129 0.871 42 H 0.386 0.614 43 H -0.284 1.284 44 H -0.306 1.306 45 H 0.137 0.863 46 H 0.432 0.568 47 H 0.093 0.907 48 H 0.099 0.901 49 H 0.163 0.837 50 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.433 3.491 0.513 7.337 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.028 3.972 4 C 0.014 3.986 5 F -0.132 7.132 6 C -0.133 4.133 7 C -0.080 4.080 8 C -0.076 4.076 9 H 0.143 0.857 10 C -0.184 4.184 11 C 0.009 3.991 12 H 0.108 0.892 13 N -0.344 5.344 14 C 0.376 3.624 15 O -0.437 6.437 16 C -0.098 4.098 17 C -0.145 4.145 18 C -0.140 4.140 19 C -0.078 4.078 20 C -0.166 4.166 21 C -0.089 4.089 22 C -0.187 4.187 23 O -0.356 6.356 24 Si 0.671 3.329 25 C -0.128 4.128 26 C -0.002 4.002 27 N -0.169 5.169 28 C -0.164 4.164 29 C -0.095 4.095 30 C -0.198 4.198 31 H 0.090 0.910 32 H 0.132 0.868 33 H 0.089 0.911 34 H 0.168 0.832 35 H 0.113 0.887 36 H 0.091 0.909 37 H 0.250 0.750 38 H 0.172 0.828 39 H 0.164 0.836 40 H 0.163 0.837 41 H 0.147 0.853 42 H 0.235 0.765 43 H -0.211 1.211 44 H -0.234 1.234 45 H 0.155 0.845 46 H 0.273 0.727 47 H 0.112 0.888 48 H 0.118 0.882 49 H 0.181 0.819 50 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -5.957 3.428 0.654 6.904 hybrid contribution -0.653 -0.909 -1.359 1.760 sum -6.610 2.519 -0.705 7.109 Atomic orbital electron populations 1.23407 0.75732 1.05732 1.02764 1.86110 1.24096 1.26531 1.88785 1.19341 0.90942 0.86572 1.00317 1.17427 0.86673 0.83223 1.11228 1.91453 1.76876 1.50185 1.94649 1.21020 1.01723 0.89447 1.01083 1.19594 0.93423 0.94156 1.00876 1.21590 0.95323 0.93854 0.96807 0.85741 1.23582 0.96090 1.00758 0.97954 1.21920 1.00607 0.78879 0.97741 0.89204 1.45388 1.12356 1.07560 1.69089 1.17278 0.84463 0.84241 0.76434 1.90867 1.25202 1.75604 1.52037 1.19929 0.87141 0.91870 1.10894 1.21103 0.99826 0.90591 1.03014 1.18442 0.93485 0.94469 1.07572 1.20622 1.00809 0.89724 0.96623 1.20683 0.92815 0.99551 1.03535 1.20082 0.94597 0.94536 0.99671 1.25185 1.02762 1.03332 0.87427 1.86568 1.38060 1.94132 1.16831 0.93965 0.76086 0.73053 0.89769 1.19989 0.99391 0.89356 1.04112 1.18427 0.95388 0.84523 1.01875 1.41752 1.10409 1.05256 1.59466 1.23413 0.95115 1.01649 0.96239 1.21310 0.93865 0.98062 0.96280 1.21463 1.01490 0.90901 1.05933 0.91007 0.86816 0.91062 0.83236 0.88728 0.90900 0.75008 0.82833 0.83632 0.83726 0.85322 0.76450 1.21079 1.23430 0.84513 0.72702 0.88849 0.88236 0.81916 0.82206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.11 10.36 -92.93 -0.96 -3.08 16 3 C 0.07 0.35 6.69 22.53 0.15 0.50 16 4 C 0.03 0.23 7.31 22.45 0.16 0.39 16 5 F -0.15 -1.80 17.11 44.97 0.77 -1.03 16 6 C -0.11 -0.09 8.57 22.30 0.19 0.10 16 7 C -0.08 0.31 5.29 -19.85 -0.11 0.21 16 8 C -0.06 0.48 3.85 -11.01 -0.04 0.43 16 9 H 0.12 -1.59 8.09 -2.39 -0.02 -1.61 16 10 C -0.15 0.68 7.25 31.12 0.23 0.91 16 11 C 0.11 -0.44 4.33 45.52 0.20 -0.24 16 12 H 0.09 0.09 7.46 -2.39 -0.02 0.08 16 13 N -0.69 3.25 5.26 -443.64 -2.33 0.92 16 14 C 0.59 1.78 7.80 86.56 0.68 2.46 16 15 O -0.56 -6.59 16.44 -4.17 -0.07 -6.66 16 16 C 0.01 0.02 6.96 39.91 0.28 0.30 16 17 C -0.12 -0.45 10.53 22.55 0.24 -0.22 16 18 C -0.14 -0.33 6.16 -21.36 -0.13 -0.46 16 19 C -0.06 0.03 10.06 22.30 0.22 0.25 16 20 C -0.15 0.34 8.59 22.02 0.19 0.53 16 21 C -0.09 0.17 5.40 -19.83 -0.11 0.06 16 22 C -0.08 0.23 2.81 71.24 0.20 0.43 16 23 O -0.55 -0.04 12.76 -148.98 -1.90 -1.94 16 24 Si 0.77 -2.58 29.75 68.60 2.04 -0.54 16 25 C -0.11 0.15 9.61 22.37 0.22 0.37 16 26 C 0.11 0.01 7.25 39.13 0.28 0.30 16 27 N -0.56 2.03 6.07 -177.19 -1.08 0.95 16 28 C -0.13 1.00 7.29 31.12 0.23 1.22 16 29 C -0.08 0.41 9.70 22.26 0.22 0.62 16 30 C -0.18 0.38 9.04 22.36 0.20 0.58 16 31 H 0.07 -0.47 7.66 -2.38 -0.02 -0.49 16 32 H 0.11 -0.68 8.14 -2.39 -0.02 -0.70 16 33 H 0.07 -0.46 7.66 -2.39 -0.02 -0.48 16 34 H 0.15 -0.24 6.68 -2.91 -0.02 -0.26 16 35 H 0.09 -0.35 6.33 -2.39 -0.02 -0.37 16 36 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 37 H 0.41 -4.75 7.76 -92.71 -0.72 -5.47 16 38 H 0.15 0.57 8.06 -2.91 -0.02 0.55 16 39 H 0.15 -0.61 8.06 -2.91 -0.02 -0.63 16 40 H 0.15 -0.90 4.82 -2.91 -0.01 -0.91 16 41 H 0.13 -0.64 7.96 -2.39 -0.02 -0.66 16 42 H 0.39 -1.92 8.70 -74.06 -0.64 -2.56 16 43 H -0.28 -0.21 7.11 99.48 0.71 0.49 16 44 H -0.31 -1.43 7.11 99.48 0.71 -0.72 16 45 H 0.14 -0.53 8.06 -2.91 -0.02 -0.55 16 46 H 0.43 -4.66 8.12 -92.72 -0.75 -5.41 16 47 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 48 H 0.10 -0.67 7.72 -2.38 -0.02 -0.69 16 49 H 0.16 -1.89 8.05 -2.91 -0.02 -1.91 16 50 H 0.16 -1.15 6.30 -2.92 -0.02 -1.17 16 Total: 0.00 -26.33 418.18 0.04 -26.29 By element: Atomic # 1 Polarization: -23.68 SS G_CDS: -1.03 Total: -24.71 kcal Atomic # 6 Polarization: 5.20 SS G_CDS: 4.60 Total: 9.80 kcal Atomic # 7 Polarization: 5.28 SS G_CDS: -3.41 Total: 1.87 kcal Atomic # 8 Polarization: -8.74 SS G_CDS: -2.93 Total: -11.67 kcal Atomic # 9 Polarization: -1.80 SS G_CDS: 0.77 Total: -1.03 kcal Atomic # 14 Polarization: -2.58 SS G_CDS: 2.04 Total: -0.54 kcal Total: -26.33 0.04 -26.29 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13158378.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -0.221 kcal (2) G-P(sol) polarization free energy of solvation -26.328 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -26.549 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.040 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.288 kcal (6) G-S(sol) free energy of system = (1) + (5) -26.509 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds