Wall clock time and date at job start Tue Mar 9 2021 12:58:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35956 * 116.99934 * 2 1 4 4 C 1.38912 * 120.06288 * 179.97438 * 3 2 1 5 5 F 1.35098 * 120.04780 * 0.04759 * 4 3 2 6 6 C 1.38336 * 119.90089 * 179.76666 * 4 3 2 7 7 C 1.38252 * 120.03269 * 0.51100 * 6 4 3 8 8 C 1.50698 * 119.93913 * 179.76323 * 7 6 4 9 9 H 1.08998 * 112.84996 * 190.91754 * 8 7 6 10 10 C 1.53778 * 113.69240 * 322.19410 * 8 7 6 11 11 C 1.53778 * 87.08449 * 139.98944 * 10 8 7 12 12 H 1.08993 * 113.61229 * 220.02023 * 11 10 8 13 13 N 1.46501 * 113.61560 * 89.11214 * 11 10 8 14 14 C 1.34781 * 119.99552 * 107.49938 * 13 11 10 15 15 O 1.21587 * 120.00377 * 0.02562 * 14 13 11 16 16 C 1.47531 * 119.99599 * 179.97438 * 14 13 11 17 17 C 1.40143 * 120.19212 * 180.02562 * 16 14 13 18 18 O 1.35655 * 120.14847 * 0.02562 * 17 16 14 19 19 C 1.38704 * 119.70225 * 180.02562 * 17 16 14 20 20 C 1.38050 * 120.08638 * 359.97438 * 19 17 16 21 21 C 1.50701 * 119.80795 * 180.02562 * 20 19 17 22 22 O 1.42894 * 109.47180 * 64.99998 * 21 20 19 23 23 Si 1.86298 * 109.47096 * 185.00040 * 21 20 19 24 24 C 1.38553 * 120.38921 * 0.02702 * 20 19 17 25 25 C 1.37788 * 120.29856 * 359.67468 * 24 20 19 26 26 C 1.53784 * 87.08081 * 334.56700 * 11 10 8 27 27 C 1.38261 * 120.12354 * 359.48999 * 7 6 4 28 28 C 1.38183 * 120.09808 * 0.25511 * 27 7 6 29 29 H 1.08994 * 109.47485 * 59.99516 * 1 2 3 30 30 H 1.09000 * 109.47127 * 180.02562 * 1 2 3 31 31 H 1.09008 * 109.46824 * 299.99602 * 1 2 3 32 32 H 1.07998 * 119.98312 * 180.27792 * 6 4 3 33 33 H 1.08999 * 113.61111 * 254.54007 * 10 8 7 34 34 H 1.08999 * 113.61280 * 25.35390 * 10 8 7 35 35 H 0.96998 * 120.00259 * 287.50678 * 13 11 10 36 36 H 0.96709 * 113.99328 * 89.99823 * 18 17 16 37 37 H 1.08001 * 119.96049 * 179.97438 * 19 17 16 38 38 H 1.08998 * 109.46991 * 304.99684 * 21 20 19 39 39 H 0.96706 * 114.00075 * 60.00162 * 22 21 20 40 40 H 1.48501 * 110.00074 * 58.68358 * 23 21 20 41 41 H 1.48502 * 109.99891 * 179.97438 * 23 21 20 42 42 H 1.08003 * 119.84881 * 179.97438 * 24 20 19 43 43 H 1.07999 * 120.04711 * 180.32779 * 25 24 20 44 44 H 1.09004 * 113.61451 * 270.88641 * 26 11 10 45 45 H 1.08994 * 113.61477 * 139.97943 * 26 11 10 46 46 H 1.08009 * 119.95321 * 180.27722 * 27 7 6 47 47 H 1.07999 * 120.01695 * 179.97438 * 28 27 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 0.0005 5 9 4.1713 0.1540 0.0001 6 6 4.0579 2.5200 -0.0043 7 6 3.3023 3.6778 0.0009 8 6 3.9849 5.0213 0.0010 9 1 3.2980 5.8450 0.1955 10 6 5.2600 5.0665 0.8593 11 6 5.8855 5.9217 -0.2552 12 1 6.9273 5.6762 -0.4612 13 7 5.6608 7.3597 -0.0877 14 6 6.6783 8.1621 0.2829 15 8 7.7828 7.6926 0.4778 16 6 6.4521 9.6102 0.4510 17 6 7.5073 10.4484 0.8357 18 8 8.7424 9.9320 1.0550 19 6 7.2831 11.8083 0.9912 20 6 6.0258 12.3325 0.7672 21 6 5.7894 13.8111 0.9375 22 8 6.5455 14.5299 -0.0389 23 14 3.9770 14.1799 0.7144 24 6 4.9799 11.5072 0.3868 25 6 5.1862 10.1549 0.2216 26 6 4.8924 5.2512 -1.2191 27 6 1.9216 3.6053 0.0004 28 6 1.2922 2.3751 0.0000 29 1 -0.3634 0.5139 -0.8899 30 1 -0.3633 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8901 32 1 5.1362 2.5792 -0.0085 33 1 5.1337 5.6009 1.8009 34 1 5.7364 4.0943 0.9850 35 1 4.7797 7.7342 -0.2435 36 1 9.3060 9.9133 0.2693 37 1 8.0932 12.4580 1.2880 38 1 6.1020 14.1164 1.9361 39 1 6.3196 14.3083 -0.9527 40 1 3.1771 13.4137 1.7035 41 1 3.7306 15.6349 0.8805 42 1 3.9997 11.9266 0.2142 43 1 4.3693 9.5162 -0.0802 44 1 5.2692 4.3296 -1.6628 45 1 4.4694 5.9346 -1.9553 46 1 1.3340 4.5116 0.0000 47 1 0.2137 2.3200 0.0000 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13422076.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:54 Heat of formation + Delta-G solvation = -102.368631 kcal Electronic energy + Delta-G solvation = -32672.084692 eV Core-core repulsion = 27895.730303 eV Total energy + Delta-G solvation = -4776.354389 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.141 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -49.87746 -41.87890 -41.26329 -40.51183 -39.44808 -38.44729 -37.83469 -37.12260 -34.59364 -32.65700 -31.74872 -31.09916 -31.08550 -28.50575 -27.57257 -26.67048 -25.73235 -23.97489 -23.87528 -23.54335 -22.56752 -21.74723 -20.31840 -19.42701 -19.34494 -18.75561 -18.16995 -17.95930 -17.77269 -17.25416 -17.18850 -16.78104 -16.44484 -16.23409 -16.13856 -16.08838 -15.92201 -15.71353 -15.55869 -15.33071 -15.19769 -14.95604 -14.66996 -14.32000 -14.12453 -13.91392 -13.81270 -13.54586 -13.45672 -13.22230 -13.06006 -12.91397 -12.85576 -12.29108 -12.21629 -12.18163 -12.14401 -11.99847 -11.68221 -11.45041 -11.21140 -10.94887 -10.46796 -10.21717 -9.99877 -9.93738 -9.75727 -9.11294 -4.97253 -0.40206 0.10458 0.16546 0.17818 1.30155 1.66485 1.73435 2.01805 2.02884 2.19057 2.48135 2.59099 3.13369 3.18729 3.45647 3.47487 3.56501 3.66556 3.69686 3.73119 3.74749 3.82164 3.94454 4.00891 4.10705 4.21633 4.27093 4.30123 4.34407 4.34851 4.38353 4.52060 4.60557 4.66673 4.69711 4.77478 4.80036 4.85968 4.90239 4.93035 5.04358 5.04973 5.09222 5.12021 5.17594 5.22331 5.26350 5.47900 5.61651 5.63960 5.67307 6.27098 6.50128 6.71780 6.76627 7.19468 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.342 6.342 3 C 0.074 3.926 4 C 0.033 3.967 5 F -0.154 7.154 6 C -0.116 4.116 7 C -0.080 4.080 8 C -0.056 4.056 9 H 0.129 0.871 10 C -0.150 4.150 11 C 0.115 3.885 12 H 0.082 0.918 13 N -0.692 5.692 14 C 0.558 3.442 15 O -0.565 6.565 16 C -0.179 4.179 17 C 0.151 3.849 18 O -0.500 6.500 19 C -0.143 4.143 20 C -0.074 4.074 21 C -0.087 4.087 22 O -0.555 6.555 23 Si 0.794 3.206 24 C -0.129 4.129 25 C -0.050 4.050 26 C -0.124 4.124 27 C -0.076 4.076 28 C -0.179 4.179 29 H 0.072 0.928 30 H 0.113 0.887 31 H 0.071 0.929 32 H 0.147 0.853 33 H 0.068 0.932 34 H 0.089 0.911 35 H 0.417 0.583 36 H 0.407 0.593 37 H 0.130 0.870 38 H 0.105 0.895 39 H 0.397 0.603 40 H -0.277 1.277 41 H -0.305 1.305 42 H 0.168 0.832 43 H 0.174 0.826 44 H 0.095 0.905 45 H 0.099 0.901 46 H 0.167 0.833 47 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.390 4.085 -5.607 12.493 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.028 3.972 4 C 0.013 3.987 5 F -0.133 7.133 6 C -0.134 4.134 7 C -0.080 4.080 8 C -0.074 4.074 9 H 0.147 0.853 10 C -0.188 4.188 11 C 0.009 3.991 12 H 0.100 0.900 13 N -0.345 5.345 14 C 0.346 3.654 15 O -0.445 6.445 16 C -0.183 4.183 17 C 0.105 3.895 18 O -0.313 6.313 19 C -0.162 4.162 20 C -0.074 4.074 21 C -0.196 4.196 22 O -0.363 6.363 23 Si 0.699 3.301 24 C -0.146 4.146 25 C -0.069 4.069 26 C -0.162 4.162 27 C -0.093 4.093 28 C -0.197 4.197 29 H 0.091 0.909 30 H 0.131 0.869 31 H 0.089 0.911 32 H 0.165 0.835 33 H 0.087 0.913 34 H 0.107 0.893 35 H 0.256 0.744 36 H 0.267 0.733 37 H 0.148 0.852 38 H 0.122 0.878 39 H 0.248 0.752 40 H -0.203 1.203 41 H -0.234 1.234 42 H 0.184 0.816 43 H 0.191 0.809 44 H 0.114 0.886 45 H 0.117 0.883 46 H 0.184 0.816 47 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -10.139 3.978 -4.029 11.613 hybrid contribution 1.003 -0.475 0.307 1.152 sum -9.136 3.503 -3.721 10.468 Atomic orbital electron populations 1.23403 0.75733 1.05704 1.02789 1.86110 1.24103 1.26561 1.88812 1.19341 0.90884 0.86616 1.00386 1.17437 0.86728 0.83173 1.11354 1.91449 1.76923 1.50237 1.94675 1.21013 1.01628 0.89577 1.01226 1.19620 0.93500 0.94141 1.00746 1.21593 0.95191 0.93881 0.96725 0.85317 1.23592 0.96552 1.00609 0.98065 1.21829 1.00161 0.79586 0.97478 0.89990 1.45399 1.12917 1.07000 1.69208 1.18326 0.84319 0.86470 0.76284 1.90819 1.25506 1.76894 1.51263 1.20436 0.96474 0.92964 1.08448 1.18778 0.85680 0.90522 0.94549 1.84718 1.23136 1.84244 1.39250 1.21332 0.98772 0.93400 1.02650 1.20577 0.93201 0.96782 0.96888 1.25450 1.10710 0.88190 0.95222 1.86507 1.65056 1.65081 1.19688 0.93703 0.71205 0.76843 0.88376 1.21253 0.99226 0.93379 1.00751 1.21536 0.94888 0.95735 0.94698 1.23390 0.94995 1.01545 0.96251 1.21335 0.93772 0.98138 0.96094 1.21477 1.01511 0.90872 1.05874 0.90919 0.86870 0.91091 0.83542 0.91319 0.89258 0.74420 0.73290 0.85176 0.87762 0.75221 1.20331 1.23373 0.81561 0.80877 0.88611 0.88295 0.81592 0.82099 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.14 10.36 -93.05 -0.96 -3.10 16 3 C 0.07 0.36 6.69 22.53 0.15 0.51 16 4 C 0.03 0.23 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.90 17.11 44.97 0.77 -1.13 16 6 C -0.12 -0.16 8.57 22.30 0.19 0.03 16 7 C -0.08 0.29 5.29 -19.86 -0.11 0.19 16 8 C -0.06 0.45 3.85 -11.01 -0.04 0.40 16 9 H 0.13 -1.69 8.09 -2.39 -0.02 -1.71 16 10 C -0.15 0.49 7.25 31.12 0.23 0.72 16 11 C 0.12 -0.33 4.32 45.52 0.20 -0.13 16 12 H 0.08 0.23 7.46 -2.39 -0.02 0.21 16 13 N -0.69 2.94 5.21 -443.20 -2.31 0.63 16 14 C 0.56 2.18 7.76 86.69 0.67 2.85 16 15 O -0.57 -7.62 14.76 16.93 0.25 -7.37 16 16 C -0.18 -0.12 5.89 -20.01 -0.12 -0.23 16 17 C 0.15 0.64 6.72 22.84 0.15 0.80 16 18 O -0.50 -3.91 11.58 -68.79 -0.80 -4.71 16 19 C -0.14 -0.23 9.60 22.34 0.21 -0.01 16 20 C -0.07 0.24 5.35 -19.83 -0.11 0.13 16 21 C -0.09 0.31 2.79 71.24 0.20 0.51 16 22 O -0.56 1.32 12.83 -148.98 -1.91 -0.59 16 23 Si 0.79 -5.41 29.78 68.60 2.04 -3.36 16 24 C -0.13 1.03 8.64 22.24 0.19 1.22 16 25 C -0.05 0.38 9.54 22.52 0.21 0.60 16 26 C -0.12 0.97 7.29 31.12 0.23 1.19 16 27 C -0.08 0.42 9.70 22.26 0.22 0.63 16 28 C -0.18 0.41 9.04 22.36 0.20 0.62 16 29 H 0.07 -0.50 7.66 -2.39 -0.02 -0.51 16 30 H 0.11 -0.69 8.14 -2.39 -0.02 -0.71 16 31 H 0.07 -0.46 7.66 -2.38 -0.02 -0.48 16 32 H 0.15 -0.07 6.68 -2.91 -0.02 -0.09 16 33 H 0.07 -0.09 8.14 -2.39 -0.02 -0.11 16 34 H 0.09 -0.17 6.33 -2.39 -0.02 -0.18 16 35 H 0.42 -5.01 6.73 -92.71 -0.62 -5.63 16 36 H 0.41 0.31 9.06 -74.05 -0.67 -0.36 16 37 H 0.13 0.33 8.06 -2.91 -0.02 0.31 16 38 H 0.10 -0.14 7.96 -2.39 -0.02 -0.16 16 39 H 0.40 -4.46 8.70 -74.05 -0.64 -5.11 16 40 H -0.28 0.85 7.11 99.48 0.71 1.56 16 41 H -0.31 -0.63 7.11 99.48 0.71 0.07 16 42 H 0.17 -2.38 4.88 -2.91 -0.01 -2.39 16 43 H 0.17 -2.80 6.40 -2.91 -0.02 -2.82 16 44 H 0.10 -0.60 7.71 -2.39 -0.02 -0.62 16 45 H 0.10 -1.10 8.14 -2.39 -0.02 -1.12 16 46 H 0.17 -2.05 8.05 -2.91 -0.02 -2.07 16 47 H 0.16 -1.22 6.30 -2.91 -0.02 -1.24 16 Total: 0.00 -31.57 393.44 0.21 -31.35 By element: Atomic # 1 Polarization: -22.34 SS G_CDS: -0.83 Total: -23.17 kcal Atomic # 6 Polarization: 7.50 SS G_CDS: 3.96 Total: 11.47 kcal Atomic # 7 Polarization: 2.94 SS G_CDS: -2.31 Total: 0.63 kcal Atomic # 8 Polarization: -12.36 SS G_CDS: -3.42 Total: -15.78 kcal Atomic # 9 Polarization: -1.90 SS G_CDS: 0.77 Total: -1.13 kcal Atomic # 14 Polarization: -5.41 SS G_CDS: 2.04 Total: -3.36 kcal Total: -31.57 0.21 -31.35 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13422076.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -71.015 kcal (2) G-P(sol) polarization free energy of solvation -31.568 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -102.583 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.214 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -102.369 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds