Wall clock time and date at job start Tue Mar 9 2021 12:59:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35956 * 117.00104 * 2 1 4 4 C 1.38911 * 120.06246 * 179.97438 * 3 2 1 5 5 F 1.35100 * 120.04812 * 0.05137 * 4 3 2 6 6 C 1.38335 * 119.90496 * 179.77182 * 4 3 2 7 7 C 1.38248 * 120.02441 * 0.51149 * 6 4 3 8 8 C 1.50700 * 119.93281 * 179.76790 * 7 6 4 9 9 H 1.09004 * 112.84949 * 168.52251 * 8 7 6 10 10 C 1.53781 * 113.61765 * 299.72403 * 8 7 6 11 11 C 1.53782 * 87.08386 * 140.06374 * 10 8 7 12 12 H 1.08998 * 113.61498 * 219.93236 * 11 10 8 13 13 N 1.46504 * 113.61100 * 89.11919 * 11 10 8 14 14 C 1.34771 * 119.99956 * 155.00496 * 13 11 10 15 15 O 1.21628 * 119.99837 * 359.97438 * 14 13 11 16 16 C 1.47260 * 120.00328 * 179.97438 * 14 13 11 17 17 C 1.36337 * 126.97027 * 180.17663 * 16 14 13 18 18 C 1.50992 * 126.79771 * 0.05779 * 17 16 14 19 19 C 1.53395 * 108.25984 * 164.66212 * 18 17 16 20 20 C 1.53161 * 109.04146 * 48.45351 * 19 18 17 21 21 C 1.53133 * 109.52234 * 290.42315 * 20 19 18 22 22 N 1.35213 * 108.65458 * 180.32776 * 17 16 14 23 23 C 1.36416 * 109.90357 * 359.67555 * 22 17 16 24 24 C 1.50703 * 125.49371 * 180.02562 * 23 22 17 25 25 O 1.42902 * 109.47069 * 29.97364 * 24 23 22 26 26 Si 1.86302 * 109.47084 * 149.97586 * 24 23 22 27 27 C 1.34496 * 109.01399 * 0.03102 * 23 22 17 28 28 C 1.53782 * 113.69065 * 37.26194 * 8 7 6 29 29 C 1.38256 * 120.13052 * 359.48556 * 7 6 4 30 30 C 1.38180 * 120.09770 * 0.26342 * 29 7 6 31 31 H 1.08994 * 109.47016 * 179.97438 * 1 2 3 32 32 H 1.09001 * 109.46927 * 299.99533 * 1 2 3 33 33 H 1.08999 * 109.46835 * 59.99363 * 1 2 3 34 34 H 1.07998 * 119.98498 * 180.27960 * 6 4 3 35 35 H 1.08996 * 113.60918 * 25.51264 * 10 8 7 36 36 H 1.09002 * 113.61027 * 254.61693 * 10 8 7 37 37 H 0.96998 * 120.00248 * 334.99587 * 13 11 10 38 38 H 1.09007 * 109.70691 * 44.97278 * 18 17 16 39 39 H 1.09002 * 109.74228 * 284.37763 * 18 17 16 40 40 H 1.09000 * 109.54234 * 288.59262 * 19 18 17 41 41 H 1.08996 * 109.61964 * 168.36965 * 19 18 17 42 42 H 1.09001 * 109.46574 * 170.40709 * 20 19 18 43 43 H 1.09006 * 109.46076 * 50.43386 * 20 19 18 44 44 H 1.09000 * 109.56312 * 291.18271 * 21 20 19 45 45 H 1.09001 * 109.56938 * 170.83651 * 21 20 19 46 46 H 1.08998 * 109.47020 * 269.97203 * 24 23 22 47 47 H 0.96696 * 113.99678 * 60.00194 * 25 24 23 48 48 H 1.48497 * 110.00172 * 58.67885 * 26 24 23 49 49 H 1.48500 * 109.99811 * 180.02562 * 26 24 23 50 50 H 1.08002 * 126.81658 * 179.97438 * 27 23 22 51 51 H 1.08996 * 113.62098 * 105.46149 * 28 8 7 52 52 H 1.08994 * 113.61646 * 334.55108 * 28 8 7 53 53 H 1.08002 * 119.95256 * 180.23257 * 29 7 6 54 54 H 1.07995 * 120.01836 * 179.97438 * 30 29 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2114 0.0000 4 6 3.4334 1.2856 0.0005 5 9 4.1714 0.1539 0.0000 6 6 4.0581 2.5198 -0.0042 7 6 3.3025 3.6775 0.0011 8 6 3.9852 5.0211 0.0012 9 1 3.2985 5.8448 -0.1942 10 6 4.8919 5.2513 1.2217 11 6 5.8857 5.9215 0.2584 12 1 6.9275 5.6773 0.4661 13 7 5.6612 7.3594 0.0903 14 6 6.6789 8.1617 -0.2798 15 8 7.7839 7.6919 -0.4739 16 6 6.4532 9.6070 -0.4493 17 6 7.3729 10.5426 -0.8199 18 6 8.8288 10.3024 -1.1402 19 6 9.3717 11.5398 -1.8662 20 6 8.9669 12.7944 -1.0864 21 6 7.4548 13.0049 -1.2051 22 7 6.7701 11.7524 -0.8528 23 6 5.4549 11.6253 -0.5136 24 6 4.4576 12.7527 -0.4388 25 8 4.8161 13.7688 -1.3775 26 14 2.7577 12.1060 -0.8424 27 6 5.1917 10.3316 -0.2566 28 6 5.2609 5.0660 -0.8564 29 6 1.9218 3.6052 0.0006 30 6 1.2924 2.3751 0.0001 31 1 -0.3633 -1.0276 -0.0005 32 1 -0.3633 0.5138 0.8900 33 1 -0.3633 0.5139 -0.8899 34 1 5.1364 2.5790 -0.0084 35 1 5.2682 4.3299 1.6660 36 1 4.4684 5.9350 1.9575 37 1 4.7800 7.7341 0.2453 38 1 8.9242 9.4276 -1.7835 39 1 9.3873 10.1429 -0.2178 40 1 8.9538 11.5851 -2.8719 41 1 10.4585 11.4821 -1.9252 42 1 9.4874 13.6602 -1.4958 43 1 9.2352 12.6721 -0.0370 44 1 7.2041 13.2823 -2.2290 45 1 7.1417 13.7961 -0.5238 46 1 4.4575 13.1714 0.5676 47 1 4.8364 13.4664 -2.2957 48 1 2.3863 11.0265 0.1072 49 1 1.7652 13.2083 -0.7727 50 1 4.2418 9.9105 0.0379 51 1 5.1354 5.6001 -1.7982 52 1 5.7382 4.0940 -0.9802 53 1 1.3343 4.5115 0.0010 54 1 0.2138 2.3201 0.0001 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER m_22_9824364_16915396.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:59:30 Heat of formation + Delta-G solvation = -49.858742 kcal Electronic energy + Delta-G solvation = -37476.858007 eV Core-core repulsion = 32489.424042 eV Total energy + Delta-G solvation = -4987.433965 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 401.184 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -49.87075 -42.78237 -41.53581 -40.69365 -39.48083 -37.97541 -37.81094 -36.83131 -34.31660 -33.43898 -31.74873 -31.30097 -31.10492 -29.41277 -28.44679 -26.69210 -26.64244 -25.77541 -24.61328 -24.13762 -23.69754 -22.52604 -21.69978 -21.23022 -20.26366 -19.51371 -19.38796 -18.88188 -18.01032 -17.76974 -17.25476 -17.18384 -16.99604 -16.75451 -16.56222 -16.16604 -16.08482 -15.83254 -15.75892 -15.54842 -15.46027 -15.28084 -15.16005 -15.07485 -14.83808 -14.66227 -14.54590 -14.33141 -14.05909 -13.89510 -13.87204 -13.51977 -13.43327 -13.21493 -13.05765 -12.84749 -12.64543 -12.31913 -12.19924 -12.13491 -12.09272 -11.98771 -11.96878 -11.80627 -11.73741 -11.43510 -11.19421 -10.89363 -10.67300 -10.06372 -9.93888 -9.55851 -9.11210 -9.03749 -4.89422 0.10533 0.18002 0.72820 1.09061 1.41243 1.69532 1.82920 2.05505 2.18964 2.39135 2.47901 2.54236 3.18859 3.36795 3.49543 3.49877 3.59515 3.67998 3.70834 3.74216 3.76489 3.81528 3.83908 3.95001 4.02171 4.16252 4.22004 4.28908 4.34194 4.34776 4.34975 4.36666 4.42337 4.46314 4.52562 4.63004 4.67404 4.69944 4.76151 4.80493 4.81089 4.82322 4.88920 4.92276 4.93464 4.99327 5.03800 5.06620 5.10497 5.13223 5.18689 5.23583 5.26809 5.52285 5.64922 5.70414 5.73958 6.05177 6.23216 6.27143 6.63540 6.68271 7.37382 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.341 6.341 3 C 0.074 3.926 4 C 0.034 3.966 5 F -0.153 7.153 6 C -0.115 4.115 7 C -0.079 4.079 8 C -0.056 4.056 9 H 0.124 0.876 10 C -0.128 4.128 11 C 0.117 3.883 12 H 0.082 0.918 13 N -0.697 5.697 14 C 0.591 3.409 15 O -0.588 6.588 16 C -0.255 4.255 17 C 0.106 3.894 18 C -0.054 4.054 19 C -0.123 4.123 20 C -0.136 4.136 21 C 0.105 3.895 22 N -0.424 5.424 23 C -0.009 4.009 24 C -0.048 4.048 25 O -0.553 6.553 26 Si 0.797 3.203 27 C -0.170 4.170 28 C -0.144 4.144 29 C -0.077 4.077 30 C -0.178 4.178 31 H 0.114 0.886 32 H 0.071 0.929 33 H 0.071 0.929 34 H 0.148 0.852 35 H 0.096 0.904 36 H 0.089 0.911 37 H 0.412 0.588 38 H 0.082 0.918 39 H 0.075 0.925 40 H 0.074 0.926 41 H 0.087 0.913 42 H 0.108 0.892 43 H 0.063 0.937 44 H 0.104 0.896 45 H 0.095 0.905 46 H 0.110 0.890 47 H 0.394 0.606 48 H -0.269 1.269 49 H -0.296 1.296 50 H 0.166 0.834 51 H 0.072 0.928 52 H 0.091 0.909 53 H 0.163 0.837 54 H 0.162 0.838 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.942 6.303 -2.325 8.969 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.255 6.255 3 C 0.028 3.972 4 C 0.015 3.985 5 F -0.132 7.132 6 C -0.133 4.133 7 C -0.079 4.079 8 C -0.074 4.074 9 H 0.142 0.858 10 C -0.166 4.166 11 C 0.011 3.989 12 H 0.100 0.900 13 N -0.348 5.348 14 C 0.382 3.618 15 O -0.470 6.470 16 C -0.264 4.264 17 C -0.013 4.013 18 C -0.092 4.092 19 C -0.160 4.160 20 C -0.174 4.174 21 C -0.014 4.014 22 N -0.100 5.100 23 C -0.118 4.118 24 C -0.158 4.158 25 O -0.360 6.360 26 Si 0.699 3.301 27 C -0.194 4.194 28 C -0.183 4.183 29 C -0.095 4.095 30 C -0.197 4.197 31 H 0.132 0.868 32 H 0.090 0.910 33 H 0.090 0.910 34 H 0.166 0.834 35 H 0.115 0.885 36 H 0.107 0.893 37 H 0.249 0.751 38 H 0.100 0.900 39 H 0.094 0.906 40 H 0.093 0.907 41 H 0.105 0.895 42 H 0.127 0.873 43 H 0.082 0.918 44 H 0.122 0.878 45 H 0.113 0.887 46 H 0.128 0.872 47 H 0.244 0.756 48 H -0.195 1.195 49 H -0.224 1.224 50 H 0.183 0.817 51 H 0.090 0.910 52 H 0.110 0.890 53 H 0.181 0.819 54 H 0.179 0.821 Dipole moment (debyes) X Y Z Total from point charges -5.718 6.322 -1.717 8.695 hybrid contribution 0.291 -0.348 0.696 0.831 sum -5.427 5.974 -1.020 8.135 Atomic orbital electron populations 1.23404 0.75749 1.05717 1.02769 1.86110 1.24084 1.26489 1.88815 1.19320 0.90881 0.86576 1.00392 1.17408 0.86695 0.83145 1.11268 1.91451 1.76901 1.50164 1.94664 1.21006 1.01662 0.89504 1.01169 1.19604 0.93489 0.94113 1.00713 1.21557 0.95315 0.93809 0.96749 0.85836 1.23399 0.95455 1.01429 0.96331 1.21800 0.99902 0.79843 0.97379 0.90014 1.45302 1.12905 1.06840 1.69766 1.17576 0.83635 0.85527 0.75112 1.90744 1.25502 1.77203 1.53558 1.19923 0.95554 0.92105 1.18863 1.20525 0.95496 0.84483 1.00749 1.20432 0.87831 0.99549 1.01382 1.21691 1.02392 0.92779 0.99161 1.21944 0.93878 0.99993 1.01569 1.22298 0.92429 0.83242 1.03463 1.44039 1.07749 1.07135 1.51110 1.20961 0.85164 0.96581 1.09137 1.25027 1.06095 0.88490 0.96152 1.86462 1.92397 1.36390 1.20761 0.93146 0.70139 0.77671 0.89116 1.21934 0.97727 0.91573 1.08165 1.23561 0.96081 1.00566 0.98053 1.21313 0.93806 0.98127 0.96263 1.21457 1.01493 0.90827 1.05886 0.86805 0.91038 0.91041 0.83417 0.88526 0.89272 0.75063 0.89963 0.90633 0.90745 0.89484 0.87317 0.91848 0.87817 0.88668 0.87220 0.75616 1.19466 1.22367 0.81680 0.90952 0.89022 0.81899 0.82104 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.05 9.81 113.37 1.11 1.06 16 2 O -0.34 -2.39 10.36 -93.05 -0.96 -3.35 16 3 C 0.07 0.43 6.69 22.53 0.15 0.59 16 4 C 0.03 0.28 7.31 22.45 0.16 0.44 16 5 F -0.15 -1.99 17.11 44.97 0.77 -1.22 16 6 C -0.11 -0.31 8.60 22.30 0.19 -0.12 16 7 C -0.08 0.13 5.29 -19.86 -0.11 0.03 16 8 C -0.06 0.28 3.85 -11.01 -0.04 0.24 16 9 H 0.12 -1.12 8.09 -2.39 -0.02 -1.14 16 10 C -0.13 0.51 7.29 31.12 0.23 0.74 16 11 C 0.12 0.06 4.33 45.52 0.20 0.25 16 12 H 0.08 0.46 7.46 -2.39 -0.02 0.44 16 13 N -0.70 -0.57 5.26 -443.44 -2.33 -2.91 16 14 C 0.59 4.64 7.81 86.62 0.68 5.31 16 15 O -0.59 -8.98 14.95 -4.12 -0.06 -9.05 16 16 C -0.25 -1.34 6.28 -19.12 -0.12 -1.46 16 17 C 0.11 0.48 6.57 41.69 0.27 0.75 16 18 C -0.05 -0.20 5.31 30.07 0.16 -0.04 16 19 C -0.12 0.32 5.98 30.78 0.18 0.50 16 20 C -0.14 0.65 5.92 30.69 0.18 0.83 16 21 C 0.11 -0.46 5.32 86.32 0.46 0.00 16 22 N -0.42 -0.11 3.11 -493.59 -1.54 -1.65 16 23 C -0.01 0.01 6.15 40.99 0.25 0.26 16 24 C -0.05 0.20 2.99 71.24 0.21 0.41 16 25 O -0.55 2.75 10.68 -148.98 -1.59 1.16 16 26 Si 0.80 -5.00 31.29 68.60 2.15 -2.85 16 27 C -0.17 0.03 9.09 23.64 0.21 0.25 16 28 C -0.14 0.20 7.25 31.12 0.23 0.42 16 29 C -0.08 0.27 9.70 22.26 0.22 0.49 16 30 C -0.18 0.16 9.04 22.36 0.20 0.37 16 31 H 0.11 -0.62 8.14 -2.39 -0.02 -0.64 16 32 H 0.07 -0.42 7.66 -2.39 -0.02 -0.44 16 33 H 0.07 -0.42 7.66 -2.39 -0.02 -0.43 16 34 H 0.15 0.10 6.64 -2.91 -0.02 0.08 16 35 H 0.10 -0.31 7.73 -2.39 -0.02 -0.33 16 36 H 0.09 -0.51 8.14 -2.39 -0.02 -0.53 16 37 H 0.41 -1.96 7.83 -92.71 -0.73 -2.69 16 38 H 0.08 0.57 7.43 -2.38 -0.02 0.56 16 39 H 0.08 0.41 8.14 -2.39 -0.02 0.39 16 40 H 0.07 -0.25 8.12 -2.39 -0.02 -0.27 16 41 H 0.09 -0.35 8.14 -2.39 -0.02 -0.37 16 42 H 0.11 -0.92 8.14 -2.39 -0.02 -0.94 16 43 H 0.06 -0.14 8.11 -2.38 -0.02 -0.16 16 44 H 0.10 -0.81 7.94 -2.39 -0.02 -0.83 16 45 H 0.10 -0.36 7.69 -2.39 -0.02 -0.38 16 46 H 0.11 -0.32 7.96 -2.39 -0.02 -0.33 16 47 H 0.39 -4.66 8.63 -74.06 -0.64 -5.30 16 48 H -0.27 0.94 6.77 99.48 0.67 1.62 16 49 H -0.30 -0.32 7.11 99.48 0.71 0.39 16 50 H 0.17 -0.83 6.30 -2.91 -0.02 -0.85 16 51 H 0.07 0.00 8.14 -2.39 -0.02 -0.02 16 52 H 0.09 -0.07 6.30 -2.39 -0.02 -0.09 16 53 H 0.16 -1.59 8.05 -2.91 -0.02 -1.62 16 54 H 0.16 -1.01 6.30 -2.91 -0.02 -1.03 16 Total: 0.00 -24.49 431.98 1.06 -23.43 By element: Atomic # 1 Polarization: -14.51 SS G_CDS: -0.40 Total: -14.91 kcal Atomic # 6 Polarization: 6.30 SS G_CDS: 5.03 Total: 11.34 kcal Atomic # 7 Polarization: -0.68 SS G_CDS: -3.87 Total: -4.55 kcal Atomic # 8 Polarization: -8.62 SS G_CDS: -2.62 Total: -11.23 kcal Atomic # 9 Polarization: -1.99 SS G_CDS: 0.77 Total: -1.22 kcal Atomic # 14 Polarization: -5.00 SS G_CDS: 2.15 Total: -2.85 kcal Total: -24.49 1.06 -23.43 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. m_22_9824364_16915396.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -26.431 kcal (2) G-P(sol) polarization free energy of solvation -24.492 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -50.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.064 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.428 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.859 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds