Wall clock time and date at job start Tue Mar 9 2021 12:58:31 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35954 * 117.00262 * 2 1 4 4 C 1.38900 * 120.06597 * 179.97438 * 3 2 1 5 5 F 1.35102 * 120.04595 * 0.02562 * 4 3 2 6 6 C 1.38331 * 119.90865 * 179.97438 * 4 3 2 7 7 C 1.38262 * 120.02871 * 0.02562 * 6 4 3 8 8 C 1.50700 * 119.93429 * 179.97438 * 7 6 4 9 9 H 1.09000 * 112.85087 * 348.79842 * 8 7 6 10 10 C 1.53777 * 113.61179 * 120.00234 * 8 7 6 11 11 C 1.53785 * 87.08273 * 140.06265 * 10 8 7 12 12 H 1.08999 * 113.61101 * 219.93586 * 11 10 8 13 13 N 1.46494 * 113.61419 * 89.11122 * 11 10 8 14 14 C 1.34784 * 119.99635 * 156.53238 * 13 11 10 15 15 O 1.21623 * 120.00016 * 0.02562 * 14 13 11 16 16 C 1.47265 * 119.99864 * 179.97438 * 14 13 11 17 17 C 1.36768 * 126.94165 * 0.03260 * 16 14 13 18 18 N 1.34656 * 108.39851 * 179.97438 * 17 16 14 19 19 C 1.46502 * 124.85580 * 180.02562 * 18 17 16 20 20 C 1.36451 * 110.29570 * 359.97438 * 18 17 16 21 21 C 1.50702 * 125.57091 * 179.97438 * 20 18 17 22 22 O 1.42897 * 109.46925 * 30.00372 * 21 20 18 23 23 Si 1.86300 * 109.46944 * 150.00043 * 21 20 18 24 24 C 1.34484 * 108.85593 * 359.75434 * 20 18 17 25 25 C 1.53784 * 87.16872 * 334.52316 * 11 10 8 26 26 C 1.38258 * 120.12096 * 0.23081 * 7 6 4 27 27 C 1.38178 * 120.09795 * 359.48769 * 26 7 6 28 28 H 1.09005 * 109.46473 * 60.00215 * 1 2 3 29 29 H 1.08994 * 109.46999 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47165 * 300.00405 * 1 2 3 31 31 H 1.07999 * 119.98757 * 180.02562 * 6 4 3 32 32 H 1.08998 * 113.61561 * 25.51231 * 10 8 7 33 33 H 1.08996 * 113.61028 * 254.60964 * 10 8 7 34 34 H 0.96995 * 120.00292 * 336.80671 * 13 11 10 35 35 H 1.08006 * 125.80219 * 359.97154 * 17 16 14 36 36 H 1.08996 * 109.47049 * 89.97201 * 19 18 17 37 37 H 1.08997 * 109.47422 * 209.97751 * 19 18 17 38 38 H 1.09007 * 109.46816 * 329.96911 * 19 18 17 39 39 H 1.08993 * 109.47414 * 270.00502 * 21 20 18 40 40 H 0.96700 * 114.00048 * 59.99627 * 22 21 20 41 41 H 1.48496 * 110.00090 * 179.97438 * 23 21 20 42 42 H 1.48501 * 110.00082 * 301.32455 * 23 21 20 43 43 H 1.07997 * 126.83636 * 180.25558 * 24 20 18 44 44 H 1.09002 * 113.61479 * 140.02467 * 25 11 10 45 45 H 1.09002 * 113.61836 * 270.92636 * 25 11 10 46 46 H 1.08003 * 119.94428 * 179.72229 * 26 7 6 47 47 H 1.08000 * 120.01389 * 180.23012 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2113 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1539 0.0005 6 6 4.0580 2.5198 0.0000 7 6 3.3024 3.6777 -0.0005 8 6 3.9852 5.0212 -0.0005 9 1 5.0553 4.9521 0.1950 10 6 3.6366 5.8892 -1.2211 11 6 3.5919 7.0871 -0.2578 12 1 2.7804 7.7845 -0.4656 13 7 4.8857 7.7534 -0.0895 14 6 4.9343 9.0397 0.3104 15 8 3.9040 9.6469 0.5321 16 6 6.2348 9.7094 0.4801 17 6 7.4725 9.1658 0.2724 18 7 8.3995 10.1059 0.5374 19 6 9.8471 9.9080 0.4306 20 6 7.7977 11.2697 0.9186 21 6 8.5107 12.5431 1.2946 22 8 9.7441 12.6277 0.5781 23 14 7.4399 14.0051 0.8626 24 6 6.4642 11.0962 0.8993 25 6 3.2680 6.0800 0.8583 26 6 1.9218 3.6052 0.0043 27 6 1.2924 2.3751 -0.0010 28 1 -0.3632 0.5138 -0.8901 29 1 -0.3633 -1.0276 0.0005 30 1 -0.3633 0.5139 0.8899 31 1 5.1364 2.5790 0.0000 32 1 2.6705 5.6500 -1.6654 33 1 4.4386 5.9502 -1.9567 34 1 5.7072 7.2702 -0.2698 35 1 7.6725 8.1544 -0.0495 36 1 10.1756 10.1648 -0.5765 37 1 10.3555 10.5469 1.1526 38 1 10.0873 8.8648 0.6362 39 1 8.7120 12.5440 2.3658 40 1 9.6409 12.6316 -0.3834 41 1 8.1315 15.2671 1.2291 42 1 7.1318 13.9974 -0.5901 43 1 5.7120 11.8309 1.1457 44 1 3.7725 6.2949 1.8004 45 1 2.2012 5.8928 0.9815 46 1 1.3344 4.5115 0.0084 47 1 0.2138 2.3201 -0.0010 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13287730.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:31 Heat of formation + Delta-G solvation = -38.495122 kcal Electronic energy + Delta-G solvation = -31049.028856 eV Core-core repulsion = 26501.389032 eV Total energy + Delta-G solvation = -4547.639823 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 361.152 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -49.86324 -42.44500 -41.51683 -40.66390 -39.43828 -37.92709 -37.79600 -34.42065 -33.64848 -31.85164 -31.58789 -30.88925 -28.42679 -27.59042 -26.61795 -26.41153 -25.63311 -24.04003 -23.59105 -22.50445 -21.04106 -20.63406 -20.15225 -19.39572 -19.03899 -18.04197 -17.61838 -17.43212 -17.18180 -17.10893 -16.78021 -16.65828 -16.24234 -16.08337 -15.81771 -15.67624 -15.48296 -15.38685 -15.26931 -15.12679 -14.69613 -14.44242 -14.07721 -14.03156 -13.67023 -13.62960 -13.40486 -13.32720 -13.17719 -13.13553 -12.98662 -12.95191 -12.40696 -12.33177 -12.15730 -12.00221 -11.78837 -11.43189 -11.20538 -10.97616 -10.93838 -10.04670 -9.94843 -9.54671 -9.18816 -9.10375 -4.88934 0.10139 0.18581 0.76673 1.04936 1.47136 1.63498 1.81552 2.06820 2.19170 2.29754 2.48000 2.58806 3.18776 3.21861 3.52377 3.58308 3.61899 3.78301 3.80020 3.89285 3.97302 4.01862 4.07715 4.20115 4.24859 4.31754 4.34285 4.34389 4.41834 4.48481 4.53000 4.54341 4.67815 4.71992 4.78803 4.84270 4.87686 4.91643 4.93969 4.98855 5.02820 5.07716 5.11912 5.19908 5.25459 5.51630 5.65391 5.66559 5.74462 5.98647 6.24666 6.26613 6.36009 6.69058 7.39434 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.112 4.112 7 C -0.078 4.078 8 C -0.060 4.060 9 H 0.114 0.886 10 C -0.124 4.124 11 C 0.116 3.884 12 H 0.084 0.916 13 N -0.700 5.700 14 C 0.591 3.409 15 O -0.591 6.591 16 C -0.261 4.261 17 C 0.071 3.929 18 N -0.427 5.427 19 C 0.062 3.938 20 C -0.024 4.024 21 C -0.043 4.043 22 O -0.541 6.541 23 Si 0.772 3.228 24 C -0.155 4.155 25 C -0.142 4.142 26 C -0.082 4.082 27 C -0.178 4.178 28 H 0.071 0.929 29 H 0.114 0.886 30 H 0.070 0.930 31 H 0.156 0.844 32 H 0.104 0.896 33 H 0.088 0.912 34 H 0.413 0.587 35 H 0.208 0.792 36 H 0.086 0.914 37 H 0.092 0.908 38 H 0.103 0.897 39 H 0.132 0.868 40 H 0.386 0.614 41 H -0.289 1.289 42 H -0.295 1.295 43 H 0.154 0.846 44 H 0.066 0.934 45 H 0.101 0.899 46 H 0.156 0.844 47 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.752 -0.659 -1.082 2.162 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.130 4.130 7 C -0.078 4.078 8 C -0.078 4.078 9 H 0.132 0.868 10 C -0.162 4.162 11 C 0.010 3.990 12 H 0.102 0.898 13 N -0.351 5.351 14 C 0.381 3.619 15 O -0.473 6.473 16 C -0.271 4.271 17 C -0.066 4.066 18 N -0.101 5.101 19 C -0.078 4.078 20 C -0.133 4.133 21 C -0.153 4.153 22 O -0.348 6.348 23 Si 0.676 3.324 24 C -0.179 4.179 25 C -0.181 4.181 26 C -0.100 4.100 27 C -0.196 4.196 28 H 0.089 0.911 29 H 0.132 0.868 30 H 0.088 0.912 31 H 0.174 0.826 32 H 0.122 0.878 33 H 0.107 0.893 34 H 0.250 0.750 35 H 0.224 0.776 36 H 0.105 0.895 37 H 0.111 0.889 38 H 0.122 0.878 39 H 0.150 0.850 40 H 0.235 0.765 41 H -0.216 1.216 42 H -0.222 1.222 43 H 0.172 0.828 44 H 0.085 0.915 45 H 0.119 0.881 46 H 0.174 0.826 47 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 1.687 0.237 -0.815 1.888 hybrid contribution 0.864 -0.916 -0.867 1.529 sum 2.551 -0.679 -1.682 3.130 Atomic orbital electron populations 1.23399 0.75806 1.05715 1.02716 1.86107 1.24024 1.26487 1.88825 1.19323 0.91021 0.86459 1.00439 1.17434 0.86593 0.83289 1.11186 1.91453 1.76825 1.50161 1.94652 1.21114 1.01876 0.89183 1.00848 1.19618 0.93386 0.94230 1.00575 1.21595 1.00255 0.88621 0.97346 0.86811 1.23392 1.04266 0.92494 0.96011 1.21822 0.86308 0.93510 0.97351 0.89757 1.45355 1.09311 1.11451 1.68968 1.17645 0.87846 0.81265 0.75121 1.90752 1.36828 1.66351 1.53324 1.20332 0.91901 0.96608 1.18274 1.22408 0.86650 0.96017 1.01538 1.43719 1.08055 1.08927 1.49439 1.22440 0.75452 1.05101 1.04800 1.20842 0.92395 0.90030 1.10063 1.24710 0.90614 0.99045 1.00951 1.86559 1.28753 1.95603 1.23930 0.93364 0.84353 0.73175 0.81520 1.21816 0.94119 0.96121 1.05859 1.23628 1.02009 0.94681 0.97761 1.21213 0.94233 0.97824 0.96740 1.21419 1.01433 0.90849 1.05947 0.91069 0.86754 0.91168 0.82636 0.87777 0.89332 0.75033 0.77567 0.89508 0.88897 0.87819 0.84999 0.76484 1.21620 1.22185 0.82834 0.91491 0.88116 0.82639 0.82354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.24 10.36 -93.03 -0.96 -3.21 16 3 C 0.07 0.39 6.69 22.53 0.15 0.54 16 4 C 0.03 0.23 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.72 17.11 44.97 0.77 -0.95 16 6 C -0.11 -0.08 9.68 22.30 0.22 0.14 16 7 C -0.08 0.21 5.29 -19.85 -0.11 0.10 16 8 C -0.06 0.39 3.87 -10.92 -0.04 0.35 16 9 H 0.11 -1.04 8.09 -2.39 -0.02 -1.06 16 10 C -0.12 0.86 7.29 31.12 0.23 1.08 16 11 C 0.12 -0.26 4.30 45.52 0.20 -0.07 16 12 H 0.08 0.22 7.50 -2.39 -0.02 0.20 16 13 N -0.70 1.45 5.25 -443.44 -2.33 -0.88 16 14 C 0.59 3.60 7.81 86.62 0.68 4.27 16 15 O -0.59 -9.10 16.59 -4.11 -0.07 -9.17 16 16 C -0.26 -0.78 6.29 -19.04 -0.12 -0.90 16 17 C 0.07 -0.29 10.83 83.92 0.91 0.62 16 18 N -0.43 1.48 3.09 -533.23 -1.65 -0.16 16 19 C 0.06 -0.56 9.81 127.77 1.25 0.70 16 20 C -0.02 0.00 6.14 40.98 0.25 0.26 16 21 C -0.04 0.10 2.87 71.24 0.20 0.31 16 22 O -0.54 1.30 10.31 -148.98 -1.54 -0.24 16 23 Si 0.77 -0.76 31.11 68.60 2.13 1.37 16 24 C -0.16 -0.56 9.49 23.62 0.22 -0.33 16 25 C -0.14 0.55 7.27 31.21 0.23 0.78 16 26 C -0.08 0.26 8.62 22.26 0.19 0.45 16 27 C -0.18 0.13 9.04 22.36 0.20 0.34 16 28 H 0.07 -0.41 7.66 -2.38 -0.02 -0.43 16 29 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 30 H 0.07 -0.39 7.66 -2.39 -0.02 -0.41 16 31 H 0.16 -0.52 8.05 -2.91 -0.02 -0.54 16 32 H 0.10 -0.78 7.73 -2.39 -0.02 -0.80 16 33 H 0.09 -0.75 8.14 -2.39 -0.02 -0.77 16 34 H 0.41 -3.66 7.65 -92.71 -0.71 -4.37 16 35 H 0.21 -2.65 7.45 -2.91 -0.02 -2.67 16 36 H 0.09 -0.94 8.14 -2.39 -0.02 -0.96 16 37 H 0.09 -0.64 6.73 -2.39 -0.02 -0.66 16 38 H 0.10 -1.34 8.13 -2.38 -0.02 -1.35 16 39 H 0.13 -0.56 7.96 -2.39 -0.02 -0.58 16 40 H 0.39 -2.63 8.70 -74.06 -0.64 -3.27 16 41 H -0.29 -1.42 7.11 99.48 0.71 -0.72 16 42 H -0.30 -1.57 7.11 99.48 0.71 -0.86 16 43 H 0.15 0.45 6.88 -2.91 -0.02 0.43 16 44 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 45 H 0.10 -0.51 6.31 -2.39 -0.02 -0.52 16 46 H 0.16 -1.19 6.64 -2.91 -0.02 -1.21 16 47 H 0.16 -0.89 6.30 -2.91 -0.02 -0.90 16 Total: 0.00 -27.38 392.45 2.02 -25.36 By element: Atomic # 1 Polarization: -21.93 SS G_CDS: -0.28 Total: -22.21 kcal Atomic # 6 Polarization: 4.14 SS G_CDS: 5.94 Total: 10.08 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -3.98 Total: -1.04 kcal Atomic # 8 Polarization: -10.04 SS G_CDS: -2.57 Total: -12.61 kcal Atomic # 9 Polarization: -1.72 SS G_CDS: 0.77 Total: -0.95 kcal Atomic # 14 Polarization: -0.76 SS G_CDS: 2.13 Total: 1.37 kcal Total: -27.38 2.02 -25.36 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13287730.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -13.131 kcal (2) G-P(sol) polarization free energy of solvation -27.379 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.016 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.364 kcal (6) G-S(sol) free energy of system = (1) + (5) -38.495 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds