Wall clock time and date at job start Tue Mar 9 2021 12:58:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35968 * 116.99942 * 2 1 4 4 C 1.38897 * 120.05953 * 179.97438 * 3 2 1 5 5 F 1.35101 * 120.05441 * 0.02562 * 4 3 2 6 6 C 1.38333 * 119.90301 * 179.97438 * 4 3 2 7 7 C 1.38260 * 120.02997 * 0.02717 * 6 4 3 8 8 C 1.50700 * 119.93640 * 179.97438 * 7 6 4 9 9 H 1.08993 * 112.91004 * 11.24541 * 8 7 6 10 10 C 1.53962 * 113.66521 * 142.54952 * 8 7 6 11 11 C 1.53782 * 87.11063 * 139.88647 * 10 8 7 12 12 H 1.09004 * 113.68975 * 220.07786 * 11 10 8 13 13 N 1.46501 * 113.61142 * 89.18830 * 11 10 8 14 14 C 1.34769 * 120.00014 * 107.50467 * 13 11 10 15 15 O 1.21586 * 120.00150 * 359.97438 * 14 13 11 16 16 C 1.47609 * 120.00357 * 179.97438 * 14 13 11 17 17 C 1.39712 * 120.08172 * 359.97438 * 16 14 13 18 18 C 1.37724 * 119.90889 * 180.02562 * 17 16 14 19 19 C 1.50706 * 119.95389 * 180.02562 * 18 17 16 20 20 C 1.38974 * 120.08822 * 0.02562 * 18 17 16 21 21 O 1.35719 * 119.91011 * 179.97438 * 20 18 17 22 22 C 1.39015 * 120.17459 * 0.02562 * 20 18 17 23 23 C 1.50704 * 119.95378 * 180.02562 * 22 20 18 24 24 O 1.42905 * 109.46824 * 284.99948 * 23 22 20 25 25 Si 1.86294 * 109.47065 * 165.00015 * 23 22 20 26 26 C 1.37682 * 120.09152 * 359.67802 * 22 20 18 27 27 C 1.53781 * 87.08260 * 334.63747 * 11 10 8 28 28 C 1.38262 * 120.12467 * 0.22691 * 7 6 4 29 29 C 1.38181 * 120.09288 * 359.49477 * 28 7 6 30 30 H 1.08996 * 109.47374 * 300.00269 * 1 2 3 31 31 H 1.09002 * 109.47155 * 60.00339 * 1 2 3 32 32 H 1.09000 * 109.46866 * 179.97438 * 1 2 3 33 33 H 1.07996 * 119.98778 * 179.97438 * 6 4 3 34 34 H 1.08997 * 113.53543 * 25.33321 * 10 8 7 35 35 H 1.08994 * 113.66446 * 254.45524 * 10 8 7 36 36 H 0.97001 * 119.99973 * 287.49325 * 13 11 10 37 37 H 1.08000 * 120.04640 * 0.03169 * 17 16 14 38 38 H 1.08999 * 109.46687 * 90.00530 * 19 18 17 39 39 H 1.09006 * 109.46718 * 210.00188 * 19 18 17 40 40 H 1.09001 * 109.47323 * 330.00345 * 19 18 17 41 41 H 0.96698 * 113.99206 * 89.99833 * 21 20 18 42 42 H 1.09001 * 109.46886 * 44.99808 * 23 22 20 43 43 H 0.96699 * 113.99637 * 180.02562 * 24 23 22 44 44 H 1.48495 * 110.00305 * 59.99973 * 25 23 22 45 45 H 1.48501 * 109.99817 * 181.31991 * 25 23 22 46 46 H 1.07992 * 120.04590 * 180.32522 * 26 22 20 47 47 H 1.09002 * 113.61445 * 139.98212 * 27 11 10 48 48 H 1.09002 * 113.61408 * 270.79943 * 27 11 10 49 49 H 1.08000 * 119.95312 * 179.72431 * 28 7 6 50 50 H 1.07998 * 120.01787 * 180.23406 * 29 28 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4332 1.2856 0.0005 5 9 4.1713 0.1541 0.0005 6 6 4.0579 2.5199 0.0000 7 6 3.3023 3.6778 -0.0005 8 6 3.9850 5.0213 -0.0005 9 1 5.0551 4.9534 -0.1959 10 6 3.2672 6.0792 -0.8585 11 6 3.5875 7.0883 0.2569 12 1 2.7743 7.7835 0.4653 13 7 4.8796 7.7580 0.0890 14 6 4.9242 9.0534 -0.2801 15 8 3.8921 9.6661 -0.4742 16 6 6.2260 9.7285 -0.4488 17 6 7.4130 9.0263 -0.2258 18 6 8.6257 9.6598 -0.3837 19 6 9.9068 8.9031 -0.1439 20 6 8.6695 10.9958 -0.7639 21 8 9.8665 11.6166 -0.9179 22 6 7.4906 11.6982 -0.9857 23 6 7.5439 13.1466 -1.3984 24 8 7.8867 13.9515 -0.2683 25 14 5.8785 13.6683 -2.0502 26 6 6.2744 11.0704 -0.8359 27 6 3.6353 5.8899 1.2195 28 6 1.9216 3.6054 0.0043 29 6 1.2923 2.3752 -0.0010 30 1 -0.3634 0.5138 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 -0.3633 -1.0277 -0.0005 33 1 5.1362 2.5792 0.0008 34 1 2.2011 5.8889 -0.9822 35 1 3.7719 6.2946 -1.8002 36 1 5.7030 7.2691 0.2436 37 1 7.3798 7.9881 0.0700 38 1 10.2342 8.4390 -1.0743 39 1 10.6748 9.5917 0.2086 40 1 9.7380 8.1316 0.6073 41 1 10.2296 11.5542 -1.8120 42 1 8.2955 13.2750 -2.1773 43 1 7.9389 14.8977 -0.4608 44 1 4.8450 13.4980 -0.9976 45 1 5.9267 15.0859 -2.4901 46 1 5.3591 11.6153 -1.0135 47 1 4.4372 5.9524 1.9551 48 1 2.6701 5.6488 1.6649 49 1 1.3341 4.5116 0.0084 50 1 0.2137 2.3201 -0.0011 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13287732.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:34 Heat of formation + Delta-G solvation = -106.741912 kcal Electronic energy + Delta-G solvation = -34844.089137 eV Core-core repulsion = 29912.007490 eV Total energy + Delta-G solvation = -4932.081648 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 388.156 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -49.85858 -41.89657 -41.33273 -40.66994 -39.66981 -37.98029 -37.90056 -37.47471 -34.68516 -34.02322 -32.01549 -31.78525 -30.95526 -28.39685 -27.97574 -26.93610 -26.64121 -26.05799 -24.70896 -23.78136 -22.61715 -21.94998 -21.58035 -20.27946 -19.50605 -19.39150 -18.65083 -18.62678 -17.99949 -17.75037 -17.50101 -17.18040 -16.83725 -16.57451 -16.27133 -16.10111 -16.08137 -15.94782 -15.66816 -15.60054 -15.32246 -15.16503 -14.89186 -14.61205 -14.28358 -14.04897 -13.99524 -13.71472 -13.67818 -13.57878 -13.51736 -13.37347 -13.08667 -12.96634 -12.89322 -12.88291 -12.65272 -12.34152 -12.18562 -11.96930 -11.80895 -11.48203 -11.44834 -11.24140 -11.13588 -10.52882 -10.18938 -9.95778 -9.94600 -9.63087 -9.10817 -5.02476 -0.38290 0.07591 0.10204 0.18480 1.19348 1.49128 1.60521 1.87880 2.00162 2.19242 2.47851 2.54861 3.11052 3.18828 3.31713 3.48496 3.55901 3.61231 3.65216 3.71774 3.77268 3.79174 3.97664 4.01200 4.06023 4.14994 4.19144 4.24206 4.33949 4.34064 4.35201 4.44780 4.53276 4.62928 4.66592 4.70273 4.73801 4.82161 4.85129 4.86584 4.90967 4.92763 5.05744 5.05864 5.09944 5.11800 5.19075 5.19553 5.23032 5.33732 5.46208 5.61652 5.65361 5.66484 6.26526 6.44363 6.54765 6.77834 7.11877 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.073 3.927 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.111 4.111 7 C -0.078 4.078 8 C -0.061 4.061 9 H 0.116 0.884 10 C -0.140 4.140 11 C 0.111 3.889 12 H 0.088 0.912 13 N -0.692 5.692 14 C 0.563 3.437 15 O -0.578 6.578 16 C -0.152 4.152 17 C -0.053 4.053 18 C -0.121 4.121 19 C -0.111 4.111 20 C 0.158 3.842 21 O -0.495 6.495 22 C -0.120 4.120 23 C -0.064 4.064 24 O -0.553 6.553 25 Si 0.743 3.257 26 C -0.065 4.065 27 C -0.126 4.126 28 C -0.082 4.082 29 C -0.178 4.178 30 H 0.070 0.930 31 H 0.070 0.930 32 H 0.114 0.886 33 H 0.157 0.843 34 H 0.102 0.898 35 H 0.072 0.928 36 H 0.416 0.584 37 H 0.166 0.834 38 H 0.090 0.910 39 H 0.067 0.933 40 H 0.084 0.916 41 H 0.413 0.587 42 H 0.104 0.896 43 H 0.394 0.606 44 H -0.311 1.311 45 H -0.274 1.274 46 H 0.127 0.873 47 H 0.088 0.912 48 H 0.105 0.895 49 H 0.156 0.844 50 H 0.158 0.842 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.035 -1.670 -3.172 4.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.027 3.973 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.129 4.129 7 C -0.078 4.078 8 C -0.079 4.079 9 H 0.134 0.866 10 C -0.178 4.178 11 C 0.006 3.994 12 H 0.106 0.894 13 N -0.344 5.344 14 C 0.351 3.649 15 O -0.458 6.458 16 C -0.155 4.155 17 C -0.072 4.072 18 C -0.121 4.121 19 C -0.167 4.167 20 C 0.112 3.888 21 O -0.309 6.309 22 C -0.121 4.121 23 C -0.174 4.174 24 O -0.363 6.363 25 Si 0.650 3.350 26 C -0.084 4.084 27 C -0.164 4.164 28 C -0.100 4.100 29 C -0.197 4.197 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.132 0.868 33 H 0.175 0.825 34 H 0.121 0.879 35 H 0.091 0.909 36 H 0.254 0.746 37 H 0.183 0.817 38 H 0.108 0.892 39 H 0.086 0.914 40 H 0.103 0.897 41 H 0.274 0.726 42 H 0.121 0.879 43 H 0.245 0.755 44 H -0.239 1.239 45 H -0.201 1.201 46 H 0.145 0.855 47 H 0.106 0.894 48 H 0.123 0.877 49 H 0.174 0.826 50 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 0.694 -1.399 -2.360 2.830 hybrid contribution 0.566 0.509 0.245 0.800 sum 1.260 -0.890 -2.115 2.618 Atomic orbital electron populations 1.23394 0.75829 1.05706 1.02696 1.86110 1.24003 1.26507 1.88825 1.19335 0.91046 0.86452 1.00426 1.17440 0.86576 0.83320 1.11151 1.91454 1.76811 1.50175 1.94644 1.21123 1.01923 0.89154 1.00745 1.19597 0.93342 0.94204 1.00649 1.21600 1.00425 0.88676 0.97222 0.86566 1.23609 1.02234 0.94239 0.97758 1.21921 0.85965 0.93658 0.97845 0.89415 1.45439 1.09894 1.10249 1.68840 1.18323 0.88462 0.82124 0.75953 1.90790 1.36371 1.66238 1.52415 1.19781 0.93302 0.94825 1.07618 1.21379 0.89506 1.00709 0.95580 1.20461 0.97283 0.93067 1.01335 1.20771 0.92588 0.99790 1.03596 1.18436 0.84804 0.89703 0.95812 1.84733 1.32381 1.76474 1.37297 1.19656 0.92762 0.95348 1.04293 1.24644 1.11194 0.89430 0.92133 1.86591 1.91554 1.22989 1.35194 0.94346 0.73932 0.81770 0.84968 1.21064 0.97284 0.94301 0.95771 1.23421 1.04385 0.92437 0.96138 1.21209 0.94242 0.97795 0.96763 1.21416 1.01413 0.90879 1.05984 0.91114 0.91155 0.86771 0.82548 0.87943 0.90949 0.74573 0.81660 0.89163 0.91368 0.89712 0.72612 0.87853 0.75549 1.23931 1.20074 0.85533 0.89355 0.87690 0.82632 0.82413 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.13 10.36 -93.19 -0.97 -3.10 16 3 C 0.07 0.36 6.69 22.53 0.15 0.51 16 4 C 0.03 0.22 7.31 22.45 0.16 0.38 16 5 F -0.15 -1.65 17.11 44.97 0.77 -0.89 16 6 C -0.11 0.00 9.68 22.30 0.22 0.22 16 7 C -0.08 0.28 5.29 -19.85 -0.11 0.17 16 8 C -0.06 0.46 3.87 -10.95 -0.04 0.42 16 9 H 0.12 -1.22 8.09 -2.39 -0.02 -1.24 16 10 C -0.14 0.78 7.26 31.18 0.23 1.00 16 11 C 0.11 -0.39 4.32 45.52 0.20 -0.19 16 12 H 0.09 0.11 7.46 -2.38 -0.02 0.09 16 13 N -0.69 2.19 5.21 -443.13 -2.31 -0.12 16 14 C 0.56 2.72 7.76 86.72 0.67 3.40 16 15 O -0.58 -7.94 15.94 -3.99 -0.06 -8.00 16 16 C -0.15 -0.43 5.87 -20.08 -0.12 -0.55 16 17 C -0.05 0.18 9.18 22.50 0.21 0.39 16 18 C -0.12 0.27 5.89 -19.81 -0.12 0.16 16 19 C -0.11 0.75 9.78 71.24 0.70 1.45 16 20 C 0.16 0.16 6.66 22.63 0.15 0.31 16 21 O -0.49 0.61 11.85 -90.40 -1.07 -0.46 16 22 C -0.12 -0.43 5.30 -19.81 -0.11 -0.53 16 23 C -0.06 -0.08 2.36 71.24 0.17 0.09 16 24 O -0.55 -2.75 12.86 -148.98 -1.92 -4.66 16 25 Si 0.74 1.46 30.18 68.60 2.07 3.53 16 26 C -0.07 -0.38 8.20 22.50 0.18 -0.20 16 27 C -0.13 0.97 7.28 31.12 0.23 1.19 16 28 C -0.08 0.32 8.59 22.26 0.19 0.51 16 29 C -0.18 0.23 9.04 22.36 0.20 0.43 16 30 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 31 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 32 H 0.11 -0.66 8.14 -2.39 -0.02 -0.68 16 33 H 0.16 -0.64 8.05 -2.91 -0.02 -0.66 16 34 H 0.10 -0.68 6.32 -2.39 -0.02 -0.69 16 35 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 36 H 0.42 -4.04 6.73 -92.71 -0.62 -4.66 16 37 H 0.17 -1.85 6.39 -2.91 -0.02 -1.86 16 38 H 0.09 -0.88 8.14 -2.39 -0.02 -0.90 16 39 H 0.07 -0.29 7.52 -2.38 -0.02 -0.30 16 40 H 0.08 -0.78 8.08 -2.39 -0.02 -0.80 16 41 H 0.41 -4.64 9.06 -74.06 -0.67 -5.31 16 42 H 0.10 -0.49 7.82 -2.39 -0.02 -0.51 16 43 H 0.39 -1.32 8.74 -74.06 -0.65 -1.96 16 44 H -0.31 -3.71 6.76 99.48 0.67 -3.04 16 45 H -0.27 -1.21 7.11 99.48 0.71 -0.50 16 46 H 0.13 1.11 4.47 -2.91 -0.01 1.10 16 47 H 0.09 -0.79 8.14 -2.39 -0.02 -0.81 16 48 H 0.10 -0.85 7.71 -2.39 -0.02 -0.87 16 49 H 0.16 -1.33 6.67 -2.91 -0.02 -1.35 16 50 H 0.16 -0.95 6.30 -2.91 -0.02 -0.96 16 Total: 0.00 -30.46 414.85 -0.10 -30.57 By element: Atomic # 1 Polarization: -26.18 SS G_CDS: -0.90 Total: -27.08 kcal Atomic # 6 Polarization: 5.93 SS G_CDS: 4.28 Total: 10.21 kcal Atomic # 7 Polarization: 2.19 SS G_CDS: -2.31 Total: -0.12 kcal Atomic # 8 Polarization: -12.21 SS G_CDS: -4.02 Total: -16.22 kcal Atomic # 9 Polarization: -1.65 SS G_CDS: 0.77 Total: -0.89 kcal Atomic # 14 Polarization: 1.46 SS G_CDS: 2.07 Total: 3.53 kcal Total: -30.46 -0.10 -30.57 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13287732.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -76.176 kcal (2) G-P(sol) polarization free energy of solvation -30.464 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -106.639 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.103 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.566 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.742 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds