Wall clock time and date at job start Tue Mar 9 2021 12:58:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35955 * 116.99840 * 2 1 4 4 C 1.38909 * 120.06100 * 179.97438 * 3 2 1 5 5 F 1.35103 * 120.04729 * 0.04542 * 4 3 2 6 6 C 1.38327 * 119.90368 * 179.76421 * 4 3 2 7 7 C 1.38256 * 120.02731 * 0.51172 * 6 4 3 8 8 C 1.50711 * 119.93303 * 179.76356 * 7 6 4 9 9 H 1.08997 * 112.84387 * 168.52621 * 8 7 6 10 10 C 1.53776 * 113.61587 * 299.72189 * 8 7 6 11 11 C 1.53778 * 87.08110 * 139.98341 * 10 8 7 12 12 H 1.08998 * 113.61522 * 219.93738 * 11 10 8 13 13 N 1.46498 * 113.61583 * 89.11426 * 11 10 8 14 14 C 1.34771 * 120.00080 * 155.00016 * 13 11 10 15 15 O 1.21582 * 120.00161 * 0.02562 * 14 13 11 16 16 C 1.47656 * 120.00439 * 180.02562 * 14 13 11 17 17 C 1.40172 * 119.96938 * 359.97438 * 16 14 13 18 18 C 1.36348 * 120.67098 * 179.97438 * 17 16 14 19 19 C 1.39333 * 120.23505 * 0.02562 * 18 17 16 20 20 N 1.37405 * 133.25332 * 180.29145 * 19 18 17 21 21 C 1.36859 * 109.98202 * 180.11035 * 20 19 18 22 22 C 1.34191 * 109.96576 * 359.61204 * 21 20 19 23 23 C 1.50704 * 126.53795 * 180.25597 * 22 21 20 24 24 O 1.42898 * 109.47438 * 104.97625 * 23 22 21 25 25 Si 1.86293 * 109.47259 * 344.97287 * 23 22 21 26 26 C 1.40910 * 119.64115 * 0.02562 * 19 18 17 27 27 C 1.39185 * 119.97980 * 179.97438 * 16 14 13 28 28 C 1.53778 * 113.61341 * 37.22214 * 8 7 6 29 29 C 1.38259 * 120.13010 * 359.49022 * 7 6 4 30 30 C 1.38186 * 120.08920 * 0.25184 * 29 7 6 31 31 H 1.09003 * 109.47143 * 180.02562 * 1 2 3 32 32 H 1.09006 * 109.47402 * 299.99655 * 1 2 3 33 33 H 1.08993 * 109.47382 * 60.00173 * 1 2 3 34 34 H 1.08001 * 119.98971 * 180.27273 * 6 4 3 35 35 H 1.09000 * 113.61397 * 25.43549 * 10 8 7 36 36 H 1.08995 * 113.69243 * 254.54407 * 10 8 7 37 37 H 0.96997 * 120.00233 * 335.00383 * 13 11 10 38 38 H 1.08002 * 119.66695 * 0.02969 * 17 16 14 39 39 H 1.07997 * 119.88329 * 179.97438 * 18 17 16 40 40 H 0.97003 * 125.00740 * 359.94940 * 20 19 18 41 41 H 1.08002 * 125.01908 * 179.88593 * 21 20 19 42 42 H 1.09005 * 109.46575 * 224.97232 * 23 22 21 43 43 H 0.96702 * 113.99873 * 179.97438 * 24 23 22 44 44 H 1.48505 * 110.00122 * 60.00165 * 25 23 22 45 45 H 1.48501 * 110.00369 * 181.32122 * 25 23 22 46 46 H 1.08007 * 120.29680 * 0.04643 * 27 16 14 47 47 H 1.09006 * 113.61382 * 105.46727 * 28 8 7 48 48 H 1.08990 * 113.61602 * 334.56453 * 28 8 7 49 49 H 1.07990 * 119.95578 * 180.28056 * 29 7 6 50 50 H 1.08000 * 120.01073 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1539 0.0001 6 6 4.0579 2.5198 -0.0044 7 6 3.3022 3.6776 0.0008 8 6 3.9850 5.0212 0.0008 9 1 3.2983 5.8448 -0.1947 10 6 4.8916 5.2516 1.2214 11 6 5.8864 5.9197 0.2577 12 1 6.9278 5.6744 0.4659 13 7 5.6635 7.3577 0.0881 14 6 6.6823 8.1584 -0.2824 15 8 7.7862 7.6873 -0.4764 16 6 6.4579 9.6078 -0.4528 17 6 5.1848 10.1503 -0.2296 18 6 4.9617 11.4867 -0.3822 19 6 6.0011 12.3324 -0.7641 20 7 6.0800 13.6860 -0.9871 21 6 7.3541 14.0262 -1.3531 22 6 8.1326 12.9333 -1.3722 23 6 9.5985 12.8820 -1.7180 24 8 10.3643 12.7148 -0.5232 25 14 10.0948 14.4697 -2.5566 26 6 7.2852 11.7992 -0.9926 27 6 7.5105 10.4344 -0.8350 28 6 5.2610 5.0638 -0.8564 29 6 1.9216 3.6053 0.0004 30 6 1.2923 2.3750 -0.0001 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3634 0.5138 0.8900 33 1 -0.3634 0.5138 -0.8899 34 1 5.1362 2.5791 -0.0084 35 1 5.2668 4.3301 1.6666 36 1 4.4698 5.9360 1.9573 37 1 4.7828 7.7335 0.2425 38 1 4.3726 9.5033 0.0673 39 1 3.9757 11.8910 -0.2073 40 1 5.3409 14.3082 -0.9004 41 1 7.6853 15.0271 -1.5872 42 1 9.7843 12.0432 -2.3890 43 1 11.3191 12.6730 -0.6706 44 1 9.8463 15.6211 -1.6521 45 1 11.5308 14.4190 -2.9313 46 1 8.4929 10.0205 -1.0088 47 1 5.1362 5.5971 -1.7989 48 1 5.7371 4.0911 -0.9792 49 1 1.3341 4.5114 -0.0001 50 1 0.2137 2.3200 0.0000 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13287722.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:24 Heat of formation + Delta-G solvation = -27.108307 kcal Electronic energy + Delta-G solvation = -35131.993772 eV Core-core repulsion = 30200.169297 eV Total energy + Delta-G solvation = -4931.824476 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.152 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -49.87456 -42.44715 -41.64223 -40.88121 -39.81108 -38.06976 -37.87888 -37.43630 -34.51837 -33.36515 -31.74986 -31.47106 -30.76427 -30.31081 -28.46464 -26.67650 -26.44928 -26.07795 -24.66658 -23.81328 -23.45193 -22.59895 -21.72848 -20.59973 -20.25215 -19.39512 -19.06983 -18.54081 -18.47382 -17.93651 -17.78311 -17.31159 -17.18687 -17.04548 -16.29671 -16.08972 -16.01532 -15.95659 -15.80343 -15.65017 -15.35725 -15.21806 -15.03174 -14.88206 -14.78087 -14.67956 -14.13173 -14.11398 -13.94488 -13.73097 -13.56723 -13.45917 -13.42486 -13.09442 -12.85683 -12.78235 -12.57456 -12.20606 -12.15659 -12.13408 -12.00730 -11.81361 -11.45473 -11.21583 -11.08572 -10.77921 -10.37421 -10.13774 -9.94318 -9.31519 -9.11284 -8.80275 -4.88367 -0.14287 0.10540 0.17842 0.22410 1.33898 1.49311 1.64193 1.84236 1.97384 2.06471 2.12470 2.19120 2.48299 2.89215 3.18729 3.47518 3.53532 3.63951 3.66727 3.70983 3.73967 3.76777 3.82018 3.94681 4.00321 4.03914 4.15095 4.21865 4.27168 4.28374 4.34415 4.35071 4.43600 4.51739 4.55628 4.60160 4.66695 4.69836 4.79304 4.79808 4.87578 4.90322 4.92975 5.02046 5.04980 5.09511 5.13053 5.22020 5.29275 5.36374 5.46804 5.52099 5.58208 5.64044 5.67500 5.99587 6.27173 6.52897 6.59273 6.63321 7.20812 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.074 3.926 4 C 0.033 3.967 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.079 4.079 8 C -0.055 4.055 9 H 0.129 0.871 10 C -0.126 4.126 11 C 0.112 3.888 12 H 0.079 0.921 13 N -0.691 5.691 14 C 0.563 3.437 15 O -0.589 6.589 16 C -0.179 4.179 17 C -0.064 4.064 18 C -0.124 4.124 19 C 0.111 3.889 20 N -0.571 5.571 21 C 0.079 3.921 22 C -0.183 4.183 23 C -0.065 4.065 24 O -0.564 6.564 25 Si 0.785 3.215 26 C -0.130 4.130 27 C -0.021 4.021 28 C -0.146 4.146 29 C -0.076 4.076 30 C -0.179 4.179 31 H 0.113 0.887 32 H 0.072 0.928 33 H 0.071 0.929 34 H 0.147 0.853 35 H 0.096 0.904 36 H 0.095 0.905 37 H 0.417 0.583 38 H 0.165 0.835 39 H 0.164 0.836 40 H 0.439 0.561 41 H 0.205 0.795 42 H 0.069 0.931 43 H 0.389 0.611 44 H -0.277 1.277 45 H -0.293 1.293 46 H 0.108 0.892 47 H 0.072 0.928 48 H 0.091 0.909 49 H 0.166 0.834 50 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.749 8.153 -1.661 13.593 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.028 3.972 4 C 0.014 3.986 5 F -0.133 7.133 6 C -0.134 4.134 7 C -0.080 4.080 8 C -0.073 4.073 9 H 0.147 0.853 10 C -0.164 4.164 11 C 0.006 3.994 12 H 0.098 0.902 13 N -0.343 5.343 14 C 0.353 3.647 15 O -0.470 6.470 16 C -0.183 4.183 17 C -0.084 4.084 18 C -0.144 4.144 19 C 0.001 3.999 20 N -0.175 5.175 21 C -0.049 4.049 22 C -0.190 4.190 23 C -0.173 4.173 24 O -0.374 6.374 25 Si 0.687 3.313 26 C -0.134 4.134 27 C -0.041 4.041 28 C -0.185 4.185 29 C -0.093 4.093 30 C -0.197 4.197 31 H 0.131 0.869 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.165 0.835 35 H 0.114 0.886 36 H 0.113 0.887 37 H 0.256 0.744 38 H 0.182 0.818 39 H 0.182 0.818 40 H 0.281 0.719 41 H 0.221 0.779 42 H 0.087 0.913 43 H 0.239 0.761 44 H -0.204 1.204 45 H -0.220 1.220 46 H 0.126 0.874 47 H 0.090 0.910 48 H 0.109 0.891 49 H 0.183 0.817 50 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -10.070 8.378 -1.486 13.184 hybrid contribution 0.949 -0.980 0.769 1.567 sum -9.121 7.397 -0.717 11.766 Atomic orbital electron populations 1.23406 0.75727 1.05708 1.02803 1.86109 1.24111 1.26537 1.88814 1.19326 0.90863 0.86607 1.00374 1.17423 0.86731 0.83148 1.11338 1.91451 1.76924 1.50208 1.94674 1.21014 1.01637 0.89582 1.01209 1.19613 0.93516 0.94088 1.00763 1.21577 0.95200 0.93940 0.96561 0.85340 1.23394 0.95154 1.01505 0.96334 1.21862 1.00063 0.79693 0.97746 0.90235 1.45366 1.12852 1.06999 1.69127 1.18468 0.83905 0.86804 0.75507 1.90766 1.26040 1.77246 1.52962 1.19566 0.95947 0.92016 1.10763 1.20908 0.95074 0.95220 0.97209 1.20084 0.98415 0.92172 1.03745 1.18678 0.95431 0.84770 1.00978 1.41724 1.11309 1.06138 1.58298 1.22069 0.83508 0.99605 0.99682 1.19822 0.94127 0.92316 1.12727 1.24552 0.89400 1.12534 0.90786 1.86585 1.22942 1.95485 1.32349 0.94130 0.80919 0.72609 0.83629 1.19188 0.94217 0.93161 1.06866 1.20580 0.98154 0.91525 0.93817 1.23579 0.96313 1.00548 0.98059 1.21325 0.93747 0.98153 0.96108 1.21471 1.01512 0.90845 1.05876 0.86858 0.90968 0.91023 0.83541 0.88587 0.88654 0.74404 0.81756 0.81827 0.71924 0.77868 0.91270 0.76096 1.20363 1.22034 0.87426 0.90962 0.89106 0.81650 0.82069 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.33 10.36 -93.05 -0.96 -3.29 16 3 C 0.07 0.41 6.69 22.53 0.15 0.56 16 4 C 0.03 0.26 7.31 22.45 0.16 0.43 16 5 F -0.15 -2.00 17.11 44.97 0.77 -1.23 16 6 C -0.12 -0.27 8.59 22.30 0.19 -0.08 16 7 C -0.08 0.20 5.29 -19.85 -0.11 0.09 16 8 C -0.05 0.35 3.86 -11.01 -0.04 0.30 16 9 H 0.13 -1.45 8.09 -2.39 -0.02 -1.47 16 10 C -0.13 0.67 7.29 31.12 0.23 0.89 16 11 C 0.11 -0.02 4.32 45.52 0.20 0.18 16 12 H 0.08 0.46 7.46 -2.39 -0.02 0.44 16 13 N -0.69 0.51 5.21 -443.09 -2.31 -1.80 16 14 C 0.56 4.55 7.76 86.73 0.67 5.23 16 15 O -0.59 -10.53 15.93 -3.97 -0.06 -10.60 16 16 C -0.18 -1.00 5.87 -20.09 -0.12 -1.12 16 17 C -0.06 0.18 9.46 22.30 0.21 0.39 16 18 C -0.12 0.46 10.00 22.09 0.22 0.68 16 19 C 0.11 0.09 7.27 39.19 0.28 0.37 16 20 N -0.57 2.54 6.05 -187.48 -1.13 1.41 16 21 C 0.08 -0.18 10.43 82.98 0.87 0.69 16 22 C -0.18 -0.79 5.61 -18.61 -0.10 -0.89 16 23 C -0.07 -0.20 3.05 71.24 0.22 0.02 16 24 O -0.56 -3.94 12.86 -148.98 -1.92 -5.86 16 25 Si 0.78 -2.04 30.80 68.60 2.11 0.08 16 26 C -0.13 -0.92 6.34 -20.21 -0.13 -1.05 16 27 C -0.02 -0.21 9.64 22.73 0.22 0.01 16 28 C -0.15 0.27 7.25 31.12 0.23 0.49 16 29 C -0.08 0.34 9.70 22.26 0.22 0.56 16 30 C -0.18 0.28 9.04 22.36 0.20 0.48 16 31 H 0.11 -0.64 8.14 -2.39 -0.02 -0.66 16 32 H 0.07 -0.45 7.66 -2.38 -0.02 -0.47 16 33 H 0.07 -0.44 7.66 -2.39 -0.02 -0.46 16 34 H 0.15 0.08 6.63 -2.91 -0.02 0.06 16 35 H 0.10 -0.39 7.73 -2.39 -0.02 -0.41 16 36 H 0.09 -0.77 8.14 -2.39 -0.02 -0.78 16 37 H 0.42 -3.49 6.70 -92.71 -0.62 -4.11 16 38 H 0.17 -1.84 6.36 -2.91 -0.02 -1.86 16 39 H 0.16 -1.80 8.06 -2.91 -0.02 -1.82 16 40 H 0.44 -5.24 8.96 -92.71 -0.83 -6.07 16 41 H 0.20 -1.77 6.30 -2.91 -0.02 -1.78 16 42 H 0.07 0.18 7.96 -2.38 -0.02 0.16 16 43 H 0.39 -0.36 8.74 -74.06 -0.65 -1.01 16 44 H -0.28 -0.31 7.04 99.48 0.70 0.39 16 45 H -0.29 -0.82 7.11 99.48 0.71 -0.11 16 46 H 0.11 1.54 7.64 -2.91 -0.02 1.52 16 47 H 0.07 -0.03 8.14 -2.38 -0.02 -0.05 16 48 H 0.09 -0.07 6.29 -2.39 -0.02 -0.09 16 49 H 0.17 -1.85 8.05 -2.92 -0.02 -1.88 16 50 H 0.16 -1.11 6.30 -2.91 -0.02 -1.13 16 Total: 0.00 -33.95 418.12 0.36 -33.60 By element: Atomic # 1 Polarization: -20.57 SS G_CDS: -1.02 Total: -21.59 kcal Atomic # 6 Polarization: 4.41 SS G_CDS: 4.88 Total: 9.29 kcal Atomic # 7 Polarization: 3.05 SS G_CDS: -3.44 Total: -0.40 kcal Atomic # 8 Polarization: -16.81 SS G_CDS: -2.94 Total: -19.75 kcal Atomic # 9 Polarization: -2.00 SS G_CDS: 0.77 Total: -1.23 kcal Atomic # 14 Polarization: -2.04 SS G_CDS: 2.11 Total: 0.08 kcal Total: -33.95 0.36 -33.60 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13287722.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 6.487 kcal (2) G-P(sol) polarization free energy of solvation -33.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.464 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.356 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.595 kcal (6) G-S(sol) free energy of system = (1) + (5) -27.108 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds