Wall clock time and date at job start Tue Mar 9 2021 12:59:11 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35966 * 116.99951 * 2 1 4 4 C 1.38904 * 120.06344 * 180.02562 * 3 2 1 5 5 F 1.35107 * 120.04693 * 0.04357 * 4 3 2 6 6 C 1.38326 * 119.90578 * 180.02562 * 4 3 2 7 7 C 1.38257 * 120.02785 * 359.97438 * 6 4 3 8 8 C 1.50701 * 119.93439 * 179.97438 * 7 6 4 9 9 H 1.09004 * 112.85161 * 348.80543 * 8 7 6 10 10 C 1.53781 * 113.61501 * 120.00400 * 8 7 6 11 11 C 1.53777 * 87.08495 * 140.06100 * 10 8 7 12 12 H 1.08996 * 113.61604 * 219.93254 * 11 10 8 13 13 N 1.46505 * 113.61136 * 89.11680 * 11 10 8 14 14 C 1.34778 * 119.99761 * 155.00241 * 13 11 10 15 15 O 1.21650 * 120.00136 * 0.02562 * 14 13 11 16 16 C 1.47043 * 119.99592 * 179.97438 * 14 13 11 17 17 C 1.36229 * 123.49214 * 180.02562 * 16 14 13 18 18 Cl 1.73602 * 124.60312 * 359.97438 * 17 16 14 19 19 S 1.70445 * 110.79187 * 180.02562 * 17 16 14 20 20 C 1.75491 * 92.46309 * 359.97438 * 19 17 16 21 21 C 1.50703 * 124.68283 * 179.97438 * 20 19 17 22 22 O 1.42905 * 109.47264 * 245.02302 * 21 20 19 23 23 Si 1.86300 * 109.47052 * 5.02034 * 21 20 19 24 24 C 1.32686 * 110.63246 * 0.24376 * 20 19 17 25 25 C 1.53782 * 113.68854 * 217.53519 * 8 7 6 26 26 C 1.38253 * 120.12736 * 0.27344 * 7 6 4 27 27 C 1.38185 * 120.09577 * 359.45072 * 26 7 6 28 28 H 1.09000 * 109.47154 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.46886 * 300.00096 * 1 2 3 30 30 H 1.09003 * 109.47627 * 60.00052 * 1 2 3 31 31 H 1.08006 * 119.98989 * 180.02562 * 6 4 3 32 32 H 1.09001 * 113.61154 * 25.50999 * 10 8 7 33 33 H 1.08995 * 113.68833 * 254.62669 * 10 8 7 34 34 H 0.97006 * 120.00034 * 334.99766 * 13 11 10 35 35 H 1.09001 * 109.47438 * 125.02044 * 21 20 19 36 36 H 0.96705 * 113.99788 * 59.99913 * 22 21 20 37 37 H 1.48501 * 109.99793 * 179.97438 * 23 21 20 38 38 H 1.48494 * 110.00207 * 301.31968 * 23 21 20 39 39 H 1.08002 * 123.45197 * 179.75603 * 24 20 19 40 40 H 1.09007 * 113.61646 * 105.46132 * 25 8 7 41 41 H 1.08997 * 113.61768 * 334.56041 * 25 8 7 42 42 H 1.08006 * 119.95288 * 179.70408 * 26 7 6 43 43 H 1.07999 * 120.01721 * 180.27663 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0462 1.2115 0.0000 4 6 3.4333 1.2857 -0.0005 5 9 4.1713 0.1540 -0.0020 6 6 4.0578 2.5199 0.0000 7 6 3.3022 3.6777 0.0005 8 6 3.9848 5.0213 0.0017 9 1 5.0550 4.9522 0.1970 10 6 3.6362 5.8905 -1.2180 11 6 3.5914 7.0875 -0.2536 12 1 2.7799 7.7850 -0.4608 13 7 4.8852 7.7538 -0.0850 14 6 4.9330 9.0486 0.2863 15 8 3.9019 9.6638 0.4817 16 6 6.2316 9.7171 0.4561 17 6 6.3628 11.0208 0.8290 18 17 5.0357 12.0902 1.1592 19 16 8.0069 11.4598 0.9260 20 6 8.5412 9.8557 0.4556 21 6 9.9825 9.4402 0.3101 22 8 10.2509 9.1222 -1.0571 23 14 11.0893 10.8377 0.8513 24 6 7.5008 9.0609 0.2401 25 6 3.2689 6.0774 0.8602 26 6 1.9216 3.6053 0.0062 27 6 1.2922 2.3751 0.0000 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8900 31 1 5.1363 2.5793 -0.0008 32 1 2.6700 5.6516 -1.6625 33 1 4.4371 5.9529 -1.9546 34 1 5.7074 7.2631 -0.2404 35 1 10.1727 8.5648 0.9309 36 1 10.1025 9.8568 -1.6682 37 1 12.5134 10.4403 0.7131 38 1 10.8173 12.0470 0.0335 39 1 7.5931 8.0285 -0.0632 40 1 3.7742 6.2900 1.8023 41 1 2.2023 5.8896 0.9839 42 1 1.3341 4.5116 0.0115 43 1 0.2136 2.3201 -0.0001 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13431040.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:11 Heat of formation + Delta-G solvation = -56.280735 kcal Electronic energy + Delta-G solvation = -31090.455513 eV Core-core repulsion = 26364.134291 eV Total energy + Delta-G solvation = -4726.321222 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 398.059 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -49.86667 -41.71325 -40.96985 -39.97269 -38.89049 -38.08995 -37.80061 -37.00988 -34.38603 -31.85409 -31.70061 -31.14486 -28.44182 -26.99059 -26.64911 -26.50550 -25.13678 -23.81130 -22.59444 -22.28259 -20.86086 -20.24868 -19.47472 -19.35256 -18.12899 -17.98610 -17.73311 -17.57463 -17.18807 -16.98087 -16.49242 -16.25788 -16.08933 -15.97147 -15.92940 -15.76723 -15.65617 -15.24053 -14.94693 -14.71080 -14.50108 -14.32840 -14.01308 -13.92126 -13.69865 -13.60686 -13.35283 -13.05988 -12.98497 -12.92401 -12.60040 -12.48178 -12.35076 -12.18348 -12.11451 -11.79870 -11.79203 -11.45545 -11.24791 -10.98351 -10.72079 -10.15706 -9.95973 -9.87796 -9.65189 -9.11663 -5.03383 -0.62154 -0.17974 0.09212 0.17578 0.49178 0.73189 1.05557 1.19616 1.53225 1.90735 2.13549 2.17483 2.18482 2.47282 3.17933 3.25687 3.48486 3.48887 3.59941 3.72872 3.78389 3.85031 3.90349 3.98389 4.05550 4.17941 4.23265 4.33397 4.33541 4.39184 4.52235 4.54560 4.66054 4.69940 4.79393 4.81501 4.86566 4.90927 4.93225 4.98548 5.05079 5.09327 5.18339 5.19372 5.47098 5.64413 5.65986 6.25826 6.42330 6.46956 7.15935 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.340 6.340 3 C 0.074 3.926 4 C 0.035 3.965 5 F -0.152 7.152 6 C -0.112 4.112 7 C -0.078 4.078 8 C -0.061 4.061 9 H 0.114 0.886 10 C -0.125 4.125 11 C 0.116 3.884 12 H 0.089 0.911 13 N -0.692 5.692 14 C 0.573 3.427 15 O -0.558 6.558 16 C -0.166 4.166 17 C -0.139 4.139 18 Cl 0.003 6.997 19 S 0.260 5.740 20 C -0.225 4.225 21 C -0.027 4.027 22 O -0.535 6.535 23 Si 0.700 3.300 24 C -0.066 4.066 25 C -0.141 4.141 26 C -0.082 4.082 27 C -0.178 4.178 28 H 0.114 0.886 29 H 0.070 0.930 30 H 0.070 0.930 31 H 0.155 0.845 32 H 0.105 0.895 33 H 0.087 0.913 34 H 0.414 0.586 35 H 0.151 0.849 36 H 0.389 0.611 37 H -0.270 1.270 38 H -0.258 1.258 39 H 0.182 0.818 40 H 0.069 0.931 41 H 0.102 0.898 42 H 0.157 0.843 43 H 0.159 0.841 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.482 0.844 0.404 1.753 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.131 7.131 6 C -0.130 4.130 7 C -0.078 4.078 8 C -0.080 4.080 9 H 0.132 0.868 10 C -0.163 4.163 11 C 0.010 3.990 12 H 0.107 0.893 13 N -0.344 5.344 14 C 0.359 3.641 15 O -0.438 6.438 16 C -0.186 4.186 17 C -0.286 4.286 18 Cl 0.032 6.968 19 S 0.525 5.475 20 C -0.343 4.343 21 C -0.140 4.140 22 O -0.343 6.343 23 Si 0.603 3.397 24 C -0.095 4.095 25 C -0.179 4.179 26 C -0.100 4.100 27 C -0.196 4.196 28 H 0.132 0.868 29 H 0.088 0.912 30 H 0.089 0.911 31 H 0.173 0.827 32 H 0.123 0.877 33 H 0.105 0.895 34 H 0.252 0.748 35 H 0.168 0.832 36 H 0.239 0.761 37 H -0.195 1.195 38 H -0.184 1.184 39 H 0.199 0.801 40 H 0.087 0.913 41 H 0.120 0.880 42 H 0.174 0.826 43 H 0.176 0.824 Dipole moment (debyes) X Y Z Total from point charges 2.245 2.467 0.958 3.470 hybrid contribution -1.059 -1.640 -1.428 2.419 sum 1.186 0.826 -0.471 1.520 Atomic orbital electron populations 1.23398 0.75811 1.05721 1.02705 1.86109 1.24019 1.26482 1.88819 1.19329 0.91013 0.86472 1.00416 1.17439 0.86603 0.83296 1.11154 1.91456 1.76824 1.50154 1.94645 1.21116 1.01874 0.89219 1.00821 1.19601 0.93378 0.94193 1.00638 1.21562 1.00303 0.88734 0.97352 0.86839 1.23408 1.04321 0.92506 0.96060 1.21873 0.85947 0.93624 0.97520 0.89255 1.45392 1.09745 1.10278 1.69007 1.17650 0.87667 0.82154 0.76579 1.90859 1.35746 1.65712 1.51433 1.20336 0.95217 0.92995 1.10007 1.25801 0.98217 0.96288 1.08255 1.98427 1.43889 1.61570 1.92941 1.83360 0.90458 1.10344 1.63298 1.24855 1.01159 0.97153 1.11085 1.24465 0.91691 1.10863 0.86952 1.86629 1.89579 1.41972 1.16166 0.94516 0.79450 0.75507 0.90276 1.21150 0.87449 1.01825 0.99074 1.23578 1.02154 0.94445 0.97738 1.21208 0.94194 0.97824 0.96759 1.21420 1.01427 0.90852 1.05946 0.86753 0.91154 0.91093 0.82690 0.87666 0.89451 0.74797 0.83187 0.76066 1.19511 1.18353 0.80120 0.91267 0.87954 0.82595 0.82351 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.24 10.36 -93.17 -0.97 -3.20 16 3 C 0.07 0.39 6.69 22.53 0.15 0.54 16 4 C 0.03 0.23 7.31 22.45 0.16 0.40 16 5 F -0.15 -1.74 17.11 44.97 0.77 -0.97 16 6 C -0.11 -0.08 9.68 22.30 0.22 0.13 16 7 C -0.08 0.22 5.29 -19.86 -0.11 0.12 16 8 C -0.06 0.42 3.85 -11.01 -0.04 0.38 16 9 H 0.11 -1.05 8.09 -2.39 -0.02 -1.07 16 10 C -0.13 0.91 7.29 31.12 0.23 1.14 16 11 C 0.12 -0.40 4.32 45.52 0.20 -0.20 16 12 H 0.09 0.09 7.46 -2.39 -0.02 0.07 16 13 N -0.69 2.13 5.24 -443.65 -2.33 -0.19 16 14 C 0.57 2.34 7.79 86.55 0.67 3.02 16 15 O -0.56 -6.73 14.51 -4.19 -0.06 -6.79 16 16 C -0.17 -0.20 5.98 -19.84 -0.12 -0.32 16 17 C -0.14 -0.40 6.87 67.35 0.46 0.06 16 18 Cl 0.00 0.02 27.20 -2.72 -0.07 -0.05 16 19 S 0.26 -0.79 20.19 -56.49 -1.14 -1.93 16 20 C -0.23 1.26 5.65 24.52 0.14 1.40 16 21 C -0.03 0.20 2.94 71.24 0.21 0.41 16 22 O -0.54 2.46 12.88 -148.98 -1.92 0.54 16 23 Si 0.70 -4.20 30.92 68.60 2.12 -2.08 16 24 C -0.07 0.34 9.75 22.70 0.22 0.56 16 25 C -0.14 0.69 7.25 31.12 0.23 0.92 16 26 C -0.08 0.28 8.62 22.26 0.19 0.47 16 27 C -0.18 0.16 9.04 22.36 0.20 0.37 16 28 H 0.11 -0.63 8.14 -2.39 -0.02 -0.65 16 29 H 0.07 -0.39 7.66 -2.39 -0.02 -0.41 16 30 H 0.07 -0.41 7.66 -2.39 -0.02 -0.43 16 31 H 0.16 -0.47 8.05 -2.91 -0.02 -0.50 16 32 H 0.10 -0.83 7.73 -2.39 -0.02 -0.85 16 33 H 0.09 -0.73 8.14 -2.39 -0.02 -0.75 16 34 H 0.41 -3.70 7.24 -92.70 -0.67 -4.37 16 35 H 0.15 -1.57 7.96 -2.39 -0.02 -1.59 16 36 H 0.39 -3.69 8.70 -74.05 -0.64 -4.34 16 37 H -0.27 -0.23 7.11 99.48 0.71 0.48 16 38 H -0.26 0.60 7.11 99.48 0.71 1.31 16 39 H 0.18 -1.90 7.10 -2.91 -0.02 -1.93 16 40 H 0.07 -0.19 8.14 -2.38 -0.02 -0.21 16 41 H 0.10 -0.62 6.30 -2.39 -0.02 -0.63 16 42 H 0.16 -1.27 6.64 -2.91 -0.02 -1.29 16 43 H 0.16 -0.91 6.30 -2.91 -0.02 -0.93 16 Total: 0.00 -22.67 392.10 0.36 -22.31 By element: Atomic # 1 Polarization: -17.93 SS G_CDS: -0.17 Total: -18.10 kcal Atomic # 6 Polarization: 6.33 SS G_CDS: 4.13 Total: 10.46 kcal Atomic # 7 Polarization: 2.13 SS G_CDS: -2.33 Total: -0.19 kcal Atomic # 8 Polarization: -6.50 SS G_CDS: -2.95 Total: -9.45 kcal Atomic # 9 Polarization: -1.74 SS G_CDS: 0.77 Total: -0.97 kcal Atomic # 14 Polarization: -4.20 SS G_CDS: 2.12 Total: -2.08 kcal Atomic # 16 Polarization: -0.79 SS G_CDS: -1.14 Total: -1.93 kcal Atomic # 17 Polarization: 0.02 SS G_CDS: -0.07 Total: -0.05 kcal Total: -22.67 0.36 -22.31 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13431040.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -33.971 kcal (2) G-P(sol) polarization free energy of solvation -22.674 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.645 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.365 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.310 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.281 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds