Wall clock time and date at job start Tue Mar 9 2021 12:59:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42895 * 1 3 3 C 1.35956 * 117.00221 * 2 1 4 4 C 1.38906 * 120.06747 * 180.02562 * 3 2 1 5 5 F 1.35102 * 120.04523 * 0.02562 * 4 3 2 6 6 C 1.38335 * 119.90485 * 179.71899 * 4 3 2 7 7 C 1.38249 * 120.02795 * 0.51569 * 6 4 3 8 8 C 1.50704 * 119.93656 * 179.76472 * 7 6 4 9 9 H 1.08998 * 112.84875 * 190.91988 * 8 7 6 10 10 C 1.53784 * 113.61381 * 322.22474 * 8 7 6 11 11 C 1.53780 * 87.08094 * 139.97874 * 10 8 7 12 12 H 1.08994 * 113.68791 * 220.00453 * 11 10 8 13 13 N 1.46496 * 113.61177 * 89.11992 * 11 10 8 14 14 C 1.34776 * 120.00264 * 107.50088 * 13 11 10 15 15 O 1.21588 * 120.00188 * 359.97438 * 14 13 11 16 16 C 1.47526 * 120.00027 * 179.97438 * 14 13 11 17 17 C 1.39767 * 120.06992 * 179.97438 * 16 14 13 18 18 C 1.37634 * 119.93255 * 179.74323 * 17 16 14 19 19 C 1.50696 * 119.96869 * 180.27129 * 18 17 16 20 20 O 1.42894 * 109.47600 * 255.28188 * 19 18 17 21 21 Si 1.86303 * 109.46891 * 15.28316 * 19 18 17 22 22 C 1.39193 * 120.06434 * 0.55656 * 18 17 16 23 23 N 1.39055 * 119.93056 * 179.72274 * 22 18 17 24 24 C 1.46895 * 111.00035 * 119.72040 * 23 22 18 25 25 C 1.46902 * 110.99836 * 243.67662 * 23 22 18 26 26 C 1.39240 * 120.13952 * 359.44244 * 22 18 17 27 27 C 1.37581 * 120.07096 * 0.27615 * 26 22 18 28 28 C 1.53778 * 87.08359 * 334.56798 * 11 10 8 29 29 C 1.38265 * 120.13067 * 359.48322 * 7 6 4 30 30 C 1.38183 * 120.09003 * 0.25685 * 29 7 6 31 31 H 1.08999 * 109.46985 * 180.02562 * 1 2 3 32 32 H 1.08994 * 109.47433 * 300.00446 * 1 2 3 33 33 H 1.09001 * 109.46801 * 60.00896 * 1 2 3 34 34 H 1.08002 * 119.98149 * 180.25292 * 6 4 3 35 35 H 1.08998 * 113.61143 * 25.43039 * 10 8 7 36 36 H 1.09001 * 113.61510 * 254.53503 * 10 8 7 37 37 H 0.97012 * 119.99936 * 287.50061 * 13 11 10 38 38 H 1.08004 * 120.03516 * 0.04176 * 17 16 14 39 39 H 1.08998 * 109.47275 * 135.27351 * 19 18 17 40 40 H 0.96707 * 114.00239 * 59.99986 * 20 19 18 41 41 H 1.48502 * 110.00396 * 58.67916 * 21 19 18 42 42 H 1.48507 * 110.00005 * 179.97438 * 21 19 18 43 43 H 1.09002 * 109.47411 * 60.00455 * 24 23 22 44 44 H 1.09007 * 109.47071 * 180.02562 * 24 23 22 45 45 H 1.08996 * 109.47424 * 299.99828 * 24 23 22 46 46 H 1.09000 * 109.46807 * 59.99809 * 25 23 22 47 47 H 1.08997 * 109.46913 * 179.97438 * 25 23 22 48 48 H 1.09005 * 109.47092 * 299.99949 * 25 23 22 49 49 H 1.08004 * 119.96729 * 180.30093 * 26 22 18 50 50 H 1.07995 * 120.03805 * 179.97438 * 27 26 22 51 51 H 1.08993 * 113.61716 * 139.97853 * 28 11 10 52 52 H 1.09002 * 113.61530 * 270.80162 * 28 11 10 53 53 H 1.07998 * 119.95629 * 180.23485 * 29 7 6 54 54 H 1.07994 * 120.01294 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2114 0.0000 4 6 3.4333 1.2856 -0.0005 5 9 4.1713 0.1540 -0.0016 6 6 4.0579 2.5199 -0.0064 7 6 3.3023 3.6777 -0.0010 8 6 3.9849 5.0213 -0.0020 9 1 3.2982 5.8450 0.1928 10 6 5.2609 5.0646 0.8552 11 6 5.8864 5.9195 -0.2596 12 1 6.9277 5.6741 -0.4676 13 7 5.6635 7.3576 -0.0912 14 6 6.6823 8.1587 0.2787 15 8 7.7863 7.6877 0.4731 16 6 6.4580 9.6069 0.4478 17 6 7.5134 10.4389 0.8319 18 6 7.3022 11.7905 0.9836 19 6 8.4409 12.6892 1.3918 20 8 8.2900 13.0557 2.7646 21 14 10.0555 11.7882 1.1634 22 6 6.0364 12.3272 0.7662 23 7 5.8248 13.6923 0.9259 24 6 5.3625 14.3035 -0.3272 25 6 4.8796 13.9540 2.0196 26 6 4.9830 11.5010 0.3835 27 6 5.1891 10.1501 0.2245 28 6 4.8916 5.2506 -1.2228 29 6 1.9215 3.6053 -0.0004 30 6 1.2922 2.3751 0.0000 31 1 -0.3633 -1.0277 0.0005 32 1 -0.3634 0.5139 0.8899 33 1 -0.3633 0.5137 -0.8901 34 1 5.1363 2.5791 -0.0110 35 1 5.7371 4.0920 0.9787 36 1 5.1362 5.5986 1.7972 37 1 4.7826 7.7334 -0.2459 38 1 8.4947 10.0224 1.0047 39 1 8.4352 13.5866 0.7732 40 1 8.2865 12.3050 3.3741 41 1 10.2098 11.3736 -0.2542 42 1 11.1867 12.6640 1.5619 43 1 4.4258 13.8383 -0.6345 44 1 5.2052 15.3713 -0.1743 45 1 6.1136 14.1547 -1.1029 46 1 5.2798 13.5511 2.9499 47 1 4.7325 15.0291 2.1231 48 1 3.9255 13.4761 1.7973 49 1 4.0031 11.9212 0.2108 50 1 4.3715 9.5097 -0.0719 51 1 4.4687 5.9348 -1.9583 52 1 5.2674 4.3296 -1.6684 53 1 1.3340 4.5115 0.0000 54 1 0.2137 2.3200 0.0009 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13422196.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:02 Heat of formation + Delta-G solvation = -42.547740 kcal Electronic energy + Delta-G solvation = -36968.666007 eV Core-core repulsion = 31981.549071 eV Total energy + Delta-G solvation = -4987.116937 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.184 amu Computer time = 1.50 seconds Orbital eigenvalues (eV) -49.86965 -41.87947 -41.33299 -40.68716 -39.67241 -37.97985 -37.77286 -37.15996 -34.61839 -32.71684 -31.74733 -31.53773 -30.86374 -28.52873 -28.48432 -26.88941 -26.67606 -26.57573 -25.37924 -23.89819 -23.36473 -22.85399 -22.52087 -21.32091 -20.29867 -19.39838 -19.06081 -18.10591 -17.83914 -17.73132 -17.60006 -17.18540 -17.16168 -16.61266 -16.34942 -16.20060 -16.08607 -16.03180 -15.85861 -15.66101 -15.58129 -15.47394 -15.18606 -14.97724 -14.71629 -14.61184 -14.20721 -14.14402 -13.97526 -13.88872 -13.55727 -13.52058 -13.42407 -13.11786 -13.06666 -12.94139 -12.85396 -12.64246 -12.52910 -12.25011 -12.20684 -12.14344 -12.04071 -12.00354 -11.44567 -11.20468 -11.08870 -10.39017 -10.17866 -10.07956 -9.94477 -9.74489 -9.48690 -9.11050 -5.02954 -0.35993 0.10685 0.18022 0.18131 1.27759 1.56238 1.69067 1.89767 2.02462 2.19188 2.48394 2.65977 2.81389 3.19066 3.47596 3.52706 3.60431 3.67402 3.69836 3.74042 3.75340 3.84101 3.94840 4.01252 4.06329 4.17243 4.21862 4.26255 4.28712 4.34510 4.34546 4.37647 4.46234 4.51274 4.52853 4.60605 4.65476 4.67885 4.69595 4.78867 4.81750 4.88306 4.90027 4.93205 4.95034 5.02330 5.05741 5.06444 5.09800 5.12518 5.16377 5.22104 5.28495 5.47427 5.57798 5.64335 5.67672 5.86892 6.27118 6.31027 6.47951 6.82441 7.15742 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.341 6.341 3 C 0.073 3.927 4 C 0.033 3.967 5 F -0.153 7.153 6 C -0.115 4.115 7 C -0.079 4.079 8 C -0.057 4.057 9 H 0.127 0.873 10 C -0.145 4.145 11 C 0.114 3.886 12 H 0.085 0.915 13 N -0.692 5.692 14 C 0.561 3.439 15 O -0.574 6.574 16 C -0.148 4.148 17 C -0.058 4.058 18 C -0.118 4.118 19 C -0.036 4.036 20 O -0.542 6.542 21 Si 0.734 3.266 22 C 0.137 3.863 23 N -0.525 5.525 24 C 0.024 3.976 25 C 0.034 3.966 26 C -0.157 4.157 27 C -0.055 4.055 28 C -0.128 4.128 29 C -0.077 4.077 30 C -0.179 4.179 31 H 0.113 0.887 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.149 0.851 35 H 0.091 0.909 36 H 0.074 0.926 37 H 0.416 0.584 38 H 0.139 0.861 39 H 0.107 0.893 40 H 0.389 0.611 41 H -0.295 1.295 42 H -0.290 1.290 43 H 0.045 0.955 44 H 0.082 0.918 45 H 0.062 0.938 46 H 0.067 0.933 47 H 0.078 0.922 48 H 0.042 0.958 49 H 0.149 0.851 50 H 0.163 0.837 51 H 0.093 0.907 52 H 0.096 0.904 53 H 0.165 0.835 54 H 0.161 0.839 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.649 2.638 -0.491 10.982 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.256 6.256 3 C 0.027 3.973 4 C 0.014 3.986 5 F -0.132 7.132 6 C -0.133 4.133 7 C -0.080 4.080 8 C -0.075 4.075 9 H 0.145 0.855 10 C -0.184 4.184 11 C 0.008 3.992 12 H 0.104 0.896 13 N -0.344 5.344 14 C 0.350 3.650 15 O -0.454 6.454 16 C -0.151 4.151 17 C -0.077 4.077 18 C -0.119 4.119 19 C -0.148 4.148 20 O -0.348 6.348 21 Si 0.641 3.359 22 C 0.042 3.958 23 N -0.246 5.246 24 C -0.122 4.122 25 C -0.112 4.112 26 C -0.177 4.177 27 C -0.074 4.074 28 C -0.166 4.166 29 C -0.095 4.095 30 C -0.198 4.198 31 H 0.131 0.869 32 H 0.089 0.911 33 H 0.090 0.910 34 H 0.167 0.833 35 H 0.110 0.890 36 H 0.092 0.908 37 H 0.255 0.745 38 H 0.157 0.843 39 H 0.124 0.876 40 H 0.238 0.762 41 H -0.223 1.223 42 H -0.218 1.218 43 H 0.064 0.936 44 H 0.101 0.899 45 H 0.081 0.919 46 H 0.086 0.914 47 H 0.097 0.903 48 H 0.061 0.939 49 H 0.167 0.833 50 H 0.180 0.820 51 H 0.112 0.888 52 H 0.114 0.886 53 H 0.182 0.818 54 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -8.591 2.873 -0.893 9.103 hybrid contribution -1.108 -0.335 -0.563 1.287 sum -9.699 2.538 -1.457 10.131 Atomic orbital electron populations 1.23399 0.75761 1.05700 1.02761 1.86109 1.24075 1.26565 1.88817 1.19341 0.90926 0.86579 1.00408 1.17435 0.86686 0.83208 1.11290 1.91452 1.76900 1.50222 1.94665 1.21020 1.01695 0.89487 1.01134 1.19623 0.93441 0.94206 1.00708 1.21597 0.95331 0.93793 0.96789 0.85516 1.23575 0.96067 1.00662 0.98082 1.21865 1.00275 0.79483 0.97541 0.89641 1.45423 1.12903 1.07162 1.68952 1.18364 0.84142 0.86559 0.75983 1.90800 1.25487 1.76973 1.52126 1.19841 0.95598 0.92449 1.07184 1.21072 0.98900 0.92023 0.95673 1.20235 0.95709 0.93377 1.02587 1.24664 1.02432 1.01552 0.86130 1.86517 1.96292 1.37379 1.14655 0.94262 0.75028 0.83931 0.82662 1.18986 0.92536 0.89418 0.94859 1.59356 1.48885 1.08880 1.07494 1.22530 0.99362 1.00437 0.89869 1.22422 0.92967 1.02589 0.93175 1.21846 1.00050 0.94164 1.01615 1.21448 0.95492 0.95363 0.95057 1.23404 0.95259 1.01571 0.96318 1.21323 0.93853 0.98072 0.96220 1.21466 1.01479 0.90907 1.05930 0.86859 0.91064 0.91009 0.83343 0.89031 0.90753 0.74524 0.84350 0.87573 0.76224 1.22261 1.21752 0.93629 0.89941 0.91871 0.91434 0.90322 0.93940 0.83335 0.81974 0.88814 0.88560 0.81783 0.82200 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.07 9.81 113.37 1.11 1.05 16 2 O -0.34 -2.08 10.36 -93.05 -0.96 -3.04 16 3 C 0.07 0.34 6.69 22.53 0.15 0.49 16 4 C 0.03 0.22 7.31 22.45 0.16 0.39 16 5 F -0.15 -1.82 17.11 44.97 0.77 -1.05 16 6 C -0.11 -0.09 8.57 22.30 0.19 0.10 16 7 C -0.08 0.32 5.29 -19.85 -0.11 0.22 16 8 C -0.06 0.48 3.86 -11.01 -0.04 0.44 16 9 H 0.13 -1.67 8.09 -2.39 -0.02 -1.69 16 10 C -0.15 0.70 7.25 31.12 0.23 0.92 16 11 C 0.11 -0.43 4.32 45.52 0.20 -0.23 16 12 H 0.09 0.13 7.46 -2.39 -0.02 0.11 16 13 N -0.69 3.38 5.21 -443.23 -2.31 1.07 16 14 C 0.56 1.29 7.76 86.69 0.67 1.96 16 15 O -0.57 -6.30 15.94 -3.99 -0.06 -6.36 16 16 C -0.15 0.06 5.88 -20.08 -0.12 -0.06 16 17 C -0.06 -0.10 8.19 22.50 0.18 0.08 16 18 C -0.12 -0.17 5.27 -19.78 -0.10 -0.27 16 19 C -0.04 -0.09 2.33 71.23 0.17 0.08 16 20 O -0.54 -1.15 12.88 -148.98 -1.92 -3.07 16 21 Si 0.73 2.28 29.92 68.60 2.05 4.34 16 22 C 0.14 -0.04 4.70 38.47 0.18 0.14 16 23 N -0.53 0.12 4.20 -745.10 -3.13 -3.01 16 24 C 0.02 -0.08 9.34 127.69 1.19 1.12 16 25 C 0.03 -0.10 9.38 127.69 1.20 1.10 16 26 C -0.16 0.74 8.53 22.36 0.19 0.93 16 27 C -0.05 0.34 9.53 22.50 0.21 0.55 16 28 C -0.13 0.99 7.29 31.12 0.23 1.22 16 29 C -0.08 0.43 9.70 22.26 0.22 0.64 16 30 C -0.18 0.42 9.04 22.36 0.20 0.62 16 31 H 0.11 -0.70 8.14 -2.39 -0.02 -0.72 16 32 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 33 H 0.07 -0.48 7.66 -2.39 -0.02 -0.50 16 34 H 0.15 -0.21 6.67 -2.91 -0.02 -0.23 16 35 H 0.09 -0.33 6.32 -2.39 -0.02 -0.35 16 36 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 37 H 0.42 -4.92 6.72 -92.70 -0.62 -5.54 16 38 H 0.14 0.32 4.70 -2.91 -0.01 0.30 16 39 H 0.11 0.52 7.77 -2.39 -0.02 0.51 16 40 H 0.39 -2.13 8.70 -74.05 -0.64 -2.77 16 41 H -0.30 -2.79 7.11 99.48 0.71 -2.08 16 42 H -0.29 -2.74 7.11 99.48 0.71 -2.03 16 43 H 0.05 -0.26 7.10 -2.39 -0.02 -0.28 16 44 H 0.08 -0.34 8.12 -2.38 -0.02 -0.36 16 45 H 0.06 -0.10 8.14 -2.39 -0.02 -0.12 16 46 H 0.07 -0.07 8.14 -2.39 -0.02 -0.09 16 47 H 0.08 -0.28 8.12 -2.39 -0.02 -0.30 16 48 H 0.04 -0.23 7.32 -2.38 -0.02 -0.25 16 49 H 0.15 -1.28 6.99 -2.91 -0.02 -1.30 16 50 H 0.16 -2.25 6.39 -2.91 -0.02 -2.27 16 51 H 0.09 -0.96 8.14 -2.39 -0.02 -0.98 16 52 H 0.10 -0.61 7.72 -2.39 -0.02 -0.63 16 53 H 0.16 -1.98 8.05 -2.91 -0.02 -2.01 16 54 H 0.16 -1.20 6.30 -2.91 -0.02 -1.22 16 Total: 0.00 -25.70 438.44 0.49 -25.21 By element: Atomic # 1 Polarization: -25.31 SS G_CDS: -0.26 Total: -25.57 kcal Atomic # 6 Polarization: 5.18 SS G_CDS: 6.31 Total: 11.49 kcal Atomic # 7 Polarization: 3.51 SS G_CDS: -5.44 Total: -1.93 kcal Atomic # 8 Polarization: -9.53 SS G_CDS: -2.95 Total: -12.48 kcal Atomic # 9 Polarization: -1.82 SS G_CDS: 0.77 Total: -1.05 kcal Atomic # 14 Polarization: 2.28 SS G_CDS: 2.05 Total: 4.34 kcal Total: -25.70 0.49 -25.21 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13422196.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -17.340 kcal (2) G-P(sol) polarization free energy of solvation -25.695 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -43.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.487 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.208 kcal (6) G-S(sol) free energy of system = (1) + (5) -42.548 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.50 seconds