Wall clock time and date at job start Tue Mar 9 2021 12:59:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35953 * 117.00122 * 2 1 4 4 C 1.38915 * 120.06108 * 179.97438 * 3 2 1 5 5 F 1.35099 * 120.04739 * 0.04696 * 4 3 2 6 6 C 1.38332 * 119.90133 * 179.76424 * 4 3 2 7 7 C 1.38253 * 120.03068 * 0.50868 * 6 4 3 8 8 C 1.50706 * 119.93948 * 179.76694 * 7 6 4 9 9 H 1.08997 * 112.84952 * 190.92385 * 8 7 6 10 10 C 1.53779 * 113.60955 * 322.22690 * 8 7 6 11 11 C 1.53786 * 87.07997 * 139.98049 * 10 8 7 12 12 H 1.08999 * 113.61349 * 220.01851 * 11 10 8 13 13 N 1.46500 * 113.61441 * 89.11741 * 11 10 8 14 14 C 1.34766 * 120.00324 * 107.50498 * 13 11 10 15 15 O 1.21619 * 119.99919 * 359.97438 * 14 13 11 16 16 C 1.47377 * 120.00266 * 179.97438 * 14 13 11 17 17 C 1.36419 * 127.19273 * 359.68420 * 16 14 13 18 18 O 1.33648 * 108.40000 * 179.83606 * 17 16 14 19 19 C 1.34220 * 110.90647 * 0.44656 * 18 17 16 20 20 C 1.50703 * 125.43631 * 179.72079 * 19 18 17 21 21 O 1.42900 * 109.46615 * 120.00243 * 20 19 18 22 22 Si 1.86299 * 109.47309 * 0.02562 * 20 19 18 23 23 C 1.34173 * 109.12137 * 359.72919 * 19 18 17 24 24 C 1.53781 * 113.61422 * 59.72460 * 8 7 6 25 25 C 1.38267 * 120.12803 * 359.48911 * 7 6 4 26 26 C 1.38180 * 120.08947 * 0.25989 * 25 7 6 27 27 H 1.09007 * 109.47262 * 300.00483 * 1 2 3 28 28 H 1.08998 * 109.46942 * 60.00418 * 1 2 3 29 29 H 1.08997 * 109.47394 * 180.02562 * 1 2 3 30 30 H 1.07996 * 119.98437 * 180.27487 * 6 4 3 31 31 H 1.08997 * 113.61483 * 254.52729 * 10 8 7 32 32 H 1.09001 * 113.61530 * 25.43581 * 10 8 7 33 33 H 0.97006 * 119.99566 * 287.50122 * 13 11 10 34 34 H 1.07999 * 125.79864 * 359.97438 * 17 16 14 35 35 H 1.08992 * 109.47259 * 240.00161 * 20 19 18 36 36 H 0.96704 * 114.00111 * 180.02562 * 21 20 19 37 37 H 1.48503 * 109.99625 * 298.67986 * 22 20 19 38 38 H 1.48500 * 110.00431 * 59.99120 * 22 20 19 39 39 H 1.08008 * 127.01872 * 180.02562 * 23 19 18 40 40 H 1.09001 * 113.61397 * 334.57071 * 24 8 7 41 41 H 1.08994 * 113.61764 * 105.46954 * 24 8 7 42 42 H 1.07991 * 119.95429 * 180.23059 * 25 7 6 43 43 H 1.08008 * 120.01247 * 179.97438 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0462 1.2113 0.0000 4 6 3.4334 1.2855 0.0005 5 9 4.1713 0.1538 0.0001 6 6 4.0580 2.5197 -0.0044 7 6 3.3025 3.6776 0.0008 8 6 3.9851 5.0212 0.0007 9 1 3.2983 5.8449 0.1953 10 6 5.2604 5.0641 0.8589 11 6 5.8868 5.9194 -0.2551 12 1 6.9283 5.6729 -0.4615 13 7 5.6639 7.3575 -0.0864 14 6 6.6824 8.1584 0.2845 15 8 7.7865 7.6872 0.4797 16 6 6.4583 9.6051 0.4537 17 6 5.2906 10.2859 0.2693 18 8 5.5103 11.5784 0.5286 19 6 6.7910 11.7871 0.8717 20 6 7.3946 13.1222 1.2244 21 8 7.9101 13.0747 2.5563 22 14 6.0869 14.4442 1.1120 23 6 7.4479 10.6174 0.8503 24 6 4.8927 5.2509 -1.2193 25 6 1.9217 3.6053 0.0002 26 6 1.2924 2.3751 -0.0001 27 1 -0.3634 0.5139 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3634 -1.0276 0.0005 30 1 5.1363 2.5789 -0.0085 31 1 5.1350 5.5978 1.8009 32 1 5.7365 4.0914 0.9825 33 1 4.7832 7.7333 -0.2417 34 1 4.3481 9.8534 -0.0326 35 1 8.2030 13.3503 0.5299 36 1 8.3144 13.9022 2.8514 37 1 5.5648 14.5253 -0.2759 38 1 4.9791 14.1445 2.0545 39 1 8.4908 10.4531 1.0784 40 1 5.2683 4.3293 -1.6638 41 1 4.4705 5.9354 -1.9549 42 1 1.3343 4.5114 0.0005 43 1 0.2137 2.3200 -0.0001 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_13456056.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:14 Heat of formation + Delta-G solvation = -70.616848 kcal Electronic energy + Delta-G solvation = -28999.723187 eV Core-core repulsion = 24508.509418 eV Total energy + Delta-G solvation = -4491.213769 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 348.125 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -49.90175 -43.85418 -41.66844 -40.84461 -39.68333 -37.95423 -37.90039 -34.81431 -33.88237 -32.05621 -31.78115 -31.09504 -28.51828 -26.85696 -26.72118 -26.08711 -24.79980 -23.84265 -22.62281 -22.36736 -21.13037 -20.35294 -19.41498 -18.95413 -18.64614 -18.11064 -17.81569 -17.47077 -17.27752 -17.21334 -16.98057 -16.28811 -16.11563 -16.08641 -15.88370 -15.79554 -15.62606 -15.36820 -15.10310 -14.63433 -14.29319 -14.19855 -14.16155 -13.98901 -13.75492 -13.58473 -13.49475 -13.12470 -12.89014 -12.70491 -12.25375 -12.18034 -12.15914 -12.06769 -11.50401 -11.33416 -11.26797 -11.07233 -10.51659 -10.21904 -9.97812 -9.84149 -9.14498 -5.02449 0.07284 0.12734 0.15021 0.71343 1.19457 1.51838 1.70489 1.92289 2.02063 2.14568 2.16344 2.44908 3.15479 3.29544 3.40704 3.42718 3.62604 3.66274 3.69209 3.70074 3.84632 3.90443 3.95865 4.18043 4.22345 4.24302 4.31384 4.32557 4.35351 4.43536 4.48781 4.61628 4.67439 4.75349 4.76457 4.82623 4.84909 4.89372 4.99828 5.03881 5.06037 5.08525 5.16538 5.42005 5.58336 5.63094 5.72144 6.24271 6.39751 6.82398 7.07366 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.075 3.925 4 C 0.034 3.966 5 F -0.153 7.153 6 C -0.115 4.115 7 C -0.080 4.080 8 C -0.056 4.056 9 H 0.128 0.872 10 C -0.148 4.148 11 C 0.113 3.887 12 H 0.083 0.917 13 N -0.690 5.690 14 C 0.591 3.409 15 O -0.582 6.582 16 C -0.264 4.264 17 C 0.058 3.942 18 O -0.184 6.184 19 C -0.029 4.029 20 C -0.049 4.049 21 O -0.564 6.564 22 Si 0.818 3.182 23 C -0.146 4.146 24 C -0.124 4.124 25 C -0.076 4.076 26 C -0.179 4.179 27 H 0.071 0.929 28 H 0.072 0.928 29 H 0.114 0.886 30 H 0.148 0.852 31 H 0.070 0.930 32 H 0.092 0.908 33 H 0.417 0.583 34 H 0.265 0.735 35 H 0.119 0.881 36 H 0.413 0.587 37 H -0.287 1.287 38 H -0.302 1.302 39 H 0.151 0.849 40 H 0.097 0.903 41 H 0.097 0.903 42 H 0.165 0.835 43 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.943 8.061 -1.897 10.806 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.028 3.972 4 C 0.014 3.986 5 F -0.132 7.132 6 C -0.134 4.134 7 C -0.081 4.081 8 C -0.074 4.074 9 H 0.146 0.854 10 C -0.186 4.186 11 C 0.007 3.993 12 H 0.101 0.899 13 N -0.341 5.341 14 C 0.380 3.620 15 O -0.463 6.463 16 C -0.268 4.268 17 C -0.011 4.011 18 O -0.081 6.081 19 C -0.076 4.076 20 C -0.157 4.157 21 O -0.376 6.376 22 Si 0.722 3.278 23 C -0.165 4.165 24 C -0.162 4.162 25 C -0.094 4.094 26 C -0.197 4.197 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.132 0.868 30 H 0.165 0.835 31 H 0.089 0.911 32 H 0.110 0.890 33 H 0.255 0.745 34 H 0.281 0.719 35 H 0.136 0.864 36 H 0.267 0.733 37 H -0.214 1.214 38 H -0.230 1.230 39 H 0.169 0.831 40 H 0.116 0.884 41 H 0.115 0.885 42 H 0.183 0.817 43 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -7.291 7.293 -1.987 10.502 hybrid contribution 0.236 -1.379 0.005 1.399 sum -7.055 5.915 -1.982 9.417 Atomic orbital electron populations 1.23407 0.75720 1.05739 1.02776 1.86110 1.24109 1.26513 1.88788 1.19334 0.90889 0.86607 1.00320 1.17423 0.86714 0.83171 1.11284 1.91451 1.76907 1.50190 1.94661 1.21012 1.01657 0.89550 1.01181 1.19607 0.93489 0.94114 1.00856 1.21590 0.95196 0.93955 0.96648 0.85398 1.23595 0.96386 1.00640 0.98001 1.21886 1.00321 0.79238 0.97806 0.89907 1.45287 1.12541 1.07204 1.69112 1.17407 0.84086 0.84932 0.75597 1.90795 1.25987 1.76832 1.52669 1.21510 0.95978 0.94171 1.15168 1.25365 1.00172 0.79192 0.96408 1.83731 1.28553 1.28691 1.67119 1.21693 0.81660 0.97668 1.06618 1.24150 1.06892 0.96299 0.88400 1.86414 1.80500 1.43087 1.27587 0.93949 0.74945 0.81692 0.77229 1.22594 1.00891 0.90447 1.02605 1.23396 0.94956 1.01583 0.96254 1.21320 0.93781 0.98131 0.96173 1.21471 1.01518 0.90866 1.05884 0.91081 0.90962 0.86807 0.83453 0.91131 0.88981 0.74455 0.71920 0.86369 0.73317 1.21389 1.22986 0.83111 0.88409 0.88473 0.81739 0.82104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.06 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.29 10.36 -93.01 -0.96 -3.25 16 3 C 0.07 0.40 6.69 22.53 0.15 0.55 16 4 C 0.03 0.26 7.31 22.45 0.16 0.42 16 5 F -0.15 -1.95 17.11 44.97 0.77 -1.18 16 6 C -0.12 -0.22 8.57 22.30 0.19 -0.03 16 7 C -0.08 0.23 5.29 -19.85 -0.11 0.13 16 8 C -0.06 0.39 3.86 -11.01 -0.04 0.35 16 9 H 0.13 -1.54 8.09 -2.39 -0.02 -1.56 16 10 C -0.15 0.37 7.25 31.12 0.23 0.59 16 11 C 0.11 -0.16 4.32 45.52 0.20 0.04 16 12 H 0.08 0.36 7.47 -2.39 -0.02 0.34 16 13 N -0.69 1.59 5.25 -443.34 -2.33 -0.74 16 14 C 0.59 4.10 7.81 86.65 0.68 4.78 16 15 O -0.58 -9.95 16.58 -4.09 -0.07 -10.02 16 16 C -0.26 -1.27 6.31 -18.99 -0.12 -1.39 16 17 C 0.06 -0.13 11.61 67.39 0.78 0.65 16 18 O -0.18 -0.60 8.89 4.46 0.04 -0.56 16 19 C -0.03 -0.14 6.24 24.76 0.15 0.01 16 20 C -0.05 0.08 2.97 71.24 0.21 0.29 16 21 O -0.56 0.59 12.84 -148.98 -1.91 -1.32 16 22 Si 0.82 -3.19 32.08 68.60 2.20 -0.99 16 23 C -0.15 -1.18 10.88 23.65 0.26 -0.92 16 24 C -0.12 0.81 7.29 31.12 0.23 1.04 16 25 C -0.08 0.35 9.70 22.26 0.22 0.57 16 26 C -0.18 0.29 9.04 22.36 0.20 0.49 16 27 H 0.07 -0.43 7.66 -2.38 -0.02 -0.45 16 28 H 0.07 -0.45 7.66 -2.39 -0.02 -0.47 16 29 H 0.11 -0.65 8.14 -2.39 -0.02 -0.67 16 30 H 0.15 -0.01 6.67 -2.91 -0.02 -0.03 16 31 H 0.07 -0.05 8.14 -2.39 -0.02 -0.07 16 32 H 0.09 -0.13 6.32 -2.39 -0.02 -0.15 16 33 H 0.42 -4.45 7.67 -92.70 -0.71 -5.16 16 34 H 0.27 -3.87 7.47 -2.91 -0.02 -3.89 16 35 H 0.12 -0.79 7.96 -2.39 -0.02 -0.81 16 36 H 0.41 -5.28 8.74 -74.05 -0.65 -5.92 16 37 H -0.29 -0.48 7.11 99.48 0.71 0.22 16 38 H -0.30 -1.41 7.11 99.48 0.71 -0.71 16 39 H 0.15 1.45 8.06 -2.91 -0.02 1.42 16 40 H 0.10 -0.52 7.71 -2.39 -0.02 -0.54 16 41 H 0.10 -0.93 8.14 -2.39 -0.02 -0.95 16 42 H 0.17 -1.85 8.05 -2.92 -0.02 -1.87 16 43 H 0.16 -1.10 6.30 -2.91 -0.02 -1.12 16 Total: 0.00 -33.81 372.54 2.00 -31.81 By element: Atomic # 1 Polarization: -22.13 SS G_CDS: -0.24 Total: -22.37 kcal Atomic # 6 Polarization: 4.12 SS G_CDS: 4.50 Total: 8.62 kcal Atomic # 7 Polarization: 1.59 SS G_CDS: -2.33 Total: -0.74 kcal Atomic # 8 Polarization: -12.25 SS G_CDS: -2.90 Total: -15.15 kcal Atomic # 9 Polarization: -1.95 SS G_CDS: 0.77 Total: -1.18 kcal Atomic # 14 Polarization: -3.19 SS G_CDS: 2.20 Total: -0.99 kcal Total: -33.81 2.00 -31.81 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_13456056.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.805 kcal (2) G-P(sol) polarization free energy of solvation -33.814 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.619 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.002 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.812 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.617 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds