Wall clock time and date at job start Tue Mar 9 2021 12:58:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35954 * 116.99923 * 2 1 4 4 C 1.38902 * 120.06195 * 180.02562 * 3 2 1 5 5 F 1.35097 * 120.05226 * 359.97438 * 4 3 2 6 6 C 1.38336 * 119.90504 * 179.97438 * 4 3 2 7 7 C 1.38259 * 120.03006 * 0.02562 * 6 4 3 8 8 C 1.50690 * 119.94078 * 179.97438 * 7 6 4 9 9 H 1.09000 * 112.90879 * 348.75397 * 8 7 6 10 10 C 1.53786 * 113.61518 * 120.00049 * 8 7 6 11 11 C 1.53781 * 87.17350 * 140.02616 * 10 8 7 12 12 H 1.09000 * 113.61379 * 219.89528 * 11 10 8 13 13 N 1.46505 * 113.61334 * 89.07333 * 11 10 8 14 14 C 1.34776 * 119.99597 * 154.99978 * 13 11 10 15 15 O 1.21512 * 120.00257 * 0.02562 * 14 13 11 16 16 C 1.48168 * 119.99563 * 180.02562 * 14 13 11 17 17 N 1.32714 * 119.72654 * 359.72214 * 16 14 13 18 18 C 1.31529 * 121.64372 * 179.75382 * 17 16 14 19 19 C 1.38560 * 120.90141 * 0.52790 * 18 17 16 20 20 C 1.50695 * 120.32333 * 179.71709 * 19 18 17 21 21 O 1.42898 * 109.47667 * 245.02710 * 20 19 18 22 22 Si 1.86302 * 109.47148 * 5.02486 * 20 19 18 23 23 C 1.38620 * 119.35221 * 359.74299 * 19 18 17 24 24 C 1.38593 * 118.49143 * 359.97438 * 23 19 18 25 25 C 1.53781 * 87.08070 * 334.52830 * 11 10 8 26 26 C 1.38265 * 120.12225 * 0.23792 * 7 6 4 27 27 C 1.38177 * 120.09719 * 359.48581 * 26 7 6 28 28 H 1.09001 * 109.47151 * 180.02562 * 1 2 3 29 29 H 1.09001 * 109.47440 * 299.99957 * 1 2 3 30 30 H 1.08999 * 109.47085 * 60.00384 * 1 2 3 31 31 H 1.08001 * 119.98796 * 179.97438 * 6 4 3 32 32 H 1.09002 * 113.61357 * 25.43533 * 10 8 7 33 33 H 1.09002 * 113.61608 * 254.61695 * 10 8 7 34 34 H 0.96995 * 120.00170 * 335.00476 * 13 11 10 35 35 H 1.07999 * 119.54933 * 180.27121 * 18 17 16 36 36 H 1.09001 * 109.47042 * 125.01819 * 20 19 18 37 37 H 0.96694 * 114.00285 * 180.02562 * 21 20 19 38 38 H 1.48496 * 110.00000 * 299.99894 * 22 20 19 39 39 H 1.48503 * 109.99841 * 61.31521 * 22 20 19 40 40 H 1.08000 * 120.75794 * 179.97438 * 23 19 18 41 41 H 1.08001 * 120.47034 * 180.02562 * 24 23 19 42 42 H 1.09005 * 113.61471 * 139.98321 * 25 11 10 43 43 H 1.08996 * 113.61178 * 270.79663 * 25 11 10 44 44 H 1.08000 * 119.95269 * 179.72482 * 26 7 6 45 45 H 1.07998 * 120.02017 * 180.28106 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4332 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0005 6 6 4.0579 2.5199 -0.0011 7 6 3.3023 3.6777 -0.0005 8 6 3.9848 5.0212 -0.0005 9 1 5.0550 4.9534 0.1948 10 6 3.6352 5.8898 -1.2205 11 6 3.5896 7.0886 -0.2584 12 1 2.7779 7.7854 -0.4672 13 7 4.8831 7.7557 -0.0902 14 6 4.9302 9.0511 0.2786 15 8 3.8999 9.6657 0.4721 16 6 6.2384 9.7260 0.4480 17 7 7.3603 9.0481 0.2406 18 6 8.5415 9.6107 0.3755 19 6 8.6581 10.9390 0.7525 20 6 10.0181 11.5687 0.9094 21 8 10.2230 11.9255 2.2778 22 14 11.3291 10.3550 0.3811 23 6 7.5115 11.6826 0.9844 24 6 6.2804 11.0653 0.8290 25 6 3.2669 6.0805 0.8572 26 6 1.9216 3.6053 0.0055 27 6 1.2922 2.3751 0.0003 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5138 -0.8900 31 1 5.1363 2.5792 -0.0011 32 1 2.6694 5.6497 -1.6651 33 1 4.4365 5.9512 -1.9569 34 1 5.7055 7.2651 -0.2444 35 1 9.4327 9.0284 0.1940 36 1 10.0786 12.4622 0.2879 37 1 11.0800 12.3376 2.4528 38 1 11.2572 9.1323 1.2208 39 1 11.1462 10.0004 -1.0493 40 1 7.5760 12.7195 1.2796 41 1 5.3666 11.6147 1.0010 42 1 3.7718 6.2951 1.7991 43 1 2.2003 5.8937 0.9817 44 1 1.3340 4.5114 0.0104 45 1 0.2137 2.3200 0.0004 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13287726.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:27 Heat of formation + Delta-G solvation = -47.831452 kcal Electronic energy + Delta-G solvation = -30266.590420 eV Core-core repulsion = 25745.857221 eV Total energy + Delta-G solvation = -4520.733199 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.137 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -49.91160 -42.10769 -41.47448 -40.70976 -39.66034 -38.00647 -37.77436 -34.82762 -33.74638 -33.13803 -31.88055 -31.22220 -28.54008 -27.90425 -26.72851 -25.88975 -25.17755 -24.12109 -23.69386 -22.66223 -22.07216 -20.35635 -19.54175 -19.31461 -18.56483 -18.25292 -18.05846 -17.62832 -17.22175 -17.03447 -16.84178 -16.51266 -16.38311 -16.16047 -16.12062 -15.74101 -15.64904 -15.32745 -15.23850 -14.92886 -14.78492 -14.40297 -14.13172 -14.01988 -13.96754 -13.74711 -13.66681 -13.42696 -13.11801 -13.00996 -12.52918 -12.39597 -12.24259 -12.13624 -11.90069 -11.61705 -11.52357 -11.32431 -11.16509 -10.91883 -10.57945 -10.27911 -10.13375 -10.00154 -9.15731 -4.95763 -0.71843 -0.07131 0.05058 0.13173 1.24849 1.40975 1.65904 1.82961 1.94300 2.15323 2.42676 2.51141 2.77249 3.13593 3.24575 3.39986 3.45009 3.54394 3.58436 3.65913 3.73185 3.73915 3.85273 3.89723 3.99882 4.11488 4.11909 4.18644 4.30824 4.31103 4.32473 4.47767 4.47876 4.55292 4.67105 4.71504 4.74581 4.80644 4.83416 4.86765 4.88908 4.97948 5.03023 5.10264 5.13799 5.24536 5.38393 5.55998 5.60092 6.14493 6.22967 6.45967 6.87289 6.93634 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.340 6.340 3 C 0.076 3.924 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.115 4.115 7 C -0.078 4.078 8 C -0.065 4.065 9 H 0.104 0.896 10 C -0.123 4.123 11 C 0.110 3.890 12 H 0.099 0.901 13 N -0.685 5.685 14 C 0.574 3.426 15 O -0.559 6.559 16 C 0.059 3.941 17 N -0.462 5.462 18 C 0.082 3.918 19 C -0.109 4.109 20 C -0.075 4.075 21 O -0.562 6.562 22 Si 0.770 3.230 23 C -0.049 4.049 24 C -0.111 4.111 25 C -0.139 4.139 26 C -0.080 4.080 27 C -0.176 4.176 28 H 0.115 0.885 29 H 0.071 0.929 30 H 0.072 0.928 31 H 0.150 0.850 32 H 0.113 0.887 33 H 0.082 0.918 34 H 0.417 0.583 35 H 0.160 0.840 36 H 0.110 0.890 37 H 0.408 0.592 38 H -0.292 1.292 39 H -0.283 1.283 40 H 0.173 0.827 41 H 0.159 0.841 42 H 0.065 0.935 43 H 0.111 0.889 44 H 0.160 0.840 45 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.889 5.454 -1.138 6.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.254 6.254 3 C 0.030 3.970 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.133 4.133 7 C -0.078 4.078 8 C -0.083 4.083 9 H 0.122 0.878 10 C -0.161 4.161 11 C 0.005 3.995 12 H 0.117 0.883 13 N -0.335 5.335 14 C 0.360 3.640 15 O -0.437 6.437 16 C -0.079 4.079 17 N -0.173 5.173 18 C -0.078 4.078 19 C -0.112 4.112 20 C -0.186 4.186 21 O -0.373 6.373 22 Si 0.676 3.324 23 C -0.075 4.075 24 C -0.131 4.131 25 C -0.177 4.177 26 C -0.098 4.098 27 C -0.194 4.194 28 H 0.133 0.867 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.168 0.832 32 H 0.132 0.868 33 H 0.101 0.899 34 H 0.255 0.745 35 H 0.177 0.823 36 H 0.127 0.873 37 H 0.260 0.740 38 H -0.219 1.219 39 H -0.210 1.210 40 H 0.191 0.809 41 H 0.176 0.824 42 H 0.083 0.917 43 H 0.129 0.871 44 H 0.178 0.822 45 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 1.723 3.696 -1.512 4.349 hybrid contribution -0.066 0.163 0.247 0.303 sum 1.657 3.859 -1.266 4.386 Atomic orbital electron populations 1.23415 0.75707 1.05780 1.02783 1.86111 1.24111 1.26391 1.88770 1.19307 0.90877 0.86570 1.00265 1.17408 0.86706 0.83156 1.11186 1.91451 1.76864 1.50113 1.94645 1.21091 1.01711 0.89458 1.01070 1.19552 0.93558 0.93864 1.00871 1.21578 0.99940 0.89182 0.97601 0.87796 1.23414 1.04497 0.92287 0.95911 1.22026 0.85639 0.93960 0.97914 0.88293 1.45512 1.10281 1.10329 1.67380 1.17954 0.87126 0.82352 0.76592 1.90785 1.34747 1.65999 1.52190 1.21195 0.92114 0.93053 1.01506 1.67430 0.98163 1.38642 1.13050 1.22685 0.95052 0.92644 0.97407 1.21022 0.97176 0.94527 0.98429 1.24734 0.97691 1.07639 0.88530 1.86432 1.43811 1.83795 1.23238 0.93993 0.85002 0.77065 0.76370 1.21843 0.89971 1.02090 0.93550 1.22395 1.00621 0.94207 0.95906 1.23634 1.02474 0.94196 0.97419 1.21214 0.93901 0.98033 0.96624 1.21439 1.01524 0.90704 1.05755 0.86717 0.91089 0.90981 0.83198 0.86837 0.89897 0.74511 0.82343 0.87281 0.73954 1.21943 1.21001 0.80917 0.82362 0.91656 0.87072 0.82249 0.82020 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 2 O -0.34 -2.46 10.36 -93.03 -0.96 -3.42 16 3 C 0.08 0.47 6.69 22.53 0.15 0.62 16 4 C 0.04 0.29 7.31 22.45 0.16 0.46 16 5 F -0.15 -1.98 17.11 44.97 0.77 -1.21 16 6 C -0.11 -0.37 9.68 22.30 0.22 -0.15 16 7 C -0.08 0.05 5.29 -19.86 -0.11 -0.06 16 8 C -0.06 0.22 3.86 -10.92 -0.04 0.18 16 9 H 0.10 -0.39 8.09 -2.39 -0.02 -0.41 16 10 C -0.12 0.56 7.28 31.12 0.23 0.78 16 11 C 0.11 -0.06 4.32 45.52 0.20 0.13 16 12 H 0.10 0.19 7.46 -2.39 -0.02 0.17 16 13 N -0.68 -1.69 5.25 -442.59 -2.32 -4.01 16 14 C 0.57 4.54 7.81 86.88 0.68 5.22 16 15 O -0.56 -7.42 15.92 -3.75 -0.06 -7.48 16 16 C 0.06 0.40 6.75 41.91 0.28 0.68 16 17 N -0.46 -2.90 9.54 -184.91 -1.76 -4.66 16 18 C 0.08 0.34 9.84 84.82 0.83 1.18 16 19 C -0.11 -0.14 5.40 -19.70 -0.11 -0.25 16 20 C -0.08 0.39 2.81 71.23 0.20 0.59 16 21 O -0.56 2.62 12.82 -148.98 -1.91 0.71 16 22 Si 0.77 -4.48 29.87 68.60 2.05 -2.43 16 23 C -0.05 -0.03 9.83 22.45 0.22 0.19 16 24 C -0.11 -0.44 9.63 22.61 0.22 -0.22 16 25 C -0.14 0.33 7.26 31.21 0.23 0.55 16 26 C -0.08 0.19 8.62 22.26 0.19 0.38 16 27 C -0.18 0.04 9.04 22.36 0.20 0.24 16 28 H 0.11 -0.60 8.14 -2.39 -0.02 -0.62 16 29 H 0.07 -0.38 7.66 -2.39 -0.02 -0.40 16 30 H 0.07 -0.40 7.66 -2.39 -0.02 -0.42 16 31 H 0.15 0.05 8.05 -2.91 -0.02 0.03 16 32 H 0.11 -0.75 7.73 -2.39 -0.02 -0.77 16 33 H 0.08 -0.38 8.14 -2.39 -0.02 -0.40 16 34 H 0.42 0.09 8.03 -92.71 -0.74 -0.65 16 35 H 0.16 0.35 4.88 -2.91 -0.01 0.34 16 36 H 0.11 -1.11 7.96 -2.39 -0.02 -1.13 16 37 H 0.41 -6.13 8.74 -74.06 -0.65 -6.78 16 38 H -0.29 -0.52 7.05 99.48 0.70 0.19 16 39 H -0.28 0.10 7.11 99.48 0.71 0.81 16 40 H 0.17 -0.80 8.06 -2.91 -0.02 -0.83 16 41 H 0.16 0.42 7.64 -2.91 -0.02 0.39 16 42 H 0.06 0.04 8.14 -2.38 -0.02 0.02 16 43 H 0.11 -0.56 6.31 -2.39 -0.02 -0.58 16 44 H 0.16 -1.23 6.64 -2.91 -0.02 -1.25 16 45 H 0.16 -0.90 6.30 -2.91 -0.02 -0.92 16 Total: 0.00 -24.47 381.95 0.38 -24.10 By element: Atomic # 1 Polarization: -12.91 SS G_CDS: -0.29 Total: -13.20 kcal Atomic # 6 Polarization: 6.74 SS G_CDS: 4.87 Total: 11.61 kcal Atomic # 7 Polarization: -4.58 SS G_CDS: -4.09 Total: -8.67 kcal Atomic # 8 Polarization: -7.26 SS G_CDS: -2.93 Total: -10.19 kcal Atomic # 9 Polarization: -1.98 SS G_CDS: 0.77 Total: -1.21 kcal Atomic # 14 Polarization: -4.48 SS G_CDS: 2.05 Total: -2.43 kcal Total: -24.47 0.38 -24.10 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13287726.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -23.733 kcal (2) G-P(sol) polarization free energy of solvation -24.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.375 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.099 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.831 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds